Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F03
(632 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 182 2e-46
SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.) 169 2e-42
SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 3e-33
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 137 6e-33
SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19) 98 6e-21
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 91 5e-19
SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24) 89 4e-18
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 86 2e-17
SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05) 77 9e-15
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2) 37 0.012
SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_24760| Best HMM Match : PT (HMM E-Value=0.17) 31 0.59
SB_6387| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_3760| Best HMM Match : SVA (HMM E-Value=0.19) 30 1.4
SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_40118| Best HMM Match : DREPP (HMM E-Value=0.085) 29 2.4
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 28 7.2
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 182 bits (444), Expect = 2e-46
Identities = 79/106 (74%), Positives = 93/106 (87%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
FM QGGDFT HNGTGGKSIYG KFEDENF LKHTG GVLSMAN+G +TNGSQFF+TT KT
Sbjct: 193 FMCQGGDFTKHNGTGGKSIYGAKFEDENFVLKHTGAGVLSMANSGPNTNGSQFFLTTEKT 252
Query: 450 SWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 313
WLDG+HVVFGNV+EG +VV+++E GSQSGK SK++VI DCG+++
Sbjct: 253 DWLDGKHVVFGNVIEGFDVVRKMEAVGSQSGKASKKVVIDDCGELS 298
>SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 169 bits (410), Expect = 2e-42
Identities = 76/105 (72%), Positives = 87/105 (82%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
FM QGGDFT +GTGGKSIYG KF DENF LKHTGPG+LSMANAG TNGSQFF+ T KT
Sbjct: 59 FMCQGGDFTRGDGTGGKSIYGAKFADENFNLKHTGPGILSMANAGPGTNGSQFFLCTAKT 118
Query: 450 SWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 316
SWLDG+HVVFG+V +GM+VVK+IE GS SGKTSK++VI D +
Sbjct: 119 SWLDGKHVVFGSVKDGMDVVKKIEKVGSDSGKTSKKVVIADSASV 163
>SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 138 bits (334), Expect = 3e-33
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
FM QGGDFTN +GTGG SIYG F+DENF LKH GPG L MANAG +TNGSQF+ITT+KT
Sbjct: 82 FMIQGGDFTNKDGTGGYSIYGKYFDDENFNLKHYGPGWLCMANAGKNTNGSQFYITTIKT 141
Query: 450 SWLDGRHVVFGNVVEGMEVVKQIE 379
SWLDG H FG V+EGM+VV++IE
Sbjct: 142 SWLDGSHTCFGKVLEGMDVVRRIE 165
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 137 bits (332), Expect = 6e-33
Identities = 63/79 (79%), Positives = 67/79 (84%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
FM QGGDFT +GTGGKSIYG KF DENF L+H G G LSMANAG DTNGSQFFITTVKT
Sbjct: 101 FMIQGGDFTKGDGTGGKSIYGQKFADENFKLQHYGAGWLSMANAGKDTNGSQFFITTVKT 160
Query: 450 SWLDGRHVVFGNVVEGMEV 394
WLDGRHVVFG V++GMEV
Sbjct: 161 PWLDGRHVVFGKVLKGMEV 179
>SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19)
Length = 99
Score = 97.9 bits (233), Expect = 6e-21
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Frame = -3
Query: 597 NGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 421
+GTGG+SI+G +FEDE + L+H P +SMANAG +TNGSQFFIT V T WLD +H VF
Sbjct: 2 DGTGGESIWGGEFEDEFHRNLRHDRPYTVSMANAGPNTNGSQFFITVVPTPWLDNKHTVF 61
Query: 420 GNVVEGMEVVKQI 382
G VV+GM+V +QI
Sbjct: 62 GRVVKGMDVAQQI 74
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 91.5 bits (217), Expect = 5e-19
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = -3
Query: 537 KHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 358
+H PG+LSMAN+G +TNGSQFFITTV T LDGRHVVFG V++GM+VV+++E
Sbjct: 188 EHDKPGLLSMANSGPNTNGSQFFITTVPTPHLDGRHVVFGKVLKGMDVVRELEATPVDDS 247
Query: 357 KTSKRIVIKDCGQIA 313
+I++CG++A
Sbjct: 248 SPKSPCIIEECGELA 262
>SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 89.0 bits (211), Expect = 3e-18
Identities = 40/65 (61%), Positives = 49/65 (75%)
Frame = -3
Query: 510 MANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIK 331
MANAG DTNGSQFFITTVKTSWLDG+HVVFG V+EGM+VV+++E + K +I
Sbjct: 1 MANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKLENVNVKGSTPVKTCMID 60
Query: 330 DCGQI 316
D G +
Sbjct: 61 DSGTL 65
>SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24)
Length = 145
Score = 88.6 bits (210), Expect = 4e-18
Identities = 39/91 (42%), Positives = 57/91 (62%)
Frame = -3
Query: 594 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 415
G GG+S+YG FEDE+F++ H GV+ MAN G TNGSQF+IT W+D ++V FG
Sbjct: 46 GIGGESVYGPLFEDEDFSVAHNRRGVVGMANKGRHTNGSQFYITLQPAPWMDTKYVAFGQ 105
Query: 414 VVEGMEVVKQIETFGSQSGKTSKRIVIKDCG 322
V+EG+ V+ +E + + + + DCG
Sbjct: 106 VIEGLNVLDVLEGQETFNERPKVECRVADCG 136
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 86.2 bits (204), Expect = 2e-17
Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Frame = -3
Query: 597 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 418
NGTGG+SIYG F DE F KH P +LSMAN G +TNGSQFFI HVVFG
Sbjct: 25 NGTGGESIYGGTFGDECFEFKHERPMLLSMANRGPNTNGSQFFII----------HVVFG 74
Query: 417 NVVEGMEVVKQIETF-GSQSGKTSKRIVIKDCGQI 316
+V++G E+V+QIE+ ++ + + + + +CG++
Sbjct: 75 HVIQGEELVRQIESLPTNEKNRPNADVKVSNCGEL 109
>SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05)
Length = 49
Score = 77.4 bits (182), Expect = 9e-15
Identities = 33/46 (71%), Positives = 41/46 (89%)
Frame = -3
Query: 519 VLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 382
+LSMANAG TNGSQFF+ T KTSWLDG+HVVFG+V +GM+VVK++
Sbjct: 2 ILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKM 47
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = -3
Query: 534 HTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 418
H G +SMAN G ++NGSQFFI K LD ++ +FG
Sbjct: 301 HNARGTVSMANNGPNSNGSQFFICYGKQPHLDMKYTMFG 339
>SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2)
Length = 175
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/40 (35%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = -3
Query: 432 HVVFGNVVEGMEVVKQIETF-GSQSGKTSKRIVIKDCGQI 316
HVVFG+V++G E+V+QIE+ ++ + + + + +CG++
Sbjct: 3 HVVFGHVIQGEELVRQIESLPTNEKNRPNADVKVSNCGEL 42
>SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Frame = -3
Query: 534 HTGPGVLSMANAGA-DTNGSQFFITTVKTSWLDGR-----HVVFGNVVEGMEVVKQI 382
H G L+MA D+ SQFFI ++LD + VFG VV+GM+VV +I
Sbjct: 101 HNVRGTLAMARTQVRDSATSQFFINHKDNAFLDHGSRDFGYAVFGKVVKGMDVVDKI 157
>SB_24760| Best HMM Match : PT (HMM E-Value=0.17)
Length = 422
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +2
Query: 392 TTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 529
TT PST P T PS+ E +T WEP P PGP
Sbjct: 34 TTGEPSTWEPMTGA-PSTWEPMTGAPSTWEPWTDGPGPYPTDGPGP 78
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 419 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 529
P TT PS+ E +T WEP+ AP+ T GP
Sbjct: 32 PFTTGEPSTWEPMTGAPSTWEPMTGAPSTWEPWTDGP 68
>SB_6387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 389 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 529
L+ + + FP TT P + + T + EPL+ P +R P P
Sbjct: 13 LSATQLTAAFPTTTTTPVTTQTTTTDVSRTEPLIELPTAQEKRKPCP 59
>SB_3760| Best HMM Match : SVA (HMM E-Value=0.19)
Length = 259
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Frame = +2
Query: 416 FPKTTCLPSSQE-----VLTVVMKNWEPLVSAPALAMERTPGP 529
FP+ + LP S E +LT++++N P ++APA + P P
Sbjct: 81 FPQPSLLPPSSESFDITLLTILLRNICPTLTAPATGWDALPAP 123
>SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1110
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = +2
Query: 416 FPKTTCLPSSQE-----VLTVVMKNWEPLVSAPALAMERTPGP 529
FP+ LP S E +LT++++N P ++APA + P P
Sbjct: 81 FPQPPLLPPSSESFDITLLTILLRNICPTLTAPATGWDALPAP 123
>SB_40118| Best HMM Match : DREPP (HMM E-Value=0.085)
Length = 512
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +1
Query: 322 TTVFDNDSLRGLPRLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEE 474
T V +N + PR A +GL D F+ K+ MS I+PGG D +EE
Sbjct: 431 TKVPENVQPKPKPRRAGEGLPHSDFKSGFSY--KEYMSGIRPGGPDMEEEE 479
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +2
Query: 371 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 550
P+ TTS PST+ P+T ++ T N AP+ + RT + LR
Sbjct: 87 PRTGSTTTTSAPSTSTPRTGSTTTTSAPSTSTTSN--STTRAPSTSTPRTGSTITLRTST 144
Query: 551 SS 556
+S
Sbjct: 145 TS 146
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +2
Query: 359 PDWLPKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 529
P P + TT+ P TT P+TT P + T + P + P +T P
Sbjct: 1767 PPHSPPTTTTTTTTTPETTAPRTT-TPETTTPETTTPRTTTPETTKPRTTTPKTTTP 1822
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 368 LPKVSICL-TTSMPSTTFPKTTCLPSSQEVLTV-VMKNWEPLVSAPALAMERTPGP 529
+P+ ++ L TT+ P TT P T + S + +V M + S +A E T P
Sbjct: 1626 VPETTLALETTTAPETTLPPETTMASESTLASVTTMAPESTVASVTTMAPESTLAP 1681
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = -3
Query: 615 GDFTNHNGTGGKSIYGNK-FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLD 439
G T GTGG S N + T PGV AN G S + ++ TSW +
Sbjct: 313 GAGTGGPGTGGPSGSSNPPTTGTPASASPTAPGVKGGANGGDCFRDSCYIFSSEGTSWTE 372
Query: 438 GR 433
R
Sbjct: 373 NR 374
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,664,468
Number of Sequences: 59808
Number of extensions: 377121
Number of successful extensions: 1085
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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