Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F03
(632 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 177 5e-45
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 177 5e-45
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 177 7e-45
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 170 8e-43
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 167 4e-42
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 167 5e-42
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 165 3e-41
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 161 4e-40
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 153 9e-38
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 151 5e-37
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 142 2e-34
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 142 2e-34
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 134 3e-32
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 127 7e-30
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 122 2e-28
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 109 2e-24
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 105 2e-23
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 96 2e-20
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 88 4e-18
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 83 1e-16
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 75 5e-14
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 69 3e-12
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 61 5e-10
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 33 0.12
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 33 0.21
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 33 0.21
At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid t... 31 0.48
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 29 2.6
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 29 2.6
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 29 2.6
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 29 3.4
At5g59930.1 68418.m07515 DC1 domain-containing protein / UV-B li... 28 4.5
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 28 4.5
At3g08840.2 68416.m01026 D-alanine--D-alanine ligase family simi... 28 5.9
At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C... 27 7.8
At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C... 27 7.8
At2g46450.1 68415.m05780 cyclic nucleotide-regulated ion channel... 27 7.8
At2g46440.1 68415.m05779 cyclic nucleotide-regulated ion channel... 27 7.8
At2g16030.1 68415.m01838 expressed protein 27 7.8
At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar ... 27 7.8
At1g03590.1 68414.m00339 protein phosphatase 2C family protein /... 27 7.8
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 177 bits (431), Expect = 5e-45
Identities = 79/106 (74%), Positives = 91/106 (85%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
FM QGGDFT NGTGG+SIYG+KFEDENF KHTGPG+LSMANAGA+TNGSQFFI TVKT
Sbjct: 67 FMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKT 126
Query: 450 SWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 313
WLDG+HVVFG VVEG++VVK IE GS SGK +K +V+ DCGQ++
Sbjct: 127 DWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 177 bits (431), Expect = 5e-45
Identities = 80/106 (75%), Positives = 90/106 (84%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
FM QGGDFT NGTGG+SIYG KFEDENF KHTGPG+LSMANAGA+TNGSQFFI TVKT
Sbjct: 68 FMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKT 127
Query: 450 SWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 313
WLDG+HVVFG VVEG++VVK IE GS SGK +K +VI DCG+I+
Sbjct: 128 DWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 177 bits (430), Expect = 7e-45
Identities = 80/106 (75%), Positives = 91/106 (85%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
FM QGGDFT NGTGG+SIYG+KF+DENF KHTGPG+LSMANAGA+TNGSQFFI T KT
Sbjct: 68 FMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKT 127
Query: 450 SWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 313
SWLDG+HVVFG VVEG+ VV+ IE GS SG+TSK +VI DCGQI+
Sbjct: 128 SWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 170 bits (413), Expect = 8e-43
Identities = 75/105 (71%), Positives = 88/105 (83%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
FM QGGDFT NGTGG+SIYG+KFEDENF LKHTGPG+LSMAN+G +TNGSQFFI T KT
Sbjct: 67 FMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKT 126
Query: 450 SWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 316
SWLDG+HVVFG VV+G VVK +E GS G S+R+VI+DCG++
Sbjct: 127 SWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 167 bits (407), Expect = 4e-42
Identities = 76/106 (71%), Positives = 88/106 (83%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
FM QGGDFT NGTGG+SIYG KF+DENF KHTG G+LSMAN+G +TNGSQFFI T KT
Sbjct: 67 FMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKT 126
Query: 450 SWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 313
SWLDG+HVVFG VV+G++VVK IE GS SGKTSK + I DCGQ++
Sbjct: 127 SWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 167 bits (406), Expect = 5e-42
Identities = 76/105 (72%), Positives = 86/105 (81%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
FM QGGDFT+ NG GG+SIYG KF DENF LKHTGPGVLSMAN+G DTNGSQFFITTV T
Sbjct: 95 FMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTT 154
Query: 450 SWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 316
SWLDGRHVVFG VV+GM+VV +IE G QSG ++VI D G++
Sbjct: 155 SWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 199
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 165 bits (400), Expect = 3e-41
Identities = 75/105 (71%), Positives = 85/105 (80%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
FM QGGDFT+ NG GG+SIYG KF DENF LKHTGPG LSMANAG DTNGSQFFITTV T
Sbjct: 98 FMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTT 157
Query: 450 SWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 316
SWLDGRHVVFG VV GM+VV ++E G+QSG ++VI D G++
Sbjct: 158 SWLDGRHVVFGKVVTGMDVVYKVEAEGNQSGTPKSKVVIVDSGEL 202
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 161 bits (391), Expect = 4e-40
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
FM QGGDF NGTGGKS+YG F+DENF L H GPGVLSMANAG +TNGSQFFI T+KT
Sbjct: 149 FMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKT 208
Query: 450 SWLDGRHVVFGNVVEGMEVVKQIETFGSQSG-KTSKRIVIKDCGQI 316
SWLDGRHVVFG V+EGMEVVK IE + G + K++VI DCGQ+
Sbjct: 209 SWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQL 254
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 153 bits (371), Expect = 9e-38
Identities = 69/106 (65%), Positives = 82/106 (77%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
FM QGGDFT +G GG+SIYG+KF DENF LKHTGPG LSMAN+G D+NGSQFFITTV T
Sbjct: 122 FMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGPDSNGSQFFITTVTT 181
Query: 450 SWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 313
SWLDG HVVFG V+ GMEVV++IE G SG ++I G+++
Sbjct: 182 SWLDGHHVVFGKVLSGMEVVRKIEAQGQDSGVPKANVIIFASGEVS 227
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 151 bits (365), Expect = 5e-37
Identities = 70/106 (66%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
FM QGGDFT NGTGG SIYG KFEDENFTLKHTGPG+LSMANAG +TNGSQFFI TVKT
Sbjct: 151 FMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKT 210
Query: 450 SWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKR-IVIKDCGQI 316
SWLD +HVVFG V+EGM++V+ +E+ +++ K+ I CG++
Sbjct: 211 SWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKKGCRIYACGEL 256
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 142 bits (344), Expect = 2e-34
Identities = 65/104 (62%), Positives = 77/104 (74%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
FM QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G +TNGSQFFI +
Sbjct: 71 FMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQ 130
Query: 450 SWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQ 319
LDG+HVVFG VVEGM V+K++E G+ GK + + I DCG+
Sbjct: 131 PHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKPTSPVKIIDCGE 174
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 142 bits (344), Expect = 2e-34
Identities = 65/104 (62%), Positives = 77/104 (74%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
FM QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G +TNGSQFFI +
Sbjct: 71 FMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQ 130
Query: 450 SWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQ 319
LDG+HVVFG VVEGM V+K++E G+ GK + + I DCG+
Sbjct: 131 PHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKPTSPVKIIDCGE 174
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 134 bits (325), Expect = 3e-32
Identities = 64/106 (60%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
FM QGGD + ++GTGG+SIYG KF+DENF LKH G+LSMAN+G +TNGSQFFITT +T
Sbjct: 68 FMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRT 127
Query: 450 SWLDGRHVVFGNVVEGMEVVKQIETFG-SQSGKTSKRIVIKDCGQI 316
S LDG+HVVFG V +GM VV+ IE + S+ +VI DCG+I
Sbjct: 128 SHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIHDCGEI 173
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 127 bits (306), Expect = 7e-30
Identities = 58/107 (54%), Positives = 78/107 (72%), Gaps = 2/107 (1%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
FM Q GDF ++G+G SIYG+KFEDENFT KHTGPG+LSMAN+G +TNG QFFIT K
Sbjct: 93 FMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKC 152
Query: 450 SWLDGRHVVFGNVV-EGMEVVKQIETFG-SQSGKTSKRIVIKDCGQI 316
WLD +HVVFG V+ +G+ V+++IE + + +VI +CG++
Sbjct: 153 DWLDNKHVVFGRVLGDGLLVMRKIENVAIGPNNRPKLAVVITECGEM 199
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 122 bits (295), Expect = 2e-28
Identities = 57/106 (53%), Positives = 75/106 (70%), Gaps = 1/106 (0%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 451
F+ QGGD + +G SIYG F DENF ++H+ G+++MAN G D+NGSQFFITTVK
Sbjct: 110 FVIQGGDIIHGDGKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTVKA 169
Query: 450 SWLDGRHVVFGNVVEGMEVVKQIE-TFGSQSGKTSKRIVIKDCGQI 316
SWL+G HVV G V++GM+ V IE G+ SGK K++VI D G+I
Sbjct: 170 SWLEGEHVVLGKVIQGMDNVFAIEGGAGTYSGKPRKKVVIADSGEI 215
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 109 bits (261), Expect = 2e-24
Identities = 53/84 (63%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 454
F+ QGGD T G GG+SIYG+KFEDE N LKHTG G+LSMANAG +TNGSQFFIT
Sbjct: 58 FIVQGGDPTG-TGRGGESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAP 116
Query: 453 TSWLDGRHVVFGNVVEGMEVVKQI 382
LDG+H +FG V GMEV+K++
Sbjct: 117 QPSLDGKHTIFGRVCRGMEVIKRL 140
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 105 bits (253), Expect = 2e-23
Identities = 53/85 (62%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 454
FM Q GD +GTGG+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV
Sbjct: 524 FMIQTGDPLG-DGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVA 582
Query: 453 TSWLDGRHVVFGNVVEGMEVVKQIE 379
T WLD +H VFG VV+GM+VV+ IE
Sbjct: 583 TPWLDNKHTVFGRVVKGMDVVQGIE 607
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 95.9 bits (228), Expect = 2e-20
Identities = 46/101 (45%), Positives = 62/101 (61%)
Frame = -3
Query: 621 QGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWL 442
Q GDF N NGT G+SIY KF DE+ L+H G+LSM+ A D GS F IT L
Sbjct: 74 QAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHFHITFRPNQQL 133
Query: 441 DGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQ 319
D +VVFG +++G E++K+IE G + GK + + I CG+
Sbjct: 134 DRNNVVFGKLIQGKEILKKIERVGDEEGKPTVSVKIIRCGE 174
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 88.2 bits (209), Expect = 4e-18
Identities = 45/85 (52%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 454
FM QGGD G GG SI+G KF DE +LKH G+LSMAN+G +TNGSQFFIT K
Sbjct: 49 FMIQGGD-PKGTGKGGTSIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAK 107
Query: 453 TSWLDGRHVVFGNVVEGMEVVKQIE 379
L+G + +FG V+ G EV+ +E
Sbjct: 108 QPHLNGLYTIFGKVIHGFEVLDIME 132
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 83.4 bits (197), Expect = 1e-16
Identities = 43/85 (50%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 454
FM QGGD T G GG+SI+G F+DE N L H+G GV+SMAN+G TNGSQFF+
Sbjct: 392 FMIQGGDPTG-TGKGGESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKS 450
Query: 453 TSWLDGRHVVFGNVVEGMEVVKQIE 379
+ L+ +H VFG VV G+ + +E
Sbjct: 451 ATHLNYKHTVFGGVVGGLATLAAME 475
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 74.5 bits (175), Expect = 5e-14
Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGA-DTNGSQFFITTV 457
F+ QGGD T +GTGG SIYG F DE + L+ + G+++MANA + ++NGSQFF T
Sbjct: 61 FLVQGGDPTG-SGTGGDSIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLD 119
Query: 456 KTSWLDGRHVVFGNV 412
K WLD +H +FG V
Sbjct: 120 KCDWLDKKHTIFGKV 134
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 68.5 bits (160), Expect = 3e-12
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 4/113 (3%)
Frame = -3
Query: 627 MXQGGDFTNHNGTGGKSIYGNKFEDENFTLKHT-GPGVLSMANAGADTNGSQFFITTVKT 451
M GGD N + I+ + +DE F L H GPG++SMA D+NGSQF I
Sbjct: 68 MWCGGDIIFEN----EPIHSEELDDEYFILNHEDGPGIISMA----DSNGSQFQIHMKDY 119
Query: 450 SW-LDGRHVVFGNVVEGMEVVKQI--ETFGSQSGKTSKRIVIKDCGQIA*FKS 301
+DG HVV G VVEG+++++ I E + + SK +VI DCG+++ ++S
Sbjct: 120 GLQVDGDHVVIGKVVEGLDLMRNIEKEVITTTTRTPSKPVVIADCGELSDYRS 172
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 61.3 bits (142), Expect = 5e-10
Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Frame = -3
Query: 630 FMXQGGDFTNHNGTGGKSIY----GNK---FEDE-NFTLKHTGPGVLSMANAGADTNGSQ 475
F Q GD T G GG SIY G + ++DE + LKH+ G ++MA+ G + N SQ
Sbjct: 49 FTAQTGDPTG-TGAGGDSIYKFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQ 107
Query: 474 FFIT-TVKTSWLDGRHVVFGNVVEGMEVVKQI-ETFGSQSGKTSKRIVIK 331
F+ T +LDG+H VFG + EG + + +I E + + K I IK
Sbjct: 108 FYFTLRDDLDYLDGKHTVFGQIAEGFDTLTRINEAYVDPKNRPYKNIRIK 157
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = -3
Query: 486 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTS 349
NG++F IT V + L+ +V G V+EGM VV+++ + TS
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKMREVKTVRDNTS 275
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 32.7 bits (71), Expect = 0.21
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -3
Query: 492 DTNGSQFFITTVK--TSWLDGRHVVFGNVVEGMEVVKQIET 376
D +F ITT + LDG ++VFG V+EG++VV I +
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 231
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = -3
Query: 543 TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 379
+LKH ++ A + G +FFI + + L+ + VFG V +G +VV++IE
Sbjct: 152 SLKHE-EFMVGTPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIE 205
>At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related weak hit to Pfam PF00234:
Protease inhibitor/seed storage/LTP family
Length = 219
Score = 31.5 bits (68), Expect = 0.48
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +2
Query: 380 SICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSS 559
++ T PS++ P TC ++E+ V+ P VS+P M TP P+C V F+SS
Sbjct: 22 AVTATQQAPSSSPPVLTC---TEEL--VMFSPCLPYVSSPPNNMSETPDPICCSV-FTSS 75
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -3
Query: 477 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 379
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -3
Query: 477 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 379
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -3
Query: 477 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 379
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 511 GENARSSVLKGEILVLELIAVDGLSPSAVMVGEV 612
G+N ++S +GEI+ +I + GL A+++G +
Sbjct: 361 GQNLKTSAFEGEIIFAIVICISGLVLFALLIGNM 394
>At5g59930.1 68418.m07515 DC1 domain-containing protein / UV-B
light-insensitive protein, putative similar to ULI3
(UV-B light insensitive) [Arabidopsis thaliana]
GI:17225050; contains Pfam profile PF03107: DC1 domain
Length = 656
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 176 LLLM*RTGYCIYFHALLVCSLLHFCYYI 93
++L R G +YF C L+HF YY+
Sbjct: 629 VILKFREGNIVYFFCSRSCFLMHFSYYL 656
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 28.3 bits (60), Expect = 4.5
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = -3
Query: 612 DFTNHNG-TGGKSIYGNKFEDENFTLKHTGPGVLSM---ANAGADTNGSQFFITTVKTSW 445
+F N N T S + + E+E KH+ L + A +G DTNG FF KT+
Sbjct: 517 NFANSNYLTERTSRWIEECEEEEAQEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTA 576
Query: 444 LDGRHVVFGNVVEGMEVVKQIETFGSQ 364
+VF N + EVV++++ Q
Sbjct: 577 KKDIELVFVNPLS--EVVEKLQRADEQ 601
>At3g08840.2 68416.m01026 D-alanine--D-alanine ligase family similar
to D-alanine--D-alanine ligase (EC 6.3.2.4)
(D-alanylalanine synthetase) (D-Ala-D-Ala ligase)
(Swiss-Prot:O51218) [Borrelia burgdorferi]; similar to
D-alanine--D-alanine ligase (EC 6.3.2.4)
(D-alanylalanine synthetase) (D-Ala-D-Ala ligase).
(Swiss-Prot:P95803) [Streptococcus mutans]
Length = 937
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 541 GEILVLELIAVDGLSPSAVMV 603
GE+LV+E+ V G++PS V++
Sbjct: 889 GEVLVIEVNTVPGMTPSTVLI 909
>At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 7.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 464 VMKNWEPLVSAPALAMERTPGPVCLR 541
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 7.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 464 VMKNWEPLVSAPALAMERTPGPVCLR 541
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At2g46450.1 68415.m05780 cyclic nucleotide-regulated ion channel,
putative (CNGC12) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc3) GI:4581201 from
[Arabidopsis thaliana]
Length = 636
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 511 GENARSSVLKGEILVLELIAVDGLSPSAVMVGEV 612
G+N +S GEI +I V GL AV++G V
Sbjct: 306 GQNLETSNSAGEIFFAIIICVSGLLLFAVLIGNV 339
>At2g46440.1 68415.m05779 cyclic nucleotide-regulated ion channel,
putative (CNGC11) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc3) GI:4581201 from
[Arabidopsis thaliana]
Length = 588
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 511 GENARSSVLKGEILVLELIAVDGLSPSAVMVGEV 612
G+N +S GEI +I V GL AV++G V
Sbjct: 286 GQNLETSNSAGEIFFAIIICVSGLLLFAVLIGNV 319
>At2g16030.1 68415.m01838 expressed protein
Length = 231
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 329 SLITILLEVFPDWLPKVSICLTT-SMPSTTFPKTTCLPSSQEVLTVVMKN 475
S+ T+L+ + PK I S P T FP++TC S ++ L + KN
Sbjct: 18 SIGTVLMVIMILQTPKTCISPEAPSKPHTHFPRSTCDSSPRQHLPLPKKN 67
>At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar to
beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
GI:8918271 from [Pisum sativum]
Length = 769
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2
Query: 419 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDFP 586
PK +PS E +V +W + A ER P P+ K ++ L DFP
Sbjct: 666 PKKRYIPSEGERSNLVQTSWAMMGLLHAGQAERDPSPLHRAAKLLINSQLENGDFP 721
>At1g03590.1 68414.m00339 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2C;
PP2C (GI:3643088) [Mesembryanthemum crystallinum];
contains Pfam PF00481 : Protein phosphatase 2C domain;
Length = 447
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 464 VMKNWEPLVSAPALAMERTPGPVCLR 541
V + W P +AP LAM R G CL+
Sbjct: 240 VSRVWLPFDNAPGLAMARAFGDFCLK 265
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,268,513
Number of Sequences: 28952
Number of extensions: 272524
Number of successful extensions: 634
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1295224128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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