Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_F01
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical ...    30   1.6  
Z68117-4|CAA92180.1|  589|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AC024807-1|AAF59529.5|  704|Caenorhabditis elegans Hypothetical ...    28   6.6  

>AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical
           protein M70.1 protein.
          Length = 931

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -2

Query: 617 KKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 489
           KK D  P+       VP   TP+ A  P     P  ++KP D+
Sbjct: 812 KKKDTKPSAPKPKPDVPVNPTPQTAKVPVAPAPPAKDEKPKDV 854


>Z68117-4|CAA92180.1|  589|Caenorhabditis elegans Hypothetical
           protein F45E6.2 protein.
          Length = 589

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
 Frame = -3

Query: 349 PQKVRNHLTNPNLKKTNLR*TAEALSGGRVLTVFDTRPLLAANTLTRAPL---PTREIN- 182
           P  V N+L   N        T+     GRV+T  D+ P+  A   T+ P+   P    N 
Sbjct: 342 PFNVDNNLNINNQIMAISNETSMVARHGRVITYEDSAPV--AKIPTQQPIHNYPNSTQND 399

Query: 181 CSIYV*NYPM*VRVAFSTPRWITVYFLD 98
           C +Y  N    +RV     RW+ V+  D
Sbjct: 400 CDMYKLNATETIRVNNDIERWVQVHSFD 427


>AC024807-1|AAF59529.5|  704|Caenorhabditis elegans Hypothetical
           protein Y53G8AL.1 protein.
          Length = 704

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 620 VKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 489
           V  +DL  T E+    +PEI TP   D+ +  +N V+  + ++I
Sbjct: 289 VPSLDLEETTENPE--IPEISTPREEDSAENLENLVENSEKSEI 330


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,383,346
Number of Sequences: 27780
Number of extensions: 166046
Number of successful extensions: 454
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)