Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_E22
(833 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3B8.09 |||U3 snoRNP-associated protein Utp3 |Schizosaccharom... 61 2e-10
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 40 6e-04
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 36 0.005
SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces... 34 0.029
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 32 0.087
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 31 0.15
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 31 0.27
SPCC338.08 |ctp1|mug38|sequence orphan|Schizosaccharomyces pombe... 30 0.35
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 30 0.47
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.61
SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomy... 29 0.61
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 29 0.81
SPAC977.15 |||dienelactone hydrolase family|Schizosaccharomyces ... 29 1.1
SPAC29E6.09 ||SPAC30.13|sequence orphan|Schizosaccharomyces pomb... 29 1.1
SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subun... 29 1.1
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 29 1.1
SPBC651.09c |||RNA polymerase II associated Paf1 complex |Schizo... 28 1.4
SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharom... 25 1.4
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 28 1.9
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 28 1.9
SPCC962.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 28 1.9
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 27 2.5
SPCC126.14 |prp18||U5 snRNP-associated protein Prp18|Schizosacch... 27 2.5
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 27 2.5
SPAC6B12.11 |drc1|sld1|DNA replication protein Drc1|Schizosaccha... 27 3.3
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |... 27 3.3
SPBC336.04 |cdc6|pol3, pold, mis10|DNA polymerase delta catalyti... 27 3.3
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 27 3.3
SPAC1F7.06 |||ThiJ domain protein|Schizosaccharomyces pombe|chr ... 27 4.3
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 4.3
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 27 4.3
SPBC336.07 |sfc3||transcription factor TFIIIC complex subunit Sf... 27 4.3
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 27 4.3
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 27 4.3
SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|c... 26 5.7
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 26 5.7
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 26 5.7
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 5.7
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 26 5.7
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 26 5.7
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 26 5.7
SPCPB1C11.01 |amt1||ammonium transporter Amt1|Schizosaccharomyce... 26 5.7
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 26 7.6
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 26 7.6
SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces pombe... 26 7.6
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 26 7.6
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 26 7.6
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 7.6
>SPBC3B8.09 |||U3 snoRNP-associated protein Utp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 597
Score = 61.3 bits (142), Expect = 2e-10
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = -1
Query: 269 GMKREITYQIAKNKGLTPHRKKDQRNPRVKHKLKYRKA--KIRRKGAVREPKTEVXRXGG 96
G KR IT IAKN+GLTP R K+ RNPR+K +++Y KA K+ K A+ + + G
Sbjct: 523 GDKRGITLDIAKNRGLTPRRPKENRNPRLKKRMRYEKAKKKLASKKAIYKGAPQ-GGYAG 581
Query: 95 EAXGXKANLKKSXTRQ 48
E G KA L KS Q
Sbjct: 582 EQTGIKAGLVKSIKLQ 597
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 39.5 bits (88), Expect = 6e-04
Identities = 21/99 (21%), Positives = 52/99 (52%)
Frame = -1
Query: 569 EQKEAKKRKLEKLISESTPKKLKLISATEKDEGEDTGVSDDEEYEGNYYFKDNDKVENVP 390
++K+ ++R+L++ + + L+ + +K +D +SDDEE + K + K
Sbjct: 894 KEKQERERQLQEERQKMQEEVLEWRKSQQKASEDDMSLSDDEEKQSGKKKKKDRKKRKSK 953
Query: 389 RSNESEESGFSDNEDTVLGETEVDHNKPSTSSQQIVTED 273
ES +SG S++++ L + + K ++++++E+
Sbjct: 954 SKQESSDSGVSEDDEIPLSDAR-NKTKKRRVNRRVISEE 991
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 36.3 bits (80), Expect = 0.005
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -1
Query: 527 SESTPKKLKLISATEKDEGEDTGVSDDEEYEGNYYFKDNDKVENV--PRSNESEESGFSD 354
SES S++ + ED SD + E +D+D + S+ S E G S+
Sbjct: 261 SESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSN 320
Query: 353 NEDTVLGETEVDHNKPSTSSQQ 288
+ T GE + STSS++
Sbjct: 321 TDTTTSGEVSAQSSTNSTSSEE 342
Score = 29.1 bits (62), Expect = 0.81
Identities = 19/74 (25%), Positives = 30/74 (40%)
Frame = -1
Query: 494 SATEKDEGEDTGVSDDEEYEGNYYFKDNDKVENVPRSNESEESGFSDNEDTVLGETEVDH 315
S + ++ + + S D E E + KD+D N S + S SD+E E
Sbjct: 245 SESSSEDSDSSSSSSDSESESSS--KDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDST 302
Query: 314 NKPSTSSQQIVTED 273
+ S S +ED
Sbjct: 303 SSSSDSDSSSSSED 316
>SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 33.9 bits (74), Expect = 0.029
Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Frame = -1
Query: 413 NDKVENVPRSNESEESGF-SDNEDTVLGE---TEVDHNKPSTSSQQIVTED---LGMKRE 255
N +EN S++ E+S SD+E+ E TE D + + + + +D + +E
Sbjct: 90 NSSLENDEESSQQEDSSSKSDSEEESSMEPKTTEYDEDDKHVTVEIVEDDDDEEIAYPKE 149
Query: 254 --ITYQIAK--NKGLTPHRKKDQRNPRVKHKLKYRKAKIRRKGAVREPKTEVXR 105
+T +I+ + L PH+ K+ + +++ K+ + + RRK +R K ++ R
Sbjct: 150 GFVTPRISPPPDVPLRPHKPKNAAKKKFRYESKFERTQDRRKEKIRRLKKKIRR 203
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 32.3 bits (70), Expect = 0.087
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Frame = -1
Query: 572 NEQKEAKKRKLEKLISESTPKKLKLISATEKDEGE---DTGVSDDEEYEGNYYFKDNDKV 402
+E+ E + K +K ++ S + S+ E++E E D+ VSD+ E E + ++
Sbjct: 62 SEESEVEVPK-KKAVAASEDSESDSESSEEEEETESEEDSEVSDESESESESESESEEES 120
Query: 401 ENVPRSNESEESGFSDNEDTVLGETEVDHNKPS 303
E+ S+ESE SG S + L + E + KP+
Sbjct: 121 ESEEESDESERSGPS----SFLKKPEKEEAKPA 149
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 31.5 bits (68), Expect = 0.15
Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = -1
Query: 569 EQKEAKKR--KLEKLISEST-PKKLKLISATEKDEGEDTGVSDDEEYEGNYYFKDNDKVE 399
E E KK+ + K + + PKK+ S +K +G S+ + N KD+ E
Sbjct: 8 ESTEVKKKDGSMNKRVKVAKLPKKVDSFSPKKKKNTTSSGSSESDSMSQNDKKKDSSLNE 67
Query: 398 NVPRSNESEESGFSDNEDTVLGETEVDHNKPSTSSQQIVTEDLGMKREI 252
+ S+N++ E+E ++++ S+S + E ++++
Sbjct: 68 SEDEDFAGFGESASENDELESAESEAENDEESSSQKSNSKESHAQRKKL 116
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 30.7 bits (66), Expect = 0.27
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Frame = -1
Query: 758 TNISFYLLXKSQRVNIQNHPV---IKRLYQYRQMLNKMEPIYLEVIKPQIDKILL----- 603
T ++ YLL K++R+ +++ P IK +R+ + + + ++ I+K L+
Sbjct: 113 TRLTQYLL-KARRLALKHQPALIPIKPKQAHREASRERKALIAAKLEKNIEKELVKRLKS 171
Query: 602 AVKNNLVLEVNEQKEAKKRKL-EKLISESTPKKLKLISATEKDEGEDTGVSDDEEYEGNY 426
V + L VNE+ K E LI E ++ E++E E VSDDE+ E
Sbjct: 172 GVYGDQPLNVNEEIWNKVLAAREGLIDEGEEEE-------EREEAELEFVSDDEDEEEIS 224
Query: 425 YFKDNDKVENVPRSNESEESGFSDNEDTVLGETEVDHNK 309
+D + ++ESEE S++E E E + NK
Sbjct: 225 DLEDWLGSDQSMETSESEEEESSESES---DEDEDEDNK 260
>SPCC338.08 |ctp1|mug38|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 30.3 bits (65), Expect = 0.35
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Frame = -1
Query: 677 YRQMLNKMEPIYLEVIKPQIDKILLAVKNNLVLEVNEQKEAKKRKLEKLISESTPKKL-- 504
YRQ+ N +E +E+ + K L ++ L ++V ++ E+ K K IS S K+
Sbjct: 16 YRQLGNLLEQYEVEIARL---KSQLVLEKKLRIQVEKELESVKTKQ---ISSSASSKVSS 69
Query: 503 ----KLISATEKDEGEDTGVSDDEEYEGNYYFKDNDKVENVP 390
+L S T++DE + D+E+ N F + ++ +P
Sbjct: 70 NTIQELDSTTDEDEIPGSDTVDEEDPSLNAPFSEKNQSVKIP 111
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.9 bits (64), Expect = 0.47
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Frame = -1
Query: 575 VNEQKEAKKRKLEKLISESTPKKLKLISATEKDEG------EDTGVSDDEEYEGNYYFKD 414
V +QK++KK++ SES + S++ + E + S E E K
Sbjct: 71 VKKQKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKT 130
Query: 413 NDKVENVPRSNESEESGFSDNEDTVLGETEVDHNKPSTSSQQIVTE 276
+K E+ S+ S ES + E+ V+ E + +SS+ +E
Sbjct: 131 EEKKESSSESSSSSES--EEEEEAVVKIEEKKESSSDSSSESSSSE 174
Score = 27.9 bits (59), Expect = 1.9
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = -1
Query: 584 VLEVNEQKEAKK-RKLEKLISESTPKKLKLISATEKDEGEDTGVSDDEEYEGNYYFKDND 408
V+++ E+KE+ E SES + S++E +E E+ +E+ EG+
Sbjct: 153 VVKIEEKKESSSDSSSESSSSESESES----SSSESEEEEEVVEKTEEKKEGS----SES 204
Query: 407 KVENVPRSNESEESGFSDNEDTVLGETEVDHNK 309
++ S+ S ESG SD+ E+ + K
Sbjct: 205 SSDSESSSDSSSESGDSDSSSDSESESSSEDEK 237
Score = 26.6 bits (56), Expect = 4.3
Identities = 20/95 (21%), Positives = 37/95 (38%)
Frame = -1
Query: 572 NEQKEAKKRKLEKLISESTPKKLKLISATEKDEGEDTGVSDDEEYEGNYYFKDNDKVENV 393
+E++E K+E+ S+ S + E E S + E E K +K E
Sbjct: 146 SEEEEEAVVKIEEKKESSSDSS----SESSSSESESESSSSESEEEEEVVEKTEEKKEGS 201
Query: 392 PRSNESEESGFSDNEDTVLGETEVDHNKPSTSSQQ 288
S+ ES + ++ ++ D S+S +
Sbjct: 202 SESSSDSESSSDSSSESGDSDSSSDSESESSSEDE 236
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 29.5 bits (63), Expect = 0.61
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = -1
Query: 578 EVNEQKEAKKRKLEKLISESTPKKLKLISATEKDEGEDTGVSDD----EEYEGNYYFKDN 411
++NEQK+ K ++L++ I++ T L + + EG+ T VS EE++ ++N
Sbjct: 158 DLNEQKDKKIKELKERINDLTYDYETLKANADDSEGKQTLVSKREAALEEFQSKLLIREN 217
Query: 410 DKVENVPRSNESEE 369
+ + + N E+
Sbjct: 218 EINKRELKMNGKED 231
>SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 29.5 bits (63), Expect = 0.61
Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 4/117 (3%)
Frame = -1
Query: 566 QKEAKKRKLEKLISESTPKKLKLISATEKDEGEDTGVSDDEEYEGNYYFKDNDKVENVPR 387
+K K++ +EK S P K + + DDEE E KD ++
Sbjct: 156 RKSHKRKSVEK---SSVPNKKHKAERKRSPSPKIEILEDDEEIEDVASDKDEEEKPWSGD 212
Query: 386 SNESEESGFSDNEDTVLGETEVDHNKPSTSSQQI----VTEDLGMKREITYQIAKNK 228
+ +E D+ED G + + +P S++ + T + +R++ Y + N+
Sbjct: 213 EEDDDELVVKDSEDETEGVSTIASQRPRRSARYVKLYGSTTNTSKRRKVDYAESGNE 269
>SPBC12C2.02c |ste20|ste16|sterility protein
Ste20|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1309
Score = 29.1 bits (62), Expect = 0.81
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -1
Query: 632 IKPQIDKILLAVKNNLVLEVNEQKEAKKRKLEKLISESTPKKLKLISATEKDEGED 465
I+ + +L N E E+KE K+K + S K +L+S+ E +GE+
Sbjct: 53 IRDGAETLLQVFDTNFKKETKERKEMLKKKCTDELESSKKKIEELVSSIESFQGEN 108
>SPAC977.15 |||dienelactone hydrolase family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 569 EQKEAKKRKLEKLISE-STPKKLKLISATEKDEGEDTGV 456
EQKEA+ + +EK+ S PK K+I E+ G+D +
Sbjct: 93 EQKEARSKFMEKISSPLHWPKLTKVIEDIERIHGQDVKI 131
>SPAC29E6.09 ||SPAC30.13|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 339
Score = 28.7 bits (61), Expect = 1.1
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = -1
Query: 500 LISATEKDEGEDTGVSDDEE----YEGNYYFKDNDKVENVPRSNESEESGFSDNEDTVLG 333
+ TE +E SD + YE +Y FKD + +P + + DN +T+L
Sbjct: 9 IFKGTEFEEQLSNLTSDSQANKRVYE-DYDFKDETSAKPIPTEKKLKVFKKDDNVETLLS 67
Query: 332 ETEVDHNKPSTSSQQIVTEDLGMKRE 255
E+ + K S QQ+ + +K++
Sbjct: 68 ALEIQNEK---SKQQVEYSFIPLKQD 90
>SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subunit
Rpa34 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 251
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 569 EQKEAKKRKLEKLISESTPKKLKLISATEKDE 474
+QKE KK K EK E PKK K +++K++
Sbjct: 219 KQKELKKGKREKKDEEEKPKKKKQKKSSKKEK 250
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 28.7 bits (61), Expect = 1.1
Identities = 20/88 (22%), Positives = 35/88 (39%)
Frame = -1
Query: 575 VNEQKEAKKRKLEKLISESTPKKLKLISATEKDEGEDTGVSDDEEYEGNYYFKDNDKVEN 396
+N+ EA K + S + + T ++GED ++ + N +D D VE
Sbjct: 43 LNDDSEAAKITTNEKQSSPVDSHNESPNDTTINKGEDGNENEVDNVNNNDKKEDEDNVEE 102
Query: 395 VPRSNESEESGFSDNEDTVLGETEVDHN 312
++ E D ED E + D +
Sbjct: 103 NEEEADANEEEEEDEEDDEEDEEDEDES 130
>SPBC651.09c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 28.3 bits (60), Expect = 1.4
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = -1
Query: 560 EAKKRKLE---KLISESTPKKLKLISATEKDEGEDTGVSDDEEYEGNYYFKDNDKVENVP 390
E KKR+ E + +SE T K+ + E++E E + ++E Y +Y +KVE V
Sbjct: 155 ELKKRRQERSARSVSERTRKRSPVSDYEEQNESEKS--EEEEGYSPSY---AEEKVEQVS 209
Query: 389 RSNES 375
+ N S
Sbjct: 210 KDNAS 214
>SPBC16C6.06 |pep1|vps10|sorting receptor for
CPY|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1466
Score = 24.6 bits (51), Expect(2) = 1.4
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -1
Query: 281 TEDLGMKREITYQIAKNKGLTPHRKKDQRNPR 186
+EDL ++I Y++ TP+++ R P+
Sbjct: 655 SEDLDTFQKIPYRLVPGNKCTPNKRDSHREPQ 686
Score = 21.8 bits (44), Expect(2) = 1.4
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 494 SATEKDEGEDTGVSDDEEYEGNYYFKDNDKVE 399
S T+ D DE+YE N F ND+ E
Sbjct: 610 SITDLHGSFDACECTDEDYECNTQFISNDQGE 641
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 476 EGEDTGVSDDEEYEGNYYFKDNDKVENVPRSNESEESGFSDNEDTVLGETEVDH 315
EG D G S + E + +D+D+ N +NE +S SD G + D+
Sbjct: 342 EGVDEGTSTEANDESS---EDDDEDNNTDEANEDAQSNVSDESPKGEGSSHSDN 392
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 27.9 bits (59), Expect = 1.9
Identities = 21/80 (26%), Positives = 32/80 (40%)
Frame = -1
Query: 407 KVENVPRSNESEESGFSDNEDTVLGETEVDHNKPSTSSQQIVTEDLGMKREITYQIAKNK 228
++ ++P+ ++ S+ E VL E E + S VTEDLG I I N
Sbjct: 98 QLASLPKLEVTDHDNVSEAETVVLNEDE--EKETSLVGSVSVTEDLGDSSAIGRTILVNN 155
Query: 227 GLTPHRKKDQRNPRVKHKLK 168
+ P + V LK
Sbjct: 156 SVEPQMENTANITIVSPSLK 175
>SPCC962.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 536
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/74 (21%), Positives = 33/74 (44%)
Frame = -1
Query: 779 DLILNYCTNISFYLLXKSQRVNIQNHPVIKRLYQYRQMLNKMEPIYLEVIKPQIDKILLA 600
DL L Y + ++ + H V R+ +Y+Q +N + Y+ + P +L+
Sbjct: 80 DLFLTYSLSNAYREYIFDGGLPFSKHQV--RVNRYQQKINDLRSAYINLCVPIAQHVLMG 137
Query: 599 VKNNLVLEVNEQKE 558
+ V+ NE+ +
Sbjct: 138 LAKAKVIVCNEEAD 151
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 27.5 bits (58), Expect = 2.5
Identities = 18/87 (20%), Positives = 36/87 (41%)
Frame = -1
Query: 614 KILLAVKNNLVLEVNEQKEAKKRKLEKLISESTPKKLKLISATEKDEGEDTGVSDDEEYE 435
+ILL + +N++ E+N K+ ++ + I + + + E VS +
Sbjct: 279 EILLGLDSNVLKELNITSFGKRFEVLRKIQQLKDSYEQSLYEEYPQFAEPISVSQSSDSS 338
Query: 434 GNYYFKDNDKVENVPRSNESEESGFSD 354
+ K ND+ P + GF+D
Sbjct: 339 SSIPKKSNDEAGGSPSKSSPTRPGFND 365
>SPCC126.14 |prp18||U5 snRNP-associated protein
Prp18|Schizosaccharomyces pombe|chr 3|||Manual
Length = 343
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 572 NEQKEAKKRKLEKLISESTPKKLKLISATEKDEGED 465
+EQ+E KKRKLE+ + KKL++ K+ +
Sbjct: 48 DEQRELKKRKLEEERLKYEEKKLRISRLANKESSRN 83
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -1
Query: 551 KRKLEKLISESTPKKLKLISATEKDEGEDTGVSDDEE 441
++ E ++E KK +++ ++ GED+ DD E
Sbjct: 467 RKAFESRVTEEVTKKERIVQLEDRGAGEDSSDDDDYE 503
>SPAC6B12.11 |drc1|sld1|DNA replication protein
Drc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 27.1 bits (57), Expect = 3.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 404 VENVPRSNESEESGFSDNEDT 342
+E +P +E E+G DNEDT
Sbjct: 266 LEGLPEIDEDAENGIDDNEDT 286
>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 27.1 bits (57), Expect = 3.3
Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Frame = -1
Query: 575 VNEQKEAKKR-KLEKLISESTPKKLKLISAT----EKDEGEDTGVSDDEEYEGNYYFKDN 411
V E ++ K KL K +E +KL+ I+ +K E + G + ++ +EG N
Sbjct: 29 VEENEQVKNLLKLYKEANEEFGEKLQEITKECLKGKKPENTEDGATSNKAFEGLRSEIAN 88
Query: 410 DKVENVPRSNESEESGFSDNEDTVLGETEVDHNKPSTSSQQIVTEDLGMKREITYQIAKN 231
+++ + + E + + +DH++ +SQQ++T + + Y + K
Sbjct: 89 QGKQHIRIAKDLETLIIAP-----FSKMSIDHSQKLQTSQQVLTNQIKSYEKKYYTLKKT 143
Query: 230 K 228
K
Sbjct: 144 K 144
>SPBC336.04 |cdc6|pol3, pold, mis10|DNA polymerase delta catalytic
subunit Cdc6 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1086
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = -1
Query: 803 SKFVK-TNYDLILNY--CTNISFYLLXKSQRVNIQNHPVIKRLYQY 675
SKFV+ + D+++ Y C YLL +++ + I N P++ R++ +
Sbjct: 366 SKFVRDVDPDVLIGYNICNFDIPYLLDRAKSLRIHNFPLLGRIHNF 411
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 27.1 bits (57), Expect = 3.3
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Frame = -1
Query: 572 NEQKEAKKRKLEKLISESTPKKLKLISATEKDEGEDTGVSDDEEYEGNY--YFKDNDKVE 399
N K K K K ++ + K IS E+D+ +D+ SD E EG+ +N+ V+
Sbjct: 85 NASKSGKSNKDHKNLNNT-----KEISLNEEDDSDDSVNSDKLENEGSVGSSIDENELVD 139
Query: 398 -NVPRSNESEESGFSDNEDTVLGETEVDHNKPSTSSQQIVTED 273
+ N+ E S+ T+ + +N +T + ++ D
Sbjct: 140 LDTLLDNDQPEKNESNTASTI-RPPWIGNNDHATDKENLLESD 181
>SPAC1F7.06 |||ThiJ domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 251
Score = 26.6 bits (56), Expect = 4.3
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = -1
Query: 479 DEGEDTGVSDDEEYEGNYYFKDNDKVENVPRSNESEESGFSD---NEDTVLGETEVDHNK 309
D+G++TGV+ + YE F++N ++ ++++ + GF D + ++ ET+ +
Sbjct: 30 DDGDNTGVNVVDLYEAFKVFEENG--FDIVIASDTGDYGFDDKSFRDPAIVDETQSIFSN 87
Query: 308 PSTS 297
P S
Sbjct: 88 PDCS 91
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 26.6 bits (56), Expect = 4.3
Identities = 15/62 (24%), Positives = 34/62 (54%)
Frame = -1
Query: 479 DEGEDTGVSDDEEYEGNYYFKDNDKVENVPRSNESEESGFSDNEDTVLGETEVDHNKPST 300
++ ED GV ++ E+E + + ++V +++++ +SDN+D + E VD S+
Sbjct: 1858 EDSEDDGVYEEMEFEDD----QSGSADSVVSEDDADDVMYSDNDDMNI-EFMVDEQDASS 1912
Query: 299 SS 294
+
Sbjct: 1913 QN 1914
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 26.6 bits (56), Expect = 4.3
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Frame = -1
Query: 476 EGEDTGVSDDEEYEGNYYFKDNDKVENVPRSNESEESGFSDNEDTVLGETEVDHNKPSTS 297
E E+ S+DEE+ ++ E E F+D D + + + +
Sbjct: 373 EDEELEDSEDEEFARQQLLSRKEEEEEEDEEASDFEDSFADFSDGEADDLDESRWRKEAA 432
Query: 296 SQQIVTEDLGMKREITYQIAKNK-GLTPH 213
+ +G K + +Y + NK G+ H
Sbjct: 433 KEHNSLLAVGYKNDRSYVVRNNKIGVFKH 461
>SPBC336.07 |sfc3||transcription factor TFIIIC complex subunit
Sfc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1339
Score = 26.6 bits (56), Expect = 4.3
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 499 SFNF-LGVDSEISFSNLRFLASFCSFTSKTRLFFTARRILSICGLITS 639
SF++ + VDS++S S +A+F S T K RL L GLI S
Sbjct: 622 SFHYPVSVDSQLSHSTGSLMANFSSPTKKRRLESVDFIFLQRKGLILS 669
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 26.6 bits (56), Expect = 4.3
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 521 STPKKLKLISATEKDEGEDTGVSDDEEYEGNYYFKDNDKVE-NVPRSNESE 372
S P+K+ ++S TEK + GV D E+Y Y KV+ P SN +E
Sbjct: 765 SKPEKVPVVSQTEKALPKPLGV-DTEKYYFLRYNNQTRKVKVESPLSNANE 814
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 26.6 bits (56), Expect = 4.3
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = -1
Query: 449 DEEYEGNYYFKDNDKVENVPRSNESEESGFSDNEDTVLGETEVDHNKPSTSSQQIVTE 276
DEE +G ++++V+N E ++ F D+ED + S+ +++ E
Sbjct: 351 DEEDDGEDLESEDEEVDNSDDIVEDGDNAFVDDEDDDKDSVNASNTHRSSGPLEVIVE 408
>SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 436
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -1
Query: 404 VENVPRSNESEESGFSDNEDTVLGETEVDHNKPSTSSQQ 288
V P++N+ E S + ET+ D KP T+ Q+
Sbjct: 205 VPQEPQANQQETSSNQEESSFDRQETQDDKQKPKTTQQE 243
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = -1
Query: 677 YRQMLNKMEPIYLEVIKPQIDKILLAVKNNLVLEVNEQKEAKKRKLEKLISESTPKKLKL 498
YR++L + P+ L+V+ P + +L + NLV ++ + L ++ SE+ L
Sbjct: 452 YREILKLLFPMTLQVVPPPVLVLLRHLAENLVNHISSIYASHSSCLLQVKSETAAIFSNL 511
Query: 497 IS 492
+S
Sbjct: 512 LS 513
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 26.2 bits (55), Expect = 5.7
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -1
Query: 536 KLISESTPKKLKLISATEKDEGE---DTGVSDDEEYEGNYYFKDNDKVENVPRSNESEES 366
K + + T ++ +E EGE T S+DEE + +DN+K E+ +
Sbjct: 663 KFVGQQTLEEFYASETSESSEGEYETSTSESEDEETDDTSQEEDNEKNSTPDEDTENNNT 722
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 5.7
Identities = 22/115 (19%), Positives = 45/115 (39%)
Frame = -1
Query: 623 QIDKILLAVKNNLVLEVNEQKEAKKRKLEKLISESTPKKLKLISATEKDEGEDTGVSDDE 444
+++ V+NN ++ QK ++ L + P + S+ EK+ +DT ++
Sbjct: 386 EVEAPSFVVQNNSAVQPTTQKTSEDST--DLHTNEIPNVAQPPSSFEKENNKDTSKLENP 443
Query: 443 EYEGNYYFKDNDKVENVPRSNESEESGFSDNEDTVLGETEVDHNKPSTSSQQIVT 279
+ + D N P + N +T +E +KPS + +T
Sbjct: 444 DISSSPLSPTEDLFPNDPEEENLFSAALGLNSNTGSQPSET-QSKPSIDPSESIT 497
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 26.2 bits (55), Expect = 5.7
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 10/134 (7%)
Frame = -1
Query: 797 FVKTNYDLILNYCTNISFYLLXKSQRVNIQNHPVIKRLYQYRQMLNKMEPIYLEVIKPQI 618
F+ + Y + N FYLL + R I + +IK + K P L I P++
Sbjct: 701 FIASAYFSLKNEKFENEFYLLAQDLRRKIMSDVIIKTSKHLEEFSEKFIPKKLVKI-PRL 759
Query: 617 DKI----------LLAVKNNLVLEVNEQKEAKKRKLEKLISESTPKKLKLISATEKDEGE 468
K ++ N L E+N+QKE + ++LI KL L+ G+
Sbjct: 760 QKSYAKGLITGHGIIEDYNRLYKELNDQKEVLIKFRDRLIH---LMKLPLLDQESDPTGD 816
Query: 467 DTGVSDDEEYEGNY 426
+ S + + E +Y
Sbjct: 817 EYEESLNAQSEISY 830
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 26.2 bits (55), Expect = 5.7
Identities = 26/118 (22%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Frame = -1
Query: 569 EQKEAK--KRKLEKLISESTPKKLKLISATEKDEGEDTGVSDD-----EEYEGNYYFKDN 411
E+K+ K K ++ K+ I A +KDE D+ ++D E E + K+
Sbjct: 440 EEKDTKITNEDTGKTETDVKAKETDSIEANDKDEKTDSKETEDKVEETESKEADVKAKET 499
Query: 410 DKVE--NVPRSNESEESGF----SDNEDTVLGETEVDHNKPSTSSQQIVTEDLGMKRE 255
D +E + +S+E+ +D++DT + D+ + + ++++ ++D+ K E
Sbjct: 500 DSIEVDDKEEKTDSKETADKVEQTDSKDTNEKPAKDDNKEANEKAEKVDSKDVKEKIE 557
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 26.2 bits (55), Expect = 5.7
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -1
Query: 719 VNIQNHPVIKRLYQYRQMLNKMEPIYLEVIKPQIDKILLAVKNN-LVLEVNEQKEAKKRK 543
+ IQ HP KRL+ + + + P ++ ++ Q+D N+ VL+ + K+RK
Sbjct: 457 IEIQKHPFFKRLH-WNGLRKRAVPPFVPRLENQLDTSYFDDFNDEQVLDAYKDVYEKQRK 515
Query: 542 LEK 534
E+
Sbjct: 516 AEQ 518
>SPCPB1C11.01 |amt1||ammonium transporter Amt1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 497
Score = 26.2 bits (55), Expect = 5.7
Identities = 20/99 (20%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = -1
Query: 812 CAASKF-VKTNYDLILNYCTNISFYLLXKSQRVNIQNHPVIKRLYQYRQMLNKMEPIYLE 636
CAA F V ++NY +S + + + + + + + Y Y+ ++ PI
Sbjct: 394 CAAYSFAVSCALLFVMNYIPGLSLRVSREDEVLGLDKIELGESAYYYKDSTDEPPPITTS 453
Query: 635 VIKPQIDKILLAVKNNLVLEVNEQKEAKKRKLEKLISES 519
++ + + N E Q EA+K + + SE+
Sbjct: 454 GVQYTSPTVSDSASNEKEQEHRAQNEAQKEEEYRAESEA 492
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 25.8 bits (54), Expect = 7.6
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = -1
Query: 407 KVENVPRSNESEESGFSDNEDTVLGETEVDHNKPSTSSQQIVTEDLGMKREITYQIAKNK 228
++EN S+ SE S +DNE+ ++ ST S+++ E+ + E Y A+ +
Sbjct: 86 ELENEGSSSSSESSEITDNEEVASASSK------STKSEELTDEE--SEDEEVYDPARGE 137
Query: 227 GL 222
G+
Sbjct: 138 GI 139
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 25.8 bits (54), Expect = 7.6
Identities = 14/72 (19%), Positives = 29/72 (40%)
Frame = -1
Query: 479 DEGEDTGVSDDEEYEGNYYFKDNDKVENVPRSNESEESGFSDNEDTVLGETEVDHNKPST 300
D+ + DDE G+ ++ ++ V+ ++ E + D+ED + N
Sbjct: 225 DDINNNEYKDDESSSGSESYERDEDVDEEEEEDDDENNDEGDDEDENENDELRSENGSPN 284
Query: 299 SSQQIVTEDLGM 264
S ++ E M
Sbjct: 285 PSAAVINEQENM 296
>SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 830
Score = 25.8 bits (54), Expect = 7.6
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = -1
Query: 572 NEQKEAKKRKLEKLISESTPKKLKLISATEKDEGEDTGVSDDEEYEGNYYFKDNDKVENV 393
+ QK + RK + S S + S G ++ V D+E +GN+ +N
Sbjct: 98 SSQKSSNSRKSIRSQSRSRSSSVGSDSQASIQSGTNSEVVSDDEEDGNFASIPELHEDNE 157
Query: 392 PRSNESEESG-FSDNEDT 342
SN + S FSD +
Sbjct: 158 YHSNLATSSNPFSDGSSS 175
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 7.6
Identities = 21/103 (20%), Positives = 45/103 (43%)
Frame = -1
Query: 581 LEVNEQKEAKKRKLEKLISESTPKKLKLISATEKDEGEDTGVSDDEEYEGNYYFKDNDKV 402
+E++EQ L+K +S + + ++ E+ + +E DK
Sbjct: 109 MEIHEQLANHSLTLQKTLSAFSDQVIEFHKNAERKRKSIKEYAKKQENAYLEAVMQMDKS 168
Query: 401 ENVPRSNESEESGFSDNEDTVLGETEVDHNKPSTSSQQIVTED 273
++ + E+E + DN++T + +V KP +++Q ED
Sbjct: 169 KSRFKGAETEYNRALDNKNTGDSQKKVGFFKPKSNAQLTKLED 211
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 25.8 bits (54), Expect = 7.6
Identities = 22/95 (23%), Positives = 45/95 (47%)
Frame = -1
Query: 446 EEYEGNYYFKDNDKVENVPRSNESEESGFSDNEDTVLGETEVDHNKPSTSSQQIVTEDLG 267
E G+Y +D ++ P S+ + +S F+D+ D + T+V PS ++ + G
Sbjct: 167 ESTNGDYLDEDYVDGQSDPESSNASDSDFADSPDDL---TKVRSPIPSRRGRR-KRKMRG 222
Query: 266 MKREITYQIAKNKGLTPHRKKDQRNPRVKHKLKYR 162
+ + K ++P R ++ +P + KL+ R
Sbjct: 223 PILPVKKNLRVKKAMSPLR-AERNSPDFRRKLRSR 256
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 25.8 bits (54), Expect = 7.6
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Frame = -1
Query: 422 FKDNDKVENVPRS------NESEESGFSDNEDTVLGETEVDHNKPSTSSQQIV 282
F+ V NV R N EES T T V +N+P+T QQ V
Sbjct: 411 FRSGSDVNNVDRKCVKKQMNYREESHTPHGNTTRKTSTPVSNNRPTTPEQQAV 463
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,783,170
Number of Sequences: 5004
Number of extensions: 52092
Number of successful extensions: 321
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 316
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 410448950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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