Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_E22
         (833 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.1  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    22   8.0  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    22   8.0  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    22   8.0  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    22   8.0  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    22   8.0  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    22   8.0  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    22   8.0  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    22   8.0  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    22   8.0  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 288  NCYRRSWNEKRNNISNCKE*RVDT 217
            +C R+   ++RN IS+ +  R+DT
Sbjct: 1649 DCIRQERTQQRNVISDSESGRLDT 1672


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -3

Query: 288 NCYRRSWNEKRNNISNCKE*RVDTPSKERSKKPK 187
           N Y+    E R      KE   D   +ERSK+PK
Sbjct: 48  NSYKNE-REYRKYRETSKERSRDRRERERSKEPK 80


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -3

Query: 288 NCYRRSWNEKRNNISNCKE*RVDTPSKERSKKPK 187
           N Y+    E R      KE   D   +ERSK+PK
Sbjct: 48  NSYKNE-REYRKYRETSKERSRDRRERERSKEPK 80


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -3

Query: 288 NCYRRSWNEKRNNISNCKE*RVDTPSKERSKKPK 187
           N Y+    E R      KE   D   +ERSK+PK
Sbjct: 48  NSYKNE-REYRKYRETSKERSRDRRERERSKEPK 80


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -3

Query: 288 NCYRRSWNEKRNNISNCKE*RVDTPSKERSKKPK 187
           N Y+    E R      KE   D   +ERSK+PK
Sbjct: 48  NSYKNE-REYRKYRETSKERSRDRRERERSKEPK 80


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -3

Query: 288 NCYRRSWNEKRNNISNCKE*RVDTPSKERSKKPK 187
           N Y+    E R      KE   D   +ERSK+PK
Sbjct: 48  NSYKNE-REYRKYRETSKERSRDRRERERSKEPK 80


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -3

Query: 288 NCYRRSWNEKRNNISNCKE*RVDTPSKERSKKPK 187
           N Y+    E R      KE   D   +ERSK+PK
Sbjct: 48  NSYKNE-REYRKYRETSKERSRDRRERERSKEPK 80


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -3

Query: 288 NCYRRSWNEKRNNISNCKE*RVDTPSKERSKKPK 187
           N Y+    E R      KE   D   +ERSK+PK
Sbjct: 48  NSYKNE-REYRKYRETSKERSRDRRERERSKEPK 80


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -3

Query: 288 NCYRRSWNEKRNNISNCKE*RVDTPSKERSKKPK 187
           N Y+    E R      KE   D   +ERSK+PK
Sbjct: 48  NSYKNE-REYRKYRETSKERSRDRRERERSKEPK 80


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -3

Query: 288 NCYRRSWNEKRNNISNCKE*RVDTPSKERSKKPK 187
           N Y+    E R      KE   D   +ERSK+PK
Sbjct: 270 NSYKNE-REYRKYRETSKERSRDRRERERSKEPK 302


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,364
Number of Sequences: 438
Number of extensions: 3712
Number of successful extensions: 30
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)