Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_E21
(737 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 49 6e-07
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 40 5e-04
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 36 0.006
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 35 0.014
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 34 0.018
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 34 0.024
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 33 0.056
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.17
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 31 0.23
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 30 0.40
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 29 0.69
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 29 0.69
SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29 |Schizosa... 29 0.69
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 29 0.69
SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2... 28 1.2
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 28 1.6
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 28 1.6
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 27 2.8
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 2.8
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 27 3.7
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 27 3.7
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 27 3.7
SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces p... 27 3.7
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 4.9
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 26 4.9
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 26 4.9
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 4.9
SPBC365.13c |hba1|caf1|Ran GTPase binding protein Hba1|Schizosac... 26 6.4
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 6.4
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.4
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 8.5
SPAC11H11.03c |||SMR and DUF1771 domain protein|Schizosaccharomy... 25 8.5
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 25 8.5
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 49.2 bits (112), Expect = 6e-07
Identities = 27/119 (22%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Frame = -3
Query: 726 RSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDAD---GK 556
R+ A+ KL E + + + L +++ E ++++L + K+ RL A++ D +
Sbjct: 21 RAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETKQLRLKADNEDIQKTE 80
Query: 555 SDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEE 379
++++SRK+ +E+ELE + ++ K+ + + + + ++SLE + Q++EE
Sbjct: 81 AEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQSLERERDDMEQKLEE 139
Score = 38.3 bits (85), Expect = 0.001
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Frame = -3
Query: 624 ERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEE-- 451
E+++ + EA AE A+ K EV +L+ E E E + ++ ++++ ELEEE
Sbjct: 6 EKINAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETK 65
Query: 450 ---LKVVGNSLKSLEVSE-----EKANQRVEEFXXXXXXXXXXXKXXXXXXXXXEKTVKK 295
LK ++ E + E + +E + E+ V+
Sbjct: 66 QLRLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQS 125
Query: 294 LQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 196
L++E D +E +L D+Y + E+D L
Sbjct: 126 LERERDDMEQKLEEMTDKYTKVKAELDEVHQAL 158
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 39.5 bits (88), Expect = 5e-04
Identities = 27/117 (23%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Frame = -3
Query: 717 TAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSR 538
T+ Q+ E ++ + + + + + ++ +ER++ LT + + A+D++GK VS+
Sbjct: 141 TSSQEKDELEKQVKTLHDLNEQKDKKIKELKERINDLTYDYETLKANADDSEGKQTLVSK 200
Query: 537 KLAFVED---ELEVAEDRVKSGDAKISELEEELKV----VGNSLKSLEVSEEKANQR 388
+ A +E+ +L + E+ + + K++ E++LK + N L +E E+ N+R
Sbjct: 201 REAALEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLENRLLKVEEHEKSLNER 257
Score = 32.3 bits (70), Expect = 0.074
Identities = 23/102 (22%), Positives = 47/102 (46%)
Frame = -3
Query: 684 SADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEV 505
+AD++ ++ R EE +L + E +GK D++ ++ +E+ L
Sbjct: 187 NADDSEGKQTLVSKREAALEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLENRLLK 246
Query: 504 AEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEE 379
E+ KS + + ++L E + N K E E+ A ++ +E
Sbjct: 247 VEEHEKSLNERATKLSEANENFNNRFKEFEEREKSAIKQNKE 288
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 35.9 bits (79), Expect = 0.006
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Frame = -3
Query: 732 EERSGTAQQKLLEAQQSADENNRMCKVLE--NRAQQDEERMDQLTNQLKEARLLAEDADG 559
E+ + K LE E +R LE +R+Q+D++ + +E RLL E A
Sbjct: 520 EKMEREMKNKNLELADMILERDRARHELETMHRSQRDKQESTE-----RELRLLQEKAAS 574
Query: 558 ----KSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEK 400
KS EVS L+ E+ ED + S D +++ L ELK N + L +E+
Sbjct: 575 LERNKSSEVSNLLSRYNTEVAHLEDALHSKDRELANLGVELKSTENRYRQLLQEKEE 631
Score = 35.1 bits (77), Expect = 0.011
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Frame = -3
Query: 726 RSGTAQQKLLEAQQSAD-ENNRMC-----KVLE--NRAQQDEERMDQLTNQLKEARLLAE 571
+ AQQ L AQQ+A+ E RM + LE AQ +++R+ Q QL + + +
Sbjct: 352 QQAAAQQAQLAAQQAAEMERQRMAAQQHQQALEAIQMAQAEQQRIAQ--EQLAQQQFQMQ 409
Query: 570 DADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLK 424
G+ E+ ++L +LE + + DA++ LE EL G +L+
Sbjct: 410 -TQGQLAELEQQLLATRGQLEQSNVLLNQYDARVRTLENELSQAGVNLQ 457
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 34.7 bits (76), Expect = 0.014
Identities = 24/106 (22%), Positives = 46/106 (43%)
Frame = -3
Query: 732 EERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKS 553
+ER L E Q A E + + + +R + ER+ L NQ+ A E +
Sbjct: 866 KERVLQLTNDLQEEQALAHEKDILVERANSRVEVVHERLSSLENQVTIADEKYEFLYAEK 925
Query: 552 DEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLE 415
+ LA + E+ D + + K+S ++++ + + + K LE
Sbjct: 926 QSIEEDLANKQTEISYLSDLSSTLEKKLSSIKKDEQTISSKYKELE 971
Score = 25.4 bits (53), Expect = 8.5
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = -3
Query: 699 LEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVE 520
LEAQ S ++++ K +++ + EER QL NQL ED + L E
Sbjct: 2006 LEAQISKFDDDK--KRIQSSVSRLEERNAQLRNQL-------EDVQASETQWKFALRRTE 2056
Query: 519 DELEVAEDRVKS 484
L+ +RVKS
Sbjct: 2057 HALQEERERVKS 2068
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 34.3 bits (75), Expect = 0.018
Identities = 23/102 (22%), Positives = 50/102 (49%)
Frame = -3
Query: 696 EAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVED 517
EA++ ++ + + E +E +++LT+++ + D + DE+ ++L +E+
Sbjct: 575 EAEREIEKFEKTIRENEESISLFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEE 634
Query: 516 ELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQ 391
E A++ +K S L E+LK+ + SL E+ Q
Sbjct: 635 ENNKAKE---DSTSKTSNLLEQLKMTEAEVDSLRKENEENKQ 673
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 33.9 bits (74), Expect = 0.024
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = -3
Query: 690 QQSADENNRMCKVLENRAQQDE---ERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVE 520
+Q +E N + LE +E E L N+L + + D+D + L V
Sbjct: 1147 EQLTNEKNELIVSLEQSNSNNEALVEERSDLANRLSDMKKSLSDSDNVISVIRSDLVRVN 1206
Query: 519 DELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEK 400
DEL+ + S + SE+ ++ + +SLK E S K
Sbjct: 1207 DELDTLKKDKDSLSTQYSEVCQDRDDLLDSLKGCEESFNK 1246
Score = 29.9 bits (64), Expect = 0.40
Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 11/161 (6%)
Frame = -3
Query: 648 ENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAF----VEDELEVA---EDRV 490
EN QQ+ +D + +L + E + EV+ KL+ + L VA D++
Sbjct: 825 ENLTQQNMTLIDNV-QKLMHKHVNQESKVSELKEVNGKLSLDLKNLRSSLNVAISDNDQI 883
Query: 489 KSGDAKISE----LEEELKVVGNSLKSLEVSEEKANQRVEEFXXXXXXXXXXXKXXXXXX 322
+ A++S+ LE+E + + LKSLE ++ + EE K
Sbjct: 884 LTQLAELSKNYDSLEQESAQLNSGLKSLEAEKQLLHTENEELHIRLDKLTGKLKIEESKS 943
Query: 321 XXXEKTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAE 199
K + Q+E+ L++E S+ ++D T ++
Sbjct: 944 SDLGKKLTARQEEISNLKEENMSQSQAITSVKSKLDETLSK 984
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 32.7 bits (71), Expect = 0.056
Identities = 26/113 (23%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Frame = -3
Query: 711 QQKLLEAQQSADENNRMCKVLENRAQQDEERMDQ-----LTNQLKEARLLAEDADGKSDE 547
Q ++L A ++ N ++ + ++ EER+ + LT L+E+ E D K ++
Sbjct: 436 QLRMLLADADSEMMNLEYEIRQQMTREMEERVSEVERTFLTKLLEESAQGIEYTDQKLEK 495
Query: 546 VSRKLAFVEDELEVAEDRVKSGDAKISELEEELK-VVGNSLKSLEVSEEKANQ 391
+ + ++DE + + + I EL EEL+ + S+K +++ NQ
Sbjct: 496 MGGWMKKLQDENSEKTETIAQLEQIIEELHEELRSLEEESIKESSATQQNENQ 548
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.1 bits (67), Expect = 0.17
Identities = 22/113 (19%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Frame = -3
Query: 708 QKLLEAQQSADENNRMCKVLENRA-QQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKL 532
+KLL+ + + ++E + Q+ R++QLTN+L+ + ++ + + K +E L
Sbjct: 641 EKLLDMAPATPNSKLNTNLIEQTSYQRSLIRLEQLTNELESLKSISRNKEKKFEEAISSL 700
Query: 531 AFVEDELEVAEDRVKSGDA----KISELEEELKVVGNSLKSLEVSEEKANQRV 385
+ +++ + S + K+++LE+ L + S L+ S + +++
Sbjct: 701 QLEKSNIQLQLTSLTSERSLALEKLNDLEKSLVLSERSKDELDESYKSLQEQL 753
Score = 31.1 bits (67), Expect = 0.17
Identities = 31/153 (20%), Positives = 67/153 (43%), Gaps = 2/153 (1%)
Frame = -3
Query: 651 LENRAQQDEERMDQLTNQLKEARLLAEDADGKSD--EVSRKLAFVEDELEVAEDRVKSGD 478
L++ ++ E+ + N+L+ + A DADGK++ + +++ + + E +V++
Sbjct: 1489 LKSEKERTEKELADSKNELEHLQSEAVDADGKTEISNLEKEIHELRSDKEGLVQQVQNLS 1548
Query: 477 AKISELEEELKVVGNSLKSLEVSEEKANQRVEEFXXXXXXXXXXXKXXXXXXXXXEKTVK 298
A+++ L E G SLE ++E A R + + + V
Sbjct: 1549 AELAALREHSPTQG----SLENADEIARLRSQ---LESTKQYYEKEKETEILAARSELVA 1601
Query: 297 KLQKEVDRLEDELGINKDRYKSLADEMDSTFAE 199
+ +K + LE++L R K L ++ +E
Sbjct: 1602 EKEKTKEELENQLNEKSQRIKELEEQAQKNSSE 1634
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 30.7 bits (66), Expect = 0.23
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Frame = -3
Query: 711 QQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGK----SDEV 544
Q KL+EA + +N ++ ++L+ + +E D +TNQ + A A + + E
Sbjct: 623 QGKLIEANE---KNYKLTQLLKTQ----KEDADFITNQYQNASTFAAEQSKEVAKLQAEC 675
Query: 543 SRKLAF---VEDELEVAED-RVKSGDAKISELEEELKVV 439
R A V +E++V D RV++ AK+S LEE LK++
Sbjct: 676 KRLQAINSKVMEEVKVYNDSRVEALLAKVSSLEETLKIL 714
Score = 29.9 bits (64), Expect = 0.40
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Frame = -3
Query: 546 VSRKLAFVEDEL-------EVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQR 388
+ R+L VEDEL V + R + + +IS+L + L+ N+++ L++ EK+ ++
Sbjct: 519 LQRRLRMVEDELHEAINSKNVQQSRSEELEQQISKLTDNLQEYRNTVRELKLDLEKSKKK 578
Query: 387 VEE 379
E+
Sbjct: 579 NED 581
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 29.9 bits (64), Expect = 0.40
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = -3
Query: 732 EERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKS 553
E+RS + Q +L D L+ Q + +D+ ++L+E D +
Sbjct: 966 EQRSQSFQVELSNLTSEYDTTTESIATLKTELQSLNKYVDEHKSRLREFENALWDINSSI 1025
Query: 552 DEVSRKLAFVEDEL-EVAEDRVKSGDAKISELEEELKVVGNS 430
DE+ + + F ++ V +R++ + +I E L VGN+
Sbjct: 1026 DELVKFIEFESKQMNSVKAERIEL-ENQIQEQRTALSEVGNN 1066
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 29.1 bits (62), Expect = 0.69
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -3
Query: 546 VSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRV 385
VSR + + E+ E +K +SELE EL+ S L++ EK +++
Sbjct: 728 VSRSVEDKKKEIGHYESLIKEKQPHLSELEMELRNFVKSRDELQIQVEKVEEKI 781
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 29.1 bits (62), Expect = 0.69
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Frame = -3
Query: 726 RSGTAQQKLLEAQQSADENNR------MCKVLENRAQQDEERMDQLT----NQLKEARLL 577
R AQQ+ + + +E N+ + K+ E ++D+++ +L Q +EA L
Sbjct: 561 REKVAQQRQAKLLEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREAERL 620
Query: 576 AEDADGKSDEVSRKLAFVEDELEVAEDRVK-SGDAKISELEEELKVVGNSLKSLEVSEEK 400
AE A K+ E R+ E + E R+K + K ELE + + K E +K
Sbjct: 621 AEQAAQKALEAKRQ---EEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKK 677
Query: 399 ANQRVE 382
Q +
Sbjct: 678 QQQEAD 683
>SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 29.1 bits (62), Expect = 0.69
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = -3
Query: 501 EDRVKSGDAKISELEEELKVVGNSLKSLEV---SEEKANQR 388
E+R+K+ DA I EE+ K + ++++SLE+ EKAN++
Sbjct: 47 EERIKACDAGIQTSEEQKKELEHTMQSLEMIINVLEKANEK 87
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 29.1 bits (62), Expect = 0.69
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -3
Query: 606 TNQLKEARLLAEDADG---KSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVG 436
+N L E L E+ +G K D ++++ + +ELE R+KS + +SEL +
Sbjct: 516 SNDLNEIHDLREENEGLTLKIDSITKEKDRLINELE---QRIKSYEVNVSELNGTIDEYR 572
Query: 435 NSLKSLE 415
N LK E
Sbjct: 573 NKLKDKE 579
>SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 28.3 bits (60), Expect = 1.2
Identities = 27/112 (24%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Frame = -3
Query: 711 QQKLLEAQQSADENN-RMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRK 535
++K ++ S DE + R K + + ++ + +D L + + + E+ D D R
Sbjct: 13 EEKYVDQDLSEDEEDERFLKAIRS-SRSTKPVVDVLKVKSESSADELEERDAHLDRFRRD 71
Query: 534 LAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSE-EKANQRVE 382
F E E ++ SG ++ +EL+EE NS+K + + E EK + ++
Sbjct: 72 STF---ESETSDHEDFSGGSE-NELDEETTKNANSIKKISLEEVEKQRKAIK 119
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/80 (21%), Positives = 35/80 (43%)
Frame = -3
Query: 690 QQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDEL 511
++S++E + E+ ++ E ++ K+A +ED++ S+ + +E
Sbjct: 40 EESSEEESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESEED 99
Query: 510 EVAEDRVKSGDAKISELEEE 451
D +S SE EEE
Sbjct: 100 SEVSDESESESESESESEEE 119
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 27.9 bits (59), Expect = 1.6
Identities = 30/156 (19%), Positives = 67/156 (42%)
Frame = -3
Query: 681 ADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVA 502
AD+ N+ +L+N+ Q ++ + T+Q + E + +++R + ++
Sbjct: 358 ADDLNKRIMLLKNQKQSLLDKQSR-TSQFTTKKERDEWIRNQLLQINRNINSTKEN---- 412
Query: 501 EDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEEFXXXXXXXXXXXKXXXXXX 322
D +K+ + E+E ELK + K +E+S E R+ + +
Sbjct: 413 SDYLKT---EYDEMENELKAKLSRKKEIEISLESQGDRMSQLLANITSINERKENLTDKR 469
Query: 321 XXXEKTVKKLQKEVDRLEDELGINKDRYKSLADEMD 214
+ KL+ ++ ++D+L ++ K+L MD
Sbjct: 470 KSLWREEAKLKSSIENVKDDLSRSE---KALGTTMD 502
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/62 (20%), Positives = 31/62 (50%)
Frame = -3
Query: 564 DGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRV 385
+ + + V R L E++L++ + + ++ + E+ N L+SLE + + R+
Sbjct: 844 ESELNSVKRSLLKYENKLQIIKSSSSGLEEQMQRINSEISDKRNELESLEELQHEVATRI 903
Query: 384 EE 379
E+
Sbjct: 904 EQ 905
Score = 27.5 bits (58), Expect = 2.1
Identities = 23/109 (21%), Positives = 51/109 (46%)
Frame = -3
Query: 711 QQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKL 532
++++ + E N ++L QQ++E TN +K L + +S ++SR++
Sbjct: 264 EERIERIKAEITELNHSLELLRVEKQQNDE---DYTNIMKSKVAL----ELQSSQLSRQI 316
Query: 531 AFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRV 385
F + + + + ++KISE E EL + ++ + N+R+
Sbjct: 317 EFSKKDESSKLNILSELESKISEKENELSEILPKYNAIVSEADDLNKRI 365
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.1 bits (57), Expect = 2.8
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -3
Query: 522 EDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRV 385
E E E A K D+K S++EEE + ++ E+ EEK N+ +
Sbjct: 15 ETESESANGDTKQDDSKKSQVEEE----EDGIEESELGEEKDNKTI 56
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 27.1 bits (57), Expect = 2.8
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -3
Query: 651 LENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVK 487
L + + +ER+D LTN L E LL E K DE ++ ++L+ E R K
Sbjct: 216 LVDERNEMQERLDILTNLLDELTLLYE--TDKFDETMKEAILSFEDLKEQEIRRK 268
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 26.6 bits (56), Expect = 3.7
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = -3
Query: 669 NRMCKVLEN--RAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAED 496
N + KV EN +A + E+M + EA+ E + +++V+ +L V+D L+ D
Sbjct: 732 NSVLKVKENSIKATNNFEKMLGSRLNVIEAKYKLEKHEMDANQVNARLTEVQDRLKDITD 791
Query: 495 RVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEE 379
++ S E+ + + G+ + SL+ + E
Sbjct: 792 KLASA------REDAMSLYGSVVDSLQTQSSDRQTAITE 824
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 26.6 bits (56), Expect = 3.7
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -1
Query: 629 TRSVWTSSPTN*KRPVSSPRTLTENPTRFRENWPSLKTNSKSPKTVSSLVTLRSQS 462
T VW+++ PVS+P T + + F ++P+ + S S SS S S
Sbjct: 122 TAPVWSNTSV----PVSTPETSATSSSEFFTSYPATSSESSSSYPASSTEVASSYS 173
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 26.6 bits (56), Expect = 3.7
Identities = 18/79 (22%), Positives = 37/79 (46%)
Frame = -3
Query: 612 QLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGN 433
+L + +EA ++ + + D K +E+ E + ++K+ + + LEE K +
Sbjct: 166 ELAKKFEEASQISNKLEKEKDATGSKS--IEELWEEHQKQLKNAGLEPASLEEYQKQWED 223
Query: 432 SLKSLEVSEEKANQRVEEF 376
LKS +S++ V F
Sbjct: 224 FLKSNNISDDPYTSSVNSF 242
>SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 26.6 bits (56), Expect = 3.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -1
Query: 560 ENPTRFRENWPSLKTNSKSPKTVSSLVTLRSQSLKKN*RSSVTPLNLSK 414
EN R ++KT K +T SL+ +S++LKK R V + +K
Sbjct: 7 ENVFPTRMTLTTMKTRLKGAQTGHSLLKRKSEALKKRFREIVVNIEQAK 55
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 644 TGHSRTRSVWTSSPTN*KRPVSSPRTLTENP-TRFRENWPSLKTNSKSPKTVSS 486
+G RT+S+ SP ++P T + P T +E+W + S ++ ++
Sbjct: 406 SGSERTKSLSKESPVEPEKPALPDATSSSTPTTENKESWTNQGIKSSQQRSANA 459
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/75 (21%), Positives = 37/75 (49%)
Frame = -3
Query: 714 AQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRK 535
AQ+KL + + + R+ E R ++ +++Q+TN + L + + D ++
Sbjct: 1078 AQEKLEKLKVEVERRRRLLSEKEERRKELAIKIEQVTNSCSDLEL---RTNAEQDFYAKN 1134
Query: 534 LAFVEDELEVAEDRV 490
F DE++ E+++
Sbjct: 1135 QDFEFDEIKRYEEQL 1149
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 26.2 bits (55), Expect = 4.9
Identities = 25/110 (22%), Positives = 49/110 (44%)
Frame = -3
Query: 732 EERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKS 553
EE +++ E DE + R + +R +Q + E E+ + +
Sbjct: 105 EEADANEEEEEDEEDDEEDEEDEDESGGGRRKRARHDRRNQFLDIEAEVDEDEEELEDEE 164
Query: 552 DEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEE 403
DE+ R+ F+E+ EV D V D + EL+ + + + S+ + ++EE
Sbjct: 165 DEIGREDGFIEE--EVGADYV-GDDRRHRELDRQRQEL-QSVDAERLAEE 210
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 633 AVPCSPTLCTYGCSRQPTAGPRAASV 710
AVP SPTL + QPT P +A+V
Sbjct: 263 AVPLSPTLAVWLPMTQPTFQPPSANV 288
>SPBC365.13c |hba1|caf1|Ran GTPase binding protein
Hba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 399
Score = 25.8 bits (54), Expect = 6.4
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = -3
Query: 564 DGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRV 385
+ K + +S K A E E ++ K K EEE V + E E+K N V
Sbjct: 7 NNKDESISTKNALEEKSNETKDETSKR---KHDPAEEE-SAVSTKVSKSEPLEDKGNAEV 62
Query: 384 EEF 376
+EF
Sbjct: 63 KEF 65
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/58 (22%), Positives = 32/58 (55%)
Frame = -3
Query: 552 DEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEE 379
D+ + + F E + E A + + ++ +LEE+++ L++++ S + QR+E+
Sbjct: 585 DQQTTEAPFEEPD-EPAHEPTEEEQEEMRKLEEKIESTKYGLETIQTSGKTIKQRIEQ 641
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 605 PTN*KRPVSSPRTLTENPTRFRENWPSLKTNSKSPK 498
P+N K PV R+ + R ++NW + S K
Sbjct: 229 PSNVKSPVQQHRSFVSSSARAKKNWGRQSNSPNSNK 264
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 8.5
Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Frame = -3
Query: 732 EERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAED--ADG 559
EE +QK E + +E++ + K +N+A +D++R ++ + + +D
Sbjct: 4009 EEDLLETEQKSNEQSAANNESDLVSKEDDNKALEDKDRQEKEDEEEMSDDVGIDDEIQPD 4068
Query: 558 KSDEVSRKLAFVEDELEVAED---RVKSGD-AKISELEE-ELKVVGNSLKSLEVSEEKAN 394
+ S+ ED L++ ED K GD +K S+LE+ +++ + + + +++
Sbjct: 4069 IQENNSQPPPENEDHLDLPEDLKLDEKEGDVSKDSDLEDMDMEAADENKEEADAEKDEPM 4128
Query: 393 QRVEE 379
Q E+
Sbjct: 4129 QDFED 4133
>SPAC11H11.03c |||SMR and DUF1771 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 206
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/72 (19%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = -3
Query: 696 EAQQSADENNRM-CKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVE 520
EAQ + N+ L + ERM+ Q A L +++ DE+ +++
Sbjct: 24 EAQHAYSAGNKAKAHELSQEGKLCGERMENYNRQAASAIYLYKNSQCNPDEIDLHGLYID 83
Query: 519 DELEVAEDRVKS 484
+ ++ + R+++
Sbjct: 84 EAVQAVQQRIEN 95
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 25.4 bits (53), Expect = 8.5
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = -3
Query: 612 QLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGN 433
Q+T L++ + L + + + D + + + ++ L AED KS + S+ +E+LK
Sbjct: 307 QMTETLEKYKSLDFNMEKEGDVIQQLKSSIKKPLSGAEDEQKS-RSMFSKNDEKLK---- 361
Query: 432 SLKSLEVSEE 403
KSLE+ E+
Sbjct: 362 --KSLELMED 369
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,211,788
Number of Sequences: 5004
Number of extensions: 37730
Number of successful extensions: 265
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 262
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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