Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_E21
(737 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 45 2e-06
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 42 3e-05
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 34 0.005
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 33 0.009
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 30 0.086
AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein. 29 0.20
AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein. 29 0.20
AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein. 29 0.20
AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein. 28 0.35
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 25 3.2
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 24 5.6
AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein. 24 5.6
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 24 5.6
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 23 7.4
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 23 9.8
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 45.2 bits (102), Expect = 2e-06
Identities = 25/110 (22%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Frame = -3
Query: 714 AQQKLLE--AQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVS 541
A QK ++ +Q + N KVL+ + +++D+L+ + + + + ++ +
Sbjct: 875 AMQKNVDRYTEQINEITNSKVKVLQTKINGLGKQIDKLSANISKLTVEIKTSERNVQKSK 934
Query: 540 RKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQ 391
K+ +EDE+E A+ ++ G+ + ++LEEE + L+ ++++ EKA++
Sbjct: 935 DKINSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEKAHE 984
Score = 29.1 bits (62), Expect = 0.15
Identities = 32/184 (17%), Positives = 78/184 (42%), Gaps = 11/184 (5%)
Frame = -3
Query: 729 ERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLK----EARLLAEDAD 562
E +G + +++ + Q A E L+ + + E + +LT +LK E + + D
Sbjct: 763 EPAGASSREIEQMQIRAQEIQTQINYLQEQQGELEATIQRLTAKLKQQEMELKRMHMDVA 822
Query: 561 GKSDEVSRKLAFVEDELE-VAE-----DRVKSGDAKISELEEELKVVGNSLKSLEVSEEK 400
+ ++ R V+ + E VA ++V++ +AK++E ++ +++ + ++
Sbjct: 823 SLTQQMPRLKEQVDWQAERVARTHSDPEKVRALEAKVAECKQAFDSSSTKADAMQKNVDR 882
Query: 399 ANQRVEEFXXXXXXXXXXXKXXXXXXXXXEKT-VKKLQKEVDRLEDELGINKDRYKSLAD 223
+++ E + KL E+ E + +KD+ S+ D
Sbjct: 883 YTEQINEITNSKVKVLQTKINGLGKQIDKLSANISKLTVEIKTSERNVQKSKDKINSMED 942
Query: 222 EMDS 211
E+++
Sbjct: 943 EVEA 946
Score = 25.4 bits (53), Expect = 1.8
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -3
Query: 552 DEVS--RKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVS-EEKANQRVE 382
DEV+ RKL + E E ++ A++ LEE L V L++ + +E AN+ E
Sbjct: 500 DEVTERRKLESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKLQENANEERE 559
Score = 24.6 bits (51), Expect = 3.2
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -3
Query: 726 RSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKE 589
R GT+ Q A + A ++R + ++ RAQ+ + +++ L Q E
Sbjct: 750 RMGTSVQTKTSASEPAGASSREIEQMQIRAQEIQTQINYLQEQQGE 795
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 41.5 bits (93), Expect = 3e-05
Identities = 23/94 (24%), Positives = 48/94 (51%)
Frame = -3
Query: 732 EERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKS 553
EE+ QQ+L+E + DE L+ + +Q +E+M+ + +LK + ++
Sbjct: 842 EEQIAALQQRLVEVSGTTDEMTAAVTALKQQIKQHKEKMNSQSKELKAKYHQRDKLLKQN 901
Query: 552 DEVSRKLAFVEDELEVAEDRVKSGDAKISELEEE 451
DE+ ++ E+E+ + K G +IS +E++
Sbjct: 902 DELKLEIKKKENEITKVRNENKDGYDRISGMEQK 935
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 33.9 bits (74), Expect = 0.005
Identities = 33/133 (24%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Frame = -3
Query: 732 EERSGTAQQKLLEAQQSADE-NNRMCKVLENRAQQDEE--RMD-QLTNQLKE----ARLL 577
++R+ + + AD+ N R+ K +NR ++ E R D LTN+ KE A+L
Sbjct: 1459 KKRANATKNTARDLHHEADQLNGRLAKT-DNRLEEREAQIRKDLNLTNEAKEKVGQAQLN 1517
Query: 576 AEDADGKSDEVSRKLAFVEDEL----EVAEDRVKSGDAKISELEEELK--VVGNSLKSLE 415
+ +A + D+ R+++ + EL E+ + + + ++S E+EL+ + L SL
Sbjct: 1518 SNEAKSQVDKAMREVSLIMSELANLREIDVNSLDDLERRLSAAEKELEDAQLTKRLSSLV 1577
Query: 414 VSEEKANQRVEEF 376
++ NQ + +
Sbjct: 1578 EAKNIQNQNIRSY 1590
Score = 28.7 bits (61), Expect = 0.20
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = -3
Query: 723 SGTAQQKLLEAQQSADENNRMCKVLENRAQQ--DEERMDQLTNQL-KEARLLAEDADGKS 553
S +Q L A++ DE + + A D +++ + NQ +EA +AED K
Sbjct: 1259 SKLTEQALTRAREVNDEALTLFAAVNRTAPPNIDIDKIKKEANQYNREADRIAEDLANKM 1318
Query: 552 DEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEE 379
+ ++ L V +E+AE + + L++E V ++LK L+ ++E+A + V E
Sbjct: 1319 RDHAQLLENVGTNIELAETLLDR-----ASLQKEDAV--DALKQLKYAKEQAEKAVAE 1369
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 33.1 bits (72), Expect = 0.009
Identities = 17/67 (25%), Positives = 35/67 (52%)
Frame = -3
Query: 600 QLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKS 421
+LKE R E+ DG+ K + E++ A+DR+K+ + + ++++ V KS
Sbjct: 231 ELKETRKQLEELDGQRKSSGDKQLLLTQEIQKAQDRLKNAQKALKDAKKDV-VTAKDEKS 289
Query: 420 LEVSEEK 400
+ +E +
Sbjct: 290 VLATEHQ 296
Score = 25.8 bits (54), Expect = 1.4
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -3
Query: 594 KEARLLAEDADGKSDEVSRKLAFVEDELEVAED 496
+E+ L +++GK +++S L +ED L+ E+
Sbjct: 173 EESMNLLRESEGKLEKISEYLRTIEDRLKTLEE 205
Score = 23.8 bits (49), Expect = 5.6
Identities = 18/112 (16%), Positives = 55/112 (49%)
Frame = -3
Query: 711 QQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKL 532
++++ + +E +R + + ++ ++ + KEA+ E+ + ++ + K
Sbjct: 870 EKRIKKVLTDTEEVDRKLSEALKQQKTLQKELESWIQKEKEAQEKLEEDGKRMEKWATKE 929
Query: 531 AFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEEF 376
+ +++ +++ +G + ++ + + SLKSL EKANQ ++++
Sbjct: 930 NMLRQKIDECTEKI-AGLGALPNVDASYQKM--SLKSLFKELEKANQHLKKY 978
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 29.9 bits (64), Expect = 0.086
Identities = 27/135 (20%), Positives = 54/135 (40%), Gaps = 1/135 (0%)
Frame = -3
Query: 597 LKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSL 418
++E L + AD S + L V E + +DR+ S K +++EE K + +
Sbjct: 382 VQEYDRLKQKADATSSKYLIHLDSVNREQKSDQDRLDSEINKKAQIEENYKKIESEKNEA 441
Query: 417 EVSEEKANQRVEEFXXXXXXXXXXXKXXXXXXXXXEKTVKKLQKEVDRLEDELGINK-DR 241
+EK ++ ++ + +LQ E+D + ++LG K D+
Sbjct: 442 LKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVGTSKERIHELQSELDNVREQLGDAKIDK 501
Query: 240 YKSLADEMDSTFAEL 196
++ + EL
Sbjct: 502 HEDARRKKKQEVVEL 516
Score = 27.1 bits (57), Expect = 0.60
Identities = 21/110 (19%), Positives = 47/110 (42%)
Frame = -3
Query: 711 QQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKL 532
+ +L + + + + + + + +DQ+ ++ E + D K ++ +
Sbjct: 722 ENRLKYSMNDLETSKKNINEYDRQLEDFTRELDQIGPKISEIERRMQQRDMKIQDIKESM 781
Query: 531 AFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVE 382
VED++ AE + G A I + EE + L + +E+A +R E
Sbjct: 782 NNVEDDV-YAEFCARIGVANIRQFEE---------RELVLQQERAKKRAE 821
>AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 28.7 bits (61), Expect = 0.20
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = -3
Query: 723 SGTAQQKLLEAQQSADENNRMCKVLENRAQQ--DEERMDQLTNQL-KEARLLAEDADGKS 553
S +Q L A++ DE + + A D +++ + NQ +EA +AED K
Sbjct: 120 SKLTEQALTRAREVNDEALTLFAAVNRTAPPNIDIDKIKKEANQYNREADRIAEDLANKM 179
Query: 552 DEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEE 379
+ ++ L V +E+AE + + L++E V ++LK L+ ++E+A + V E
Sbjct: 180 RDHAQLLENVGTNIELAETLLDR-----ASLQKEDAV--DALKQLKYAKEQAEKAVAE 230
>AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 28.7 bits (61), Expect = 0.20
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = -3
Query: 723 SGTAQQKLLEAQQSADENNRMCKVLENRAQQ--DEERMDQLTNQL-KEARLLAEDADGKS 553
S +Q L A++ DE + + A D +++ + NQ +EA +AED K
Sbjct: 120 SKLTEQALTRAREVNDEALTLFAAVNRTAPPNIDIDKIKKEANQYNREADRIAEDLANKM 179
Query: 552 DEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEE 379
+ ++ L V +E+AE + + L++E V ++LK L+ ++E+A + V E
Sbjct: 180 RDHAQLLENVGTNIELAETLLDR-----ASLQKEDAV--DALKQLKYAKEQAEKAVAE 230
>AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 28.7 bits (61), Expect = 0.20
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = -3
Query: 723 SGTAQQKLLEAQQSADENNRMCKVLENRAQQ--DEERMDQLTNQL-KEARLLAEDADGKS 553
S +Q L A++ DE + + A D +++ + NQ +EA +AED K
Sbjct: 120 SKLTEQALTRAREVNDEALTLFAAVNRTAPPNIDIDKIKKEANQYNREADRIAEDLANKM 179
Query: 552 DEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEE 379
+ ++ L V +E+AE + + L++E V ++LK L+ ++E+A + V E
Sbjct: 180 RDHAQLLENVGTNIELAETLLDR-----ASLQKEDAV--DALKQLKYAKEQAEKAVAE 230
>AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 27.9 bits (59), Expect = 0.35
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = -3
Query: 723 SGTAQQKLLEAQQSADENNRMCKVLENRAQQ--DEERMDQLTNQL-KEARLLAEDADGKS 553
S +Q L A++ DE + + A D +++ + NQ +EA +AED K
Sbjct: 120 SKLTEQALTRAREVNDEALTLFAAVNRTAPPNIDIDKIKKEANQYNREADRIAEDLATKM 179
Query: 552 DEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEE 379
+ ++ L V +E+AE + + L++E V ++LK L+ ++E+A + V E
Sbjct: 180 RDHAQLLENVGTNIELAETLLDR-----ASLQKEDAV--DALKQLKYAKEQAEKAVAE 230
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 24.6 bits (51), Expect = 3.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 662 CAKCWRTGH 636
C KCW TGH
Sbjct: 418 CFKCWETGH 426
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 23.8 bits (49), Expect = 5.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 590 RPVSSPRTLTENPTRFRENWPSLKTNSKSP 501
RP++ TL NPT FR + S S P
Sbjct: 416 RPLTPGGTLPHNPTYFRTVYSSSDDGSIGP 445
>AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein.
Length = 165
Score = 23.8 bits (49), Expect = 5.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 377 NSSTRWLAFSSDTSRDLRELPTTFNSSSSSEILASPD 487
NSST +L +S ++ SSSSS +SPD
Sbjct: 97 NSSTGYLHQHQQSSSSSSSSSSSSMSSSSSSSFSSPD 133
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 23.8 bits (49), Expect = 5.6
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 662 CAKCWRTGHS 633
C KCW+ GH+
Sbjct: 277 CYKCWKVGHT 286
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 23.4 bits (48), Expect = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 609 AGPYAPRPAVPCSPTLCTY 665
A P PR +V C PT C +
Sbjct: 1 ARPQRPRLSVTCRPTKCLH 19
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 23.0 bits (47), Expect = 9.8
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -1
Query: 662 CAKCWRTGH 636
C KCW+ GH
Sbjct: 330 CFKCWKLGH 338
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,467
Number of Sequences: 2352
Number of extensions: 8593
Number of successful extensions: 53
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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