Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_E18
(641 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 136 1e-32
04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700... 91 3e-24
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 89 2e-18
07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 79 3e-15
06_01_0671 - 4899611-4899829,4900870-4901448 68 7e-12
02_01_0691 - 5167260-5167937 37 0.016
01_03_0105 + 12604125-12604583 31 0.59
07_03_0575 - 19637277-19637681 29 2.4
01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710 29 2.4
07_03_1139 + 24254662-24255306 29 3.1
03_05_0554 - 25551220-25551310,25551562-25551695,25552115-255522... 29 4.1
03_02_0602 + 9759055-9759223,9759305-9759455,9759548-9759593,975... 29 4.1
01_06_0813 - 32165310-32165546,32165691-32165783,32166075-321662... 29 4.1
12_01_1057 - 10899871-10899961,10900255-10900411,10901420-109014... 28 5.5
07_01_0478 - 3605306-3605614,3605766-3605906 28 5.5
05_06_0209 - 26389902-26389928,26389981-26390161,26390265-263904... 28 5.5
02_03_0183 + 16106205-16106474 28 5.5
02_02_0154 + 7263707-7263782,7263908-7264248 28 5.5
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 24 6.1
06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764 28 7.2
11_04_0291 - 15851647-15852252,15853995-15854136,15854666-158548... 27 9.6
11_04_0217 + 14979455-14979781 27 9.6
10_02_0086 - 5112095-5112185,5112487-5112599,5113325-5113431,511... 27 9.6
>02_04_0116 +
19901546-19901737,19901825-19901899,19902034-19902115,
19902219-19902298,19903279-19903482,19903625-19903750,
19903872-19903985,19904802-19904918
Length = 329
Score = 136 bits (330), Expect = 1e-32
Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Frame = -2
Query: 487 FTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQ 308
F+HLAW+ T RK GGLG + PLISD + IS+ +GVL + GI RGLFIID + ++
Sbjct: 212 FSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQGIALRGLFIIDKEGVIQH 271
Query: 307 ITINDLPVGRSVEETLRLVQAFQFT-DKHGEVCPANWRPGAKTIKPDTKAAQEYF 146
TIN+L +GRSV+ET+R +QA Q+ D EVCPA W+PG K++KPD K ++EYF
Sbjct: 272 STINNLAIGRSVDETMRTLQALQYVQDNPDEVCPAGWKPGDKSMKPDPKGSKEYF 326
Score = 78.6 bits (185), Expect = 4e-15
Identities = 36/51 (70%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Frame = -2
Query: 640 LSXYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDS 491
LS Y GK YV+LFFYPLDFTFVCPTEI AFS++ DEF K+ E+LG S DS
Sbjct: 92 LSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYDEFEKLNTEILGVSIDS 142
>04_03_0889 +
20568984-20569037,20569271-20569345,20569981-20570088,
20572066-20572179,20572393-20572509
Length = 155
Score = 91.5 bits (217), Expect(2) = 3e-24
Identities = 42/80 (52%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -2
Query: 382 GVLDEETGIPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKH-GEVCPA 206
GV + GI RGLFIID + ++ TIN+L +GRSV+ETLR +QA Q+ ++ EVCPA
Sbjct: 73 GVSIDSVGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPA 132
Query: 205 NWRPGAKTIKPDTKAAQEYF 146
W+PG K++KPD K ++EYF
Sbjct: 133 GWKPGEKSMKPDPKDSKEYF 152
Score = 38.3 bits (85), Expect(2) = 3e-24
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = -2
Query: 583 FVCPTEIIAFSEKADEFRKIGCEVLGASTDS 491
FV EI AFS++ +EF KI EVLG S DS
Sbjct: 48 FVSSAEITAFSDRYEEFEKINTEVLGVSIDS 78
>07_03_1427 +
26495072-26495148,26495323-26495468,26495581-26495729,
26495829-26496224
Length = 255
Score = 89.4 bits (212), Expect = 2e-18
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Frame = -2
Query: 619 YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWINTPRKQGGL 440
YV+LF +P DFT VC TE+ A + A EF K G ++LG S D +H WI
Sbjct: 67 YVILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKDWIKDIEAYKPG 126
Query: 439 GPMNIPLISDKSHRISRDYGVLD----EETG--IPFRGLFIIDDKQNLRQITINDLPVGR 278
+ P+++D S + ++D + G +P R L I+ + ++ + VGR
Sbjct: 127 NRVTYPIMADPSREAIKQLNMVDPDEKDSNGGHLPSRALHIVGPDKKVKLSFLYPACVGR 186
Query: 277 SVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKP 173
+++E +R V A Q KH P NW+PG + + P
Sbjct: 187 NMDEVVRAVDALQTAAKHAVATPVNWKPGERVVIP 221
>07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080
Length = 220
Score = 79.0 bits (186), Expect = 3e-15
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Frame = -2
Query: 619 YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWINTPRKQGGL 440
YV++F +P DFT VC TE+ + A EF K G ++LG S D +H WI
Sbjct: 32 YVIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKDWIKDIEAYKPG 91
Query: 439 GPMNIPLISDKSHRISRDYGVLD---EETG---IPFRGLFIIDDKQNLRQITINDLPVGR 278
+ P+++D R ++D ++T +P R L I+ + ++ + GR
Sbjct: 92 RRVGFPIVADPDREAIRQLNMIDADEKDTAGGELPNRALHIVGPDKKVKLSFLFPACTGR 151
Query: 277 SVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKPDTKAAQE 152
++ E LR A +H P NW+PG + + P + +E
Sbjct: 152 NMAEVLRATDALLTAARHRVATPVNWKPGERVVIPPGVSDEE 193
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 67.7 bits (158), Expect = 7e-12
Identities = 41/133 (30%), Positives = 76/133 (57%), Gaps = 1/133 (0%)
Frame = -2
Query: 640 LSXYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWINT 461
LS +KG+ VV++FYP D T C + AF + ++F+K G EV+G S D +H +
Sbjct: 139 LSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDAASHKEF--- 195
Query: 460 PRKQGGLGPMNIPLISDKSHRISRDYGVLDEETG-IPFRGLFIIDDKQNLRQITINDLPV 284
+K+ L P L+SD+ +++ +++GV + G +P R +++D ++ I N
Sbjct: 196 -KKKYKL-PFT--LLSDEGNKVRKEWGVPADLFGTLPGRQTYVLDKNGVVQYIYNNQFQP 251
Query: 283 GRSVEETLRLVQA 245
+ + ETL+++Q+
Sbjct: 252 EKHIGETLKILQS 264
>02_01_0691 - 5167260-5167937
Length = 225
Score = 36.7 bits (81), Expect = 0.016
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = -2
Query: 625 GKYVVLFFYPLDFTFVCPTEII-AFSEKADEFRKIGCEVLGA-STDSHFTHLAWINTPRK 452
G+ VLF P FT C + + F EKA E G + + S + F AW ++
Sbjct: 95 GRKAVLFAVPGAFTPTCSQKHLPGFIEKAGELHAKGVDAIACVSVNDAFVMRAW----KE 150
Query: 451 QGGLGPMNIPLISDKSHRISRDYGV 377
GLG ++ L+SD + ++R GV
Sbjct: 151 SLGLGDADVLLLSDGNLELTRALGV 175
>01_03_0105 + 12604125-12604583
Length = 152
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -1
Query: 434 HEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADHDQRPA 288
H+H Q +P +LR GR DG H RRQ Q + +PA
Sbjct: 63 HQHKLFYSQPSPPRAKLRLVGRIDGRKEEAAHHSRRQPSLQKEAAAKPA 111
>07_03_0575 - 19637277-19637681
Length = 134
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = +3
Query: 408 LSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTSQPILRNSSAFSENAMISVGHT 581
+ + G P C R V + K ESV A + +L N F NA VG T
Sbjct: 49 IKFLSNKLSGHEPTCKRIVAVGTGSSKSESVVAVDKVESMLCNLDRFEANAQHEVGPT 106
>01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710
Length = 275
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -2
Query: 457 RKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITI 299
+K+ G G N+P D R ++DY +DE+ +P F I D++ + + +
Sbjct: 65 KKKKGSGAGNLPGAIDAEIREAQDYLAIDEQEPVPENFPFEILDEEGMSVVIL 117
>07_03_1139 + 24254662-24255306
Length = 214
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 9/70 (12%)
Frame = -1
Query: 470 DQHAAQAGRTRPHEHSSDKRQVAPHLPRLR---------SAGRGDGHSLPRTLHHRRQAE 318
D A +T P H D PHLP L +AG P HHR ++
Sbjct: 140 DSSALCCPKTPPPAHRPDPATAVPHLPPLGRDPSPSPLPTAGENSTSPTPEREHHRGESP 199
Query: 317 PQADHDQRPA 288
A +RPA
Sbjct: 200 ADAFLARRPA 209
>03_05_0554 -
25551220-25551310,25551562-25551695,25552115-25552221,
25552359-25552437,25552524-25552613,25552790-25553044,
25553388-25553537,25553677-25553976
Length = 401
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 147 KYSWAALVSGLMVLAPGLQ 203
KY W A+ G MVL PGL+
Sbjct: 370 KYRWKAIKGGTMVLGPGLR 388
>03_02_0602 +
9759055-9759223,9759305-9759455,9759548-9759593,
9759974-9760033,9760519-9760555,9761268-9761347,
9761413-9761516,9761613-9761673,9762962-9763019,
9763866-9763918,9764357-9765320,9766131-9766185,
9767223-9768786
Length = 1133
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +3
Query: 345 PRKGMPVSSSSTP*SREMRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTSQ- 521
P P +ST S D + RG+ G PP L C++C SV A +
Sbjct: 369 PSAAAPTGFASTDRSGGAGRDRAFARGICFGDPPPALS----PQYCLRCLSVAAKELADG 424
Query: 522 -PILRNSSAFSENAMISVGHTNVKS 593
P R ++ +++ S T+ S
Sbjct: 425 CPAKRRAAVWTDGCFASFADTSALS 449
>01_06_0813 -
32165310-32165546,32165691-32165783,32166075-32166218,
32166685-32166771,32166858-32167077,32167879-32168039
Length = 313
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +2
Query: 227 LVRELEGLHQPQGLLHRPPHGQVVDRDLPEVLL 325
+VRE E LHQ G P DLPE LL
Sbjct: 117 MVRETEKLHQQVGRYKSPDEHPFFPEDLPEPLL 149
>12_01_1057 -
10899871-10899961,10900255-10900411,10901420-10901498,
10901618-10901707,10903232-10903486,10903674-10903689,
10903907-10903940,10905653-10905884
Length = 317
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 147 KYSWAALVSGLMVLAPGLQ 203
KY W + G MVL PGLQ
Sbjct: 286 KYRWKVIKGGKMVLCPGLQ 304
>07_01_0478 - 3605306-3605614,3605766-3605906
Length = 149
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 374 GRGDGHSLPRTLHHR 330
G DGH LPRTL HR
Sbjct: 4 GGDDGHGLPRTLSHR 18
>05_06_0209 -
26389902-26389928,26389981-26390161,26390265-26390407,
26390480-26390588,26390839-26391023,26391428-26392082,
26392392-26392496,26392757-26392844,26392885-26392947,
26393451-26393513,26394328-26394484
Length = 591
Score = 28.3 bits (60), Expect = 5.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 109 DCWCGVVSSWRR 144
DCWCG + WRR
Sbjct: 8 DCWCGALRLWRR 19
>02_03_0183 + 16106205-16106474
Length = 89
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 424 PLISDKSHRISRDYGVLDEETGIP 353
PL S HR SR +G L E +G P
Sbjct: 59 PLASSHEHRFSRLHGCLPESSGFP 82
>02_02_0154 + 7263707-7263782,7263908-7264248
Length = 138
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 354 GMPVSSSSTP*SREMRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTS 518
G+ +S +T S + C LSL + PS CL+ A + C + AP S
Sbjct: 25 GVIATSKATSKSYKAACTLSLATCLPSLPSDKCLKAAFAAATSLLCLTAGAPPPS 79
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 23.8 bits (49), Expect(2) = 6.1
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = -1
Query: 470 DQHAAQAGRTRPHEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADHDQ 297
DQH + T SS + + P LPR R S +T+H + +A Q
Sbjct: 203 DQHGRGSTATAASSASSPELRPMPPLPRQFQQTRTSMPSTSQTIHEAGAEDKRAPPPQ 260
Score = 22.6 bits (46), Expect(2) = 6.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 611 AVLLSFGLHVRVPDGDHRVLGEG 543
AVLLS G + DGDH G G
Sbjct: 186 AVLLSPGNSTALYDGDHDQHGRG 208
>06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764
Length = 973
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 263 GLLHRPPHGQVVDRDLPEVLLVVDDEESSEGNARLLVQHSVVAGDAVRLVAYQRNVHG 436
G+L +G+VVD L + ++DD E +L +H A +R + R+V G
Sbjct: 841 GVLESNENGRVVDAVLGALCTLMDDAVDVERGVAVLAEHD-AARHVLRALRQHRDVGG 897
>11_04_0291 -
15851647-15852252,15853995-15854136,15854666-15854881,
15854957-15855052,15855147-15855259,15856516-15856727,
15856842-15856939,15857066-15857186,15857291-15857508,
15857657-15857837,15857919-15858207,15858303-15858367,
15858480-15858591
Length = 822
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = -2
Query: 283 GRSVEETLRLVQAFQFTDKHGEV--CPAN 203
G S+EE L LV F D HGE+ C +N
Sbjct: 559 GGSMEEMLNLVALFDKWDDHGEIGFCSSN 587
>11_04_0217 + 14979455-14979781
Length = 108
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 329 VDDEESSEGNARLLVQHSVVAGDAVRLVAYQRNVHGAE 442
+DD+E+ G +L +H VVAG + +R HG +
Sbjct: 67 LDDDENDVGGGHMLCRHGVVAGSDMER-GVKRCSHGVK 103
>10_02_0086 -
5112095-5112185,5112487-5112599,5113325-5113431,
5113782-5113860,5114000-5114089,5114628-5114882,
5117025-5117174,5117634-5117933
Length = 394
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 135 LASPKYSWAALVSGLMVLAPGLQ 203
L S K SW A+ G M L+PGL+
Sbjct: 359 LPSHKSSWKAIKGGRMALSPGLR 381
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,139,248
Number of Sequences: 37544
Number of extensions: 288898
Number of successful extensions: 1171
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -