Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_E18
(641 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putat... 209 1e-54
At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)... 209 1e-54
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 81 6e-16
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 75 5e-14
At1g80910.1 68414.m09493 expressed protein 33 0.12
At3g55120.1 68416.m06121 chalcone-flavanone isomerase / chalcone... 32 0.28
At1g16020.2 68414.m01922 expressed protein 32 0.37
At1g16020.1 68414.m01921 expressed protein 32 0.37
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 31 0.86
At3g57570.1 68416.m06410 expressed protein 30 1.5
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 29 2.0
At4g16146.1 68417.m02449 expressed protein 28 6.1
At4g28395.1 68417.m04064 lipid transfer protein, putative identi... 27 8.0
>At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putative
very strong similarity to SP|Q96291 2-cys peroxiredoxin
BAS1, chloroplast precursor {Arabidopsis thaliana};
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 273
Score = 209 bits (511), Expect = 1e-54
Identities = 97/167 (58%), Positives = 126/167 (75%), Gaps = 2/167 (1%)
Frame = -2
Query: 640 LSXYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWIN 464
LS Y GK YV+LFFYPLDFTFVCPTEI AFS++ +EF K+ EVLG S DS F+HLAW+
Sbjct: 104 LSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRYEEFEKLNTEVLGVSVDSVFSHLAWVQ 163
Query: 463 TPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITINDLPV 284
T RK GGLG +N PL+SD + IS+ +GVL + GI RGLFIID + ++ TIN+L +
Sbjct: 164 TDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGI 223
Query: 283 GRSVEETLRLVQAFQFTDKH-GEVCPANWRPGAKTIKPDTKAAQEYF 146
GRSV+ET+R +QA Q+ ++ EVCPA W+PG K++KPD K ++EYF
Sbjct: 224 GRSVDETMRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYF 270
>At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)
identical to SP|Q96291 2-cys peroxiredoxin BAS1,
chloroplast precursor {Arabidopsis thaliana}; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 266
Score = 209 bits (511), Expect = 1e-54
Identities = 98/167 (58%), Positives = 125/167 (74%), Gaps = 2/167 (1%)
Frame = -2
Query: 640 LSXYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWIN 464
LS Y GK YV+LFFYPLDFTFVCPTEI AFS++ EF K+ EVLG S DS F+HLAW+
Sbjct: 97 LSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSEFEKLNTEVLGVSVDSVFSHLAWVQ 156
Query: 463 TPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITINDLPV 284
T RK GGLG +N PLISD + IS+ +GVL + GI RGLFIID + ++ TIN+L +
Sbjct: 157 TDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQGIALRGLFIIDKEGVIQHSTINNLGI 216
Query: 283 GRSVEETLRLVQAFQFTDKH-GEVCPANWRPGAKTIKPDTKAAQEYF 146
GRSV+ET+R +QA Q+ ++ EVCPA W+PG K++KPD K ++EYF
Sbjct: 217 GRSVDETMRTLQALQYIQENPDEVCPAGWKPGEKSMKPDPKLSKEYF 263
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 81.0 bits (191), Expect = 6e-16
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Frame = -2
Query: 631 YKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWINTPRK 452
+ + VLF +P DFT VC TE+ A ++ A EF K G ++LG S D +H WI
Sbjct: 28 FANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLGLSCDDVQSHKDWIKDIEA 87
Query: 451 QGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITINDLPVGRSV 272
+N P+I+D + I ++D P R L I+ ++ + GR++
Sbjct: 88 FNHGSKVNYPIIADPNKEIIPQLNMIDPIENGPSRALHIVGPDSKIKLSFLYPSTTGRNM 147
Query: 271 EETLRLVQAFQFTDKHGE--VCPANWRP 194
+E LR + + KH P NW+P
Sbjct: 148 DEVLRALDSLLMASKHNNKIATPVNWKP 175
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 74.5 bits (175), Expect = 5e-14
Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 1/133 (0%)
Frame = -2
Query: 640 LSXYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWINT 461
L YKGK VVL+FYP D T C + AF + ++F+K G EV+G S D +H A+ +
Sbjct: 90 LKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSASHKAFASK 149
Query: 460 PRKQGGLGPMNIPLISDKSHRISRDYGVLDEETG-IPFRGLFIIDDKQNLRQITINDLPV 284
+ + L+SD+ +++ +D+GV + G +P R +++D ++ I N
Sbjct: 150 YK-------LPYTLLSDEGNKVRKDWGVPGDLFGALPGRQTYVLDKNGVVQLIYNNQFQP 202
Query: 283 GRSVEETLRLVQA 245
+ ++ETL+ ++A
Sbjct: 203 EKHIDETLKFLKA 215
>At1g80910.1 68414.m09493 expressed protein
Length = 497
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Frame = -2
Query: 613 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 488
+LFFYP D TF +I SE F ++ CEV+ A SH
Sbjct: 33 ILFFYPPDLTFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 79
>At3g55120.1 68416.m06121 chalcone-flavanone isomerase / chalcone
isomerase (CHI) identical to SP|P41088
Length = 246
Score = 32.3 bits (70), Expect = 0.28
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +3
Query: 195 GLQLAGHTSPCLSVNWKACTSRRVSSTDLPTGRSLIVICLRFCLSSMMKSPRKGMPVSSS 374
G+ L G+ P LSV WK T+ ++ + +P R ++ + MK P G S
Sbjct: 62 GVYLEGNAVPSLSVKWKGKTTEELTES-IPFFREIVTGAFEKFIKVTMKLPLTGQQYSEK 120
Query: 375 ST 380
T
Sbjct: 121 VT 122
>At1g16020.2 68414.m01922 expressed protein
Length = 502
Score = 31.9 bits (69), Expect = 0.37
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = -2
Query: 613 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 488
+LFFYP D F +I SE F ++ CEV+ A SH
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 77
>At1g16020.1 68414.m01921 expressed protein
Length = 515
Score = 31.9 bits (69), Expect = 0.37
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = -2
Query: 613 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 488
+LFFYP D F +I SE F ++ CEV+ A SH
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 77
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 30.7 bits (66), Expect = 0.86
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -1
Query: 236 HGQARRGVPRQLEARRQDHQARHQGRPGVLRRRQLDTTPHQQ 111
H Q ++ +Q + ++Q Q +HQ +P +++Q T HQQ
Sbjct: 134 HHQQQQQQQQQQQQQQQQQQQQHQNQPPSQQQQQQSTPQHQQ 175
>At3g57570.1 68416.m06410 expressed protein
Length = 1057
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 195 GLQLAGHTSPCLSVNWKACTSRRVSSTDLPTGRSLIVICLRFCLSSMMKSPRKGMPVSSS 374
G + +T CL + C+S STD+ T + + I R C+++++ S + P SS
Sbjct: 875 GYSVLDYTIHCLIEDRSNCSSIPKLSTDILTCENPLPIPFRLCMANVIISACQKNPESSK 934
Query: 375 ST 380
T
Sbjct: 935 KT 936
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2
Query: 631 YKGKYVVLFFYPLDFTFVCPTE-IIAFSEKADEFRKIGCE-VLGASTDSHFTHLAW 470
+KGK VV+F P +T VC + + ++ D+F+ G + V+ S + F W
Sbjct: 71 FKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSVNDPFAINGW 126
>At4g16146.1 68417.m02449 expressed protein
Length = 102
Score = 27.9 bits (59), Expect = 6.1
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 454 KQGGLGPMNIPLISDKSHRI---SRDYGVLDEETGIPFRGLFIID 329
K GGL P PLIS S R S D+ +L +E I R + I+
Sbjct: 25 KYGGLVPKKKPLISKDSKRAFFDSADWALLKQEASIDQRTIAAIE 69
>At4g28395.1 68417.m04064 lipid transfer protein, putative identical
to anther-specific gene ATA7 [gi:2746339]; contains Pfam
protease inhibitor/seed storage/LTP family domain
Length = 180
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 396 MRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCES 497
M C + + G+F PSP C RGV VK S
Sbjct: 77 MPC-MGFVEGIFQQPSPDCCRGVTHLNNVVKFTS 109
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,887,346
Number of Sequences: 28952
Number of extensions: 211924
Number of successful extensions: 871
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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