BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_pT_E17 (800 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 236 1e-62 Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 236 1e-62 Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 236 1e-62 AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical ... 32 0.42 Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 31 0.96 U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 31 0.96 U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 30 1.7 U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 30 2.2 AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 30 2.2 U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 29 2.9 U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like ... 29 3.9 AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to SU... 29 3.9 AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 29 5.1 Z70754-3|CAA94773.1| 293|Caenorhabditis elegans Hypothetical pr... 28 8.9 Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 8.9 Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 28 8.9 U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical pr... 28 8.9 >Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical protein F17C11.9c protein. Length = 365 Score = 236 bits (578), Expect = 1e-62 Identities = 105/157 (66%), Positives = 123/157 (78%), Gaps = 1/157 (0%) Frame = -2 Query: 712 FDXMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKVFMSC 536 F MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L FMSC Sbjct: 210 FQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSC 269 Query: 535 NLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYESYDW 356 NLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L F LS DWQVDYESY W Sbjct: 270 NLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYESYTW 329 Query: 355 KKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 245 KLD S+ TKK V +Y W G D G+KFNQGKIFK Sbjct: 330 TKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 365 >Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical protein F17C11.9b protein. Length = 373 Score = 236 bits (578), Expect = 1e-62 Identities = 105/157 (66%), Positives = 123/157 (78%), Gaps = 1/157 (0%) Frame = -2 Query: 712 FDXMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKVFMSC 536 F MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L FMSC Sbjct: 218 FQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSC 277 Query: 535 NLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYESYDW 356 NLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L F LS DWQVDYESY W Sbjct: 278 NLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYESYTW 337 Query: 355 KKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 245 KLD S+ TKK V +Y W G D G+KFNQGKIFK Sbjct: 338 TKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 373 >Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical protein F17C11.9a protein. Length = 398 Score = 236 bits (578), Expect = 1e-62 Identities = 105/157 (66%), Positives = 123/157 (78%), Gaps = 1/157 (0%) Frame = -2 Query: 712 FDXMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKVFMSC 536 F MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L FMSC Sbjct: 243 FQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSC 302 Query: 535 NLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYESYDW 356 NLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L F LS DWQVDYESY W Sbjct: 303 NLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYESYTW 362 Query: 355 KKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 245 KLD S+ TKK V +Y W G D G+KFNQGKIFK Sbjct: 363 TKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 398 >AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical protein K02F6.2 protein. Length = 361 Score = 32.3 bits (70), Expect = 0.42 Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Frame = -2 Query: 679 DDFKRVYSNEDEAKSIPYFWEKFDPENYSIW-YAEYKYPEELAKVFMSCNLITGMFQRLD 503 D+ V+ N+ + K P + KF PENY +W Y +E ++ ++S + ++ + Sbjct: 42 DELLAVF-NKFKGKKFPRKFPKFGPENYKVWCYVNELDKDETSEYYISRTEFSKLYAG-N 99 Query: 502 KMRKQAFASVCLFGEDNNSTIS 437 +RK A+ + E+ N +++ Sbjct: 100 VVRKVEDATHIVLPENENGSVT 121 >Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical protein F13G3.8 protein. Length = 423 Score = 31.1 bits (67), Expect = 0.96 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +3 Query: 408 SSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 518 S F H TP+++ LL N T C I+ +WN Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382 >U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. Length = 423 Score = 31.1 bits (67), Expect = 0.96 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +3 Query: 408 SSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 518 S F H TP+++ LL N T C I+ +WN Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382 >U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical protein K07E12.1b protein. Length = 12268 Score = 30.3 bits (65), Expect = 1.7 Identities = 10/18 (55%), Positives = 15/18 (83%) Frame = -2 Query: 400 PLSSDWQVDYESYDWKKL 347 PL D QVD+++Y+W+KL Sbjct: 2672 PLGPDGQVDFQNYEWQKL 2689 >U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. Length = 192 Score = 29.9 bits (64), Expect = 2.2 Identities = 12/38 (31%), Positives = 17/38 (44%) Frame = +3 Query: 405 TSSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 518 T +P T + + + PN D CL IL N W+ Sbjct: 60 TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97 >AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin conjugating enzyme protein1 protein. Length = 192 Score = 29.9 bits (64), Expect = 2.2 Identities = 12/38 (31%), Positives = 17/38 (44%) Frame = +3 Query: 405 TSSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 518 T +P T + + + PN D CL IL N W+ Sbjct: 60 TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97 >U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical protein F53B3.2 protein. Length = 634 Score = 29.5 bits (63), Expect = 2.9 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -3 Query: 309 TTSRGTEPTKTVESSTRARYSSECRPTSS 223 TT+ T PT T E ST A+ S+ +PT++ Sbjct: 218 TTTTSTFPTSTTEKSTTAQPSTTTKPTTT 246 >U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like protease protein 1 protein. Length = 697 Score = 29.1 bits (62), Expect = 3.9 Identities = 10/31 (32%), Positives = 16/31 (51%) Frame = -1 Query: 242 NADQRPANVYTFHTITIKNFTKKKHSNVNRW 150 N D + +Y F+T N K +++V RW Sbjct: 534 NGDSKYPKIYAFNTFFYSNIVSKGYASVKRW 564 >AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to SUMO-1-specific protease protein. Length = 697 Score = 29.1 bits (62), Expect = 3.9 Identities = 10/31 (32%), Positives = 16/31 (51%) Frame = -1 Query: 242 NADQRPANVYTFHTITIKNFTKKKHSNVNRW 150 N D + +Y F+T N K +++V RW Sbjct: 534 NGDSKYPKIYAFNTFFYSNIVSKGYASVKRW 564 >AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical protein Y8A9A.2 protein. Length = 1360 Score = 28.7 bits (61), Expect = 5.1 Identities = 9/26 (34%), Positives = 13/26 (50%) Frame = -3 Query: 432 CGCGAERSSCSRCRLIGRWTTSPTTG 355 C C + + CRL+ W+ TTG Sbjct: 696 CSCNGDTTESENCRLLSSWSEWTTTG 721 >Z70754-3|CAA94773.1| 293|Caenorhabditis elegans Hypothetical protein F58E6.3 protein. Length = 293 Score = 27.9 bits (59), Expect = 8.9 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = -3 Query: 309 TTSRGTEPTKTVESSTRARYSSECRPTSSQCIHISYNNYKKLYKKETFKCK*VDVGNFRN 130 T +G K E + + + S+ + CI + N+KK+Y + KCK VGN + Sbjct: 197 TYQQGANTAKMCEWTNQCKASTHNCHWLAACIDLPDENHKKMY---SCKCKPGFVGNGFH 253 Query: 129 C 127 C Sbjct: 254 C 254 >Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical protein K01A6.2 protein. Length = 1092 Score = 27.9 bits (59), Expect = 8.9 Identities = 8/25 (32%), Positives = 16/25 (64%) Frame = -2 Query: 649 DEAKSIPYFWEKFDPENYSIWYAEY 575 D+ + +P WE+ D +NY +Y ++ Sbjct: 327 DDPRELPPGWEQVDDQNYGTFYVDH 351 >Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical protein M195.2 protein. Length = 419 Score = 27.9 bits (59), Expect = 8.9 Identities = 14/49 (28%), Positives = 22/49 (44%) Frame = -3 Query: 501 KCANRLSHPSACLVKTTIPPSLECGCGAERSSCSRCRLIGRWTTSPTTG 355 KC+ + + + +P + CGC A S + CR R T S + G Sbjct: 4 KCSTSTNISNRVCSCSPLPSTSSCGCQASSSCANSCRSTCRPTCSSSGG 52 >U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical protein D1014.5 protein. Length = 727 Score = 27.9 bits (59), Expect = 8.9 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = -3 Query: 306 TSRGTEPTKTVESSTRARYSSECRPTSSQCIHISYNNYKKLYKKETFKCK 157 T + TE T TVE++ R ++Q SYN K KK KCK Sbjct: 334 TKKVTEETTTVETTERQNVDDTTENQTTQTTSSSYN--AKEEKKSYRKCK 381 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,928,806 Number of Sequences: 27780 Number of extensions: 406185 Number of successful extensions: 1492 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1376 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1485 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1956310428 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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