Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_E16
(526 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10 |Schizo... 174 8e-45
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 0.14
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 30 0.24
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 29 0.42
SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|c... 27 1.3
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.3
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc... 26 4.0
SPBP35G2.11c |||transcription related zf-ZZ type zinc finger pro... 26 4.0
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 25 5.2
SPBC428.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 6.9
SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces... 25 9.1
>SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 174 bits (423), Expect = 8e-45
Identities = 84/167 (50%), Positives = 115/167 (68%), Gaps = 2/167 (1%)
Frame = -2
Query: 525 KFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDP 346
K + VF K NGTVTA NASTLNDG K L +KP+A+I+G+ + DP
Sbjct: 230 KLKSVRAVF-KSNGTVTAANASTLNDGASALVLMSAAKVKELGLKPLAKIIGWGEAAQDP 288
Query: 345 IDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVS 166
F +P++AIPK L+ G+ V +EINEAFSVVAVAN K+LGLDP ++N++GG V+
Sbjct: 289 ERFTTSPSLAIPKALKHAGIEASQVDYYEINEAFSVVAVANTKILGLDPERVNINGGGVA 348
Query: 165 LGHPIGMSGARIVVHLCHAL--KKGEKGVASICNGGGGASSVMIEKM 31
+GHP+G SG+RI+ L + L K + GVA++CNGGGGASS++IE++
Sbjct: 349 MGHPLGSSGSRIICTLAYILAQKDAKIGVAAVCNGGGGASSIVIERV 395
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 30.7 bits (66), Expect = 0.14
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Frame = +2
Query: 170 TAPPCTLIFDGSNPNNF*FATATTLKASFISHNATSSFL--TPVFSNNLGMA--TAGAIG 337
+A P + S+ + A+++T +S S + TSS L + + S++L + T+ ++
Sbjct: 101 SASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLA 160
Query: 338 KSMGSHSPSANPTIRAIGLTFNLLAAS-AVINTKAAAPSFN 457
S + + SA PT A + + AAS + ++ A+ S N
Sbjct: 161 SSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLN 201
Score = 28.7 bits (61), Expect = 0.56
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +2
Query: 227 ATATTLKASFISHNATSSFLTPVFSNNLGMATAGAIGKSMGSHSPSANPTIRAIGLTFNL 406
+T++T +S S ATS+ TP+ S N AT+ + +S SA + N
Sbjct: 337 STSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANS 396
Query: 407 LAASAVINTKAAAPSFNVEA-LPAVTV 484
+++V +T APS+N + LP +V
Sbjct: 397 TTSTSVSST---APSYNTSSVLPTSSV 420
Score = 27.9 bits (59), Expect = 0.98
Identities = 25/93 (26%), Positives = 46/93 (49%)
Frame = +2
Query: 227 ATATTLKASFISHNATSSFLTPVFSNNLGMATAGAIGKSMGSHSPSANPTIRAIGLTFNL 406
AT+++L ++ S++ATSS L N+ ATA + S + S SA + +L
Sbjct: 176 ATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSS--------SL 227
Query: 407 LAASAVINTKAAAPSFNVEALPAVTVPFSFWNT 505
++S T A A S ++ + + + P + N+
Sbjct: 228 ASSSLNSTTSATATSSSISSTVSSSTPLTSSNS 260
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 29.9 bits (64), Expect = 0.24
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -2
Query: 315 IPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSL 163
+ KL +TG + ++L ++NE S KL DPS++ + G V L
Sbjct: 628 LTKLNYETGKTENRLSLLQLNEQLSCSPADRAKLTLFDPSRLLIFKGVVKL 678
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 29.1 bits (62), Expect = 0.42
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +2
Query: 212 NNF*FATATTLKASFISHNATSSFLTPVFSNNLGMATAGAIGKSMGSH 355
N F F TA A N S LTPVFS + MA+A A ++ +H
Sbjct: 259 NQFSFNTAANPFAFAKKENEESKPLTPVFSFSTTMASADASKETKQTH 306
>SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 865
Score = 27.5 bits (58), Expect = 1.3
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 234 AVANQKLLGLD-PSKINVHGGAVSLGHPIGMSGARIVVHLCHALK 103
+++++ LL +D P+ + + G L + S A + VH+CHA+K
Sbjct: 194 SMSSRSLLIMDIPTTMRSNNGLSILASRLKSSEAPMHVHICHAIK 238
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 26.6 bits (56), Expect = 2.3
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = +2
Query: 191 IFDGSNPNNF*FATATTLKASFISHNATSSFLTPVFSNNLGMATAGAIGKSMGSHSPSAN 370
I+ ++ ++ +TAT +S S +++SS TP+ S+++ + + + S+ S S S++
Sbjct: 133 IYSSTSASSTSSSTATPSSSSTTSSSSSSSSSTPI-SSSITSSISSSASSSVSSSSASSS 191
Query: 371 PTI 379
+I
Sbjct: 192 GSI 194
>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 721
Score = 25.8 bits (54), Expect = 4.0
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2
Query: 156 PIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMIE 37
P G+SG I+V LC A E +I G G +S+ IE
Sbjct: 229 PKGLSGKDIIVSLCGAFNHDEVLNHAIEFYGEGLNSLSIE 268
>SPBP35G2.11c |||transcription related zf-ZZ type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 397
Score = 25.8 bits (54), Expect = 4.0
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 71 LQIEATPFSPFFKAWH-RCTTMRAPDIPIG*PKLTAPPCTLIFDGSNPNNF 220
L +E +P PF+K WH R T+ ++ P+ + +F G NP +F
Sbjct: 285 LPLELSPGCPFYKIWHIRNTSCQSWPSPL---YVKFNGGDKLFPGDNPYSF 332
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.4 bits (53), Expect = 5.2
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Frame = +2
Query: 149 PIG*PKLTAPP-CTLIFDGSNPNNF*FATATTLKASFISHNATSSFLTPVFSNNLGMATA 325
P P PP C + SNP ATA + H + + +TP NN TA
Sbjct: 207 PYSSPTSYPPPLCPATYCPSNPPQLAPATAIAPSSQSSQHKSVNYSVTPSSINN---HTA 263
Query: 326 GAIGKSMGSHSPSANPTIR 382
+ ++ P PT +
Sbjct: 264 VPLSPTLAVWLPMTQPTFQ 282
>SPBC428.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 115
Score = 25.0 bits (52), Expect = 6.9
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 203 SNPNNF*FATATTLKASFISHNATSSFLTPVFSNNLGMATAGAI 334
+NP+ F T + SF + +SFL +F+ NLG++ AI
Sbjct: 22 TNPDQV-FQTVENVGKSFEKYE--TSFLKSLFNGNLGLSLPSAI 62
>SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 720
Score = 24.6 bits (51), Expect = 9.1
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 151 WYVWSSHCCTSVPCFKKRRKGSC 83
W+VW+ CT +P K+ +C
Sbjct: 401 WWVWAESRCTEIPESKRTVFPNC 423
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,057,170
Number of Sequences: 5004
Number of extensions: 40054
Number of successful extensions: 132
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 214353836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -