Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_E16
(526 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0075 + 3916373-3916400,3916760-3916858,3916943-3917116,391... 167 4e-42
01_01_0071 + 548255-548399,548478-548651,548787-548892,548992-54... 137 4e-33
10_08_0258 + 16261454-16261540,16261636-16261712,16262734-162628... 114 4e-26
02_05_1230 - 35099942-35100018,35100138-35100221,35100367-351004... 111 4e-25
03_05_0254 + 22425038-22425197,22426042-22429307,22430420-22431112 30 0.99
02_04_0317 + 21996324-21996681,21996833-21996859,21997299-219982... 29 2.3
01_03_0075 - 12218501-12218611,12219028-12219267,12219698-122198... 29 2.3
06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 29 3.0
01_06_1505 + 37827495-37827977,37828424-37828914,37828997-37829819 29 3.0
07_03_1412 - 26392239-26392826 28 4.0
05_01_0090 + 598311-599597,599884-599997,600186-600450,600994-60... 28 4.0
04_03_0192 + 12474614-12474665,12475100-12475152,12475793-12476032 28 5.3
02_03_0122 - 15491106-15491509,15492668-15492695 28 5.3
11_01_0596 + 4755453-4755490,4755675-4756047,4757739-4758940,475... 27 7.0
08_02_0769 - 21012521-21013331,21013692-21013821,21013915-21014047 27 9.2
06_03_0661 + 23225514-23227073 27 9.2
03_06_0662 + 35377974-35378270,35378354-35378623,35378795-353789... 27 9.2
02_05_0568 - 30034280-30034393,30034888-30035163,30035246-300353... 27 9.2
02_02_0415 - 9981345-9981440,9981716-9981784,9982035-9982155,998... 27 9.2
01_06_1224 - 35508842-35510404 27 9.2
01_05_0495 + 22705697-22705765,22705903-22706025,22708429-227085... 27 9.2
01_01_0428 + 3250204-3251724 27 9.2
>09_02_0075 +
3916373-3916400,3916760-3916858,3916943-3917116,
3917207-3917312,3917671-3917809,3918457-3918534,
3918863-3918928,3919213-3919298,3919939-3920038,
3920245-3920355,3920457-3920498,3920671-3920757,
3921013-3921102
Length = 401
Score = 167 bits (407), Expect = 4e-42
Identities = 89/165 (53%), Positives = 111/165 (67%), Gaps = 2/165 (1%)
Frame = -2
Query: 525 KFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDP 346
K KL F++ GTVTAGNAS+++DG A+ L ++ IARI GFAD P
Sbjct: 235 KLKKLRPSFKENGGTVTAGNASSISDGAAALVLVSGQKAQELGLQVIARIKGFADAAQAP 294
Query: 345 IDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVS 166
F +PA+AIPK L G+ V +EINEAFS VA+ANQKLLG+ KINVHGGAVS
Sbjct: 295 ELFTTSPALAIPKALANAGLESSRVDYYEINEAFSAVALANQKLLGIPSEKINVHGGAVS 354
Query: 165 LGHPIGMSGARIVVHLCHAL--KKGEKGVASICNGGGGASSVMIE 37
LGHP+G SGARI+V L L K G+ GVA +CNGGGGAS++++E
Sbjct: 355 LGHPLGCSGARILVTLLGVLREKGGKIGVAGVCNGGGGASALVLE 399
>01_01_0071 +
548255-548399,548478-548651,548787-548892,548992-549130,
549216-549293,549395-549460,550061-550201,550417-550527,
550614-550655,550739-550825,551033-551118,551681-551684
Length = 392
Score = 137 bits (332), Expect = 4e-33
Identities = 72/141 (51%), Positives = 93/141 (65%), Gaps = 2/141 (1%)
Frame = -2
Query: 453 NDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKED 274
+DG AK L ++ IARI G+AD P F PA+AIPK + G++
Sbjct: 250 SDGAAAIVLVSGQKAKSLGLQVIARIRGYADAAQAPELFTTTPALAIPKAVSNAGLQTSQ 309
Query: 273 VALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHAL--KK 100
+ +EINEAFSVVA+ANQKLLG+ K+N+ GG VSLGHPIG SGARI+V L L K
Sbjct: 310 IDYYEINEAFSVVALANQKLLGIPSGKLNLSGGGVSLGHPIGCSGARIIVTLLGILRHKN 369
Query: 99 GEKGVASICNGGGGASSVMIE 37
G+ GVA +CNGGGGAS++++E
Sbjct: 370 GKIGVAGVCNGGGGASALVVE 390
>10_08_0258 +
16261454-16261540,16261636-16261712,16262734-16262818,
16262931-16263057,16263147-16263245,16263343-16263410,
16263514-16263621,16263727-16263804,16263921-16264053,
16264138-16264234,16264465-16264588,16264668-16264776,
16264899-16264982,16265071-16265180
Length = 461
Score = 114 bits (275), Expect = 4e-26
Identities = 67/166 (40%), Positives = 97/166 (58%), Gaps = 4/166 (2%)
Frame = -2
Query: 519 TKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPID 340
+KL F K+ GT TAGNAS ++DG A + + + FA DP
Sbjct: 273 SKLKPAFSKD-GTTTAGNASQVSDGAGAVLLMRRDIAMQKGLPIVGVFRSFAAVGVDPAI 331
Query: 339 FPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLG 160
+ PAVAIP ++ G++ +DV L+EINEAF+ V K LGLDP+K+NV+GGA++LG
Sbjct: 332 MGVGPAVAIPAAVKAAGLQIDDVDLFEINEAFASQYVYCCKKLGLDPAKVNVNGGAMALG 391
Query: 159 HPIGMSGARIVVHLCHALKKGEK----GVASICNGGGGASSVMIEK 34
HP+G +GAR V L + +K+ K GV S+C G G ++ + E+
Sbjct: 392 HPLGATGARSVSTLLNEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
>02_05_1230 -
35099942-35100018,35100138-35100221,35100367-35100475,
35100564-35100687,35101157-35101253,35101375-35101507,
35101654-35101731,35101821-35101928,35102011-35102078,
35102181-35102279,35102379-35102505,35102623-35102707,
35103297-35103373,35103482-35103562
Length = 448
Score = 111 bits (266), Expect = 4e-25
Identities = 63/165 (38%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Frame = -2
Query: 516 KLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDF 337
KL VF+K+ GT TAGN+S ++DG A + + + FA DP
Sbjct: 272 KLKPVFRKD-GTTTAGNSSQVSDGAGAVLLMRRDVAMKKGLPILGVFRSFAAVGVDPAVM 330
Query: 336 PIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGH 157
+ PAVAIP ++ G++ ED+ L+E+NEAF+ V LGLD SK+NV+GGA++LGH
Sbjct: 331 GVGPAVAIPAAVKSAGLQIEDIDLFELNEAFASQFVYCCNKLGLDRSKVNVNGGAIALGH 390
Query: 156 PIGMSGARIVVHLCHALKKGEK----GVASICNGGGGASSVMIEK 34
P+G +GAR V L + +K+ + GV ++C G G ++ + E+
Sbjct: 391 PLGATGARCVATLLNEMKRRGRDCRFGVVTMCIGSGMGAAAVFER 435
>03_05_0254 + 22425038-22425197,22426042-22429307,22430420-22431112
Length = 1372
Score = 30.3 bits (65), Expect = 0.99
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +2
Query: 239 TLKASFISHNATSSFLTPVFSNNLGMATAGAIGKSMGSHSPSANPTIRAIGLTFNLLAAS 418
T + + N+T L V NLG ++AG +G S + ++ + G NL +
Sbjct: 1172 TQSGAELDANSTVEVLGEVLGTNLGASSAGNLGVS----AIRSDERVGLAGDARNLRLGT 1227
Query: 419 AVINTKAAAPSFNVEALPA 475
++ N + + S VE LPA
Sbjct: 1228 SMPNLSSDSASAQVEVLPA 1246
>02_04_0317 +
21996324-21996681,21996833-21996859,21997299-21998227,
21998317-21999162
Length = 719
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 80 EATPFSPFFKAWHRCTTMRAPDIPIG*PKLTAP 178
+ PF+ F W RC M P P+ PK AP
Sbjct: 168 DGCPFTMFAPFWDRCLCMPDPAAPLLPPKRIAP 200
>01_03_0075 -
12218501-12218611,12219028-12219267,12219698-12219815,
12219949-12220016,12220124-12220375,12221362-12221463,
12221734-12221802,12221892-12221987,12222161-12222208,
12222352-12222479,12222818-12222896,12223651-12223797,
12223956-12224022,12224655-12224830,12225588-12225755,
12225879-12225992,12226657-12226722,12227306-12227524,
12228142-12228321,12228481-12228584,12228998-12229277,
12230582-12231004
Length = 1084
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -2
Query: 252 EAFSVVAVANQKLLGLDPSKINVHGGAV 169
EAF+VV A++++LGL P + + GG V
Sbjct: 142 EAFAVVREASKRVLGLRPFDVQLIGGMV 169
>06_03_1490 +
30497980-30498102,30499034-30500156,30500914-30501132,
30501228-30501454,30501810-30501884,30502250-30502321,
30502765-30502863,30502975-30503046,30503131-30503245,
30503455-30503523,30503625-30503952,30504320-30504437,
30504522-30505448
Length = 1188
Score = 28.7 bits (61), Expect = 3.0
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Frame = +2
Query: 272 TSSFLTPVFSNNLGMATAGAIGKSM------GSHSPSANPTIRAIGLTFNLLAASAVIN- 430
TS T S + +ATAG +S GSH+P++ +++A NLL++ N
Sbjct: 202 TSQTPTRGVSPQVNLATAGIPTQSSTPIAGYGSHTPASTTSVKANSADLNLLSSPPAAND 261
Query: 431 TKAAAPSFN 457
+KA P N
Sbjct: 262 SKALVPLGN 270
>01_06_1505 + 37827495-37827977,37828424-37828914,37828997-37829819
Length = 598
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +2
Query: 350 SHSPSANPTIRAIGL----TFNLLAASAVINTKA--AAPSFNVEALPAVTVPFSFWNTVD 511
S +P T++ IG+ + L+ SA++ T+ A F + P T+P SFW V
Sbjct: 429 SKNPRGITTLQRIGIGLIISVILMVVSALVETRRLMVARDFGLVDNPEATIPMSFWWVVP 488
Query: 512 NXV 520
+
Sbjct: 489 QFI 491
>07_03_1412 - 26392239-26392826
Length = 195
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 336 PIAPAVAIPKLLEKTGVRKEDVALWEINEAFS 241
P+ A+P LE+T VR + V L+ EAF+
Sbjct: 88 PMTEGRALPPSLEETAVRAQGVYLYNSKEAFN 119
>05_01_0090 +
598311-599597,599884-599997,600186-600450,600994-601109
Length = 593
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -2
Query: 180 GGAVSLGHPIGMSGARIVVHLCHA--LKKGEKGVASICNGGGGASSVM 43
GG S+GH + G H L +AS GGGG +SV+
Sbjct: 43 GGCNSIGHILSFDGRDAPAFAIHGVLLPSNPSTMASTGGGGGGGASVL 90
>04_03_0192 + 12474614-12474665,12475100-12475152,12475793-12476032
Length = 114
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -2
Query: 177 GAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSV 46
G + IG G+ + V A + G+KG A +C GG ++ V
Sbjct: 54 GGKNAATQIGGEGSDVRVLQAAAAQMGKKGAAHVCITGGSSTDV 97
>02_03_0122 - 15491106-15491509,15492668-15492695
Length = 143
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 138 ARIVVHLCHALKKGEKGVASICNGG 64
AR+ VHL H +K +GVA C GG
Sbjct: 2 ARLAVHLVHLRRKPARGVA--CGGG 24
>11_01_0596 +
4755453-4755490,4755675-4756047,4757739-4758940,
4759026-4759392
Length = 659
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = -2
Query: 303 LEKTGVRKEDVALWEINEAFSVVAVANQKLL-GLDPSKINVHGGAVSLGHPIGMSGARIV 127
+E +E+ +++E + + ++ L D GGA SLG G G
Sbjct: 1 MEDASRGEEENSMFETSHVLGALLASSPLLARAWDRCAAAADGGASSLGFVHGGGGGGEG 60
Query: 126 VHLCHALKKGEKGVASICNGGGGA 55
+C A + +++ GGGGA
Sbjct: 61 EPVCVAFSGVQAALSAAAGGGGGA 84
>08_02_0769 - 21012521-21013331,21013692-21013821,21013915-21014047
Length = 357
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 167 LTAPPCTLIFDGSNPNNF*FATATTLKASFISHN 268
L +P TL F GSN + F+T T L+ S + N
Sbjct: 210 LESPTSTLTFAGSNASMLPFSTTTALELSESNSN 243
>06_03_0661 + 23225514-23227073
Length = 519
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -2
Query: 318 AIPKLLEKTGVRKEDVALWEIN 253
AI +LLEKTGV+ +D+ + +N
Sbjct: 188 AIDQLLEKTGVKPKDIGVVVVN 209
>03_06_0662 +
35377974-35378270,35378354-35378623,35378795-35378973,
35380073-35380116,35380295-35380384,35380472-35380588,
35380679-35380803,35380883-35381155,35381253-35381386,
35381518-35381604,35381714-35381831
Length = 577
Score = 27.1 bits (57), Expect = 9.2
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1
Query: 307 FRNGNRWCYR 336
+RNG RWCYR
Sbjct: 568 YRNGERWCYR 577
>02_05_0568 -
30034280-30034393,30034888-30035163,30035246-30035371,
30035595-30035753,30035893-30036063,30036374-30036493,
30036565-30036924,30038800-30039686,30039790-30040363,
30041379-30041507,30042423-30042494,30042572-30042728,
30042974-30043023,30043569-30044327
Length = 1317
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/70 (27%), Positives = 26/70 (37%)
Frame = +2
Query: 59 PPPPLQIEATPFSPFFKAWHRCTTMRAPDIPIG*PKLTAPPCTLIFDGSNPNNF*FATAT 238
PPPP + P P +HR + P P+ P + P + NP A A
Sbjct: 45 PPPPSAAYSYP--PATPPFHRAPFLHYPQDPMAAPHMPRPVISFPMPTPNPAAIPSAAAA 102
Query: 239 TLKASFISHN 268
A+ S N
Sbjct: 103 AAAAAGPSQN 112
>02_02_0415 -
9981345-9981440,9981716-9981784,9982035-9982155,
9982441-9982622,9983320-9984921
Length = 689
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -2
Query: 192 INVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSV 46
IN++ AV G +G ++++LC + G A N G G +S+
Sbjct: 197 INLYDSAVKEGIKMGQHHYSVLLYLCSSAALGFVQPAKSGNAGSGIASI 245
>01_06_1224 - 35508842-35510404
Length = 520
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 53 DAPPPPLQIEATPFSP 100
DAPPPP ++ P+SP
Sbjct: 13 DAPPPPPELSHPPYSP 28
>01_05_0495 + 22705697-22705765,22705903-22706025,22708429-22708586,
22709162-22709206,22709367-22709445,22709522-22709595,
22709703-22709809,22711116-22711301,22711882-22711920,
22712020-22712086,22712207-22712281,22713113-22713347,
22713425-22713755,22714530-22714710,22714810-22714950,
22715041-22715302,22715503-22715892,22717179-22717735,
22718421-22718557,22718672-22718853,22718959-22719339,
22719420-22719545,22719635-22719700,22720056-22721839,
22721914-22722193,22722386-22722616,22723067-22723588,
22723683-22723815,22723937-22724193
Length = 2405
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 222 QKLLGLDPSKINVHGGAVSL 163
QKLLG DP K+NV V+L
Sbjct: 1463 QKLLGADPEKVNVSINLVAL 1482
>01_01_0428 + 3250204-3251724
Length = 506
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +2
Query: 239 TLKASFISHNATSSFLTPVFSNNLGMATAGAIGKSMGSHSPSANPTIRAI 388
+L+ +SHN S P F + + T G ++ H PS+ ++++
Sbjct: 281 SLRTLDLSHNPNLSINLPEFPDGNNLETLGLAATNLSYHIPSSFANLKSL 330
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,983,538
Number of Sequences: 37544
Number of extensions: 308685
Number of successful extensions: 1139
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1154538620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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