Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_E16
(526 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative ... 173 8e-44
At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative ... 173 8e-44
At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative ... 173 8e-44
At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative ... 173 8e-44
At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative ... 164 3e-41
At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative ... 164 3e-41
At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative ... 116 7e-27
At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative ... 115 2e-26
At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 / 3-keto... 114 3e-26
At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 / 3-keto... 114 3e-26
At2g43800.1 68415.m05445 formin homology 2 domain-containing pro... 31 0.47
At4g01800.1 68417.m00237 preprotein translocase secA subunit, pu... 29 1.9
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 29 2.5
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 29 2.5
At1g56020.1 68414.m06431 expressed protein 29 2.5
At1g69280.1 68414.m07943 expressed protein 28 4.4
At3g57380.1 68416.m06387 expressed protein contains Pfam domain,... 27 5.8
At1g50620.1 68414.m05688 PHD finger family protein contains Pfam... 27 5.8
At1g16040.1 68414.m01925 expressed protein similar To Phosphatid... 27 5.8
At4g00230.1 68417.m00025 subtilisin-like serine endopeptidase (X... 27 7.7
At3g61130.1 68416.m06841 glycosyl transferase family 8 protein c... 27 7.7
At1g22750.2 68414.m02843 expressed protein 27 7.7
At1g22750.1 68414.m02842 expressed protein 27 7.7
>At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 406
Score = 173 bits (420), Expect = 8e-44
Identities = 90/167 (53%), Positives = 116/167 (69%), Gaps = 2/167 (1%)
Frame = -2
Query: 525 KFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDP 346
K KL F+++ G+VTAGNAS+++DG A L + IA+I G+AD P
Sbjct: 240 KLKKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLHVIAKIRGYADAAQAP 299
Query: 345 IDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVS 166
F PA+AIPK +++ G+ V +EINEAFSVVA+ANQKLLGLDP ++N HGGAVS
Sbjct: 300 ELFTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVS 359
Query: 165 LGHPIGMSGARIVVHLCHAL--KKGEKGVASICNGGGGASSVMIEKM 31
LGHP+G SGARI+V L L KKG+ GVASICNGGGGAS++++E M
Sbjct: 360 LGHPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLEFM 406
>At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 405
Score = 173 bits (420), Expect = 8e-44
Identities = 90/167 (53%), Positives = 116/167 (69%), Gaps = 2/167 (1%)
Frame = -2
Query: 525 KFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDP 346
K KL F+++ G+VTAGNAS+++DG A L + IA+I G+AD P
Sbjct: 239 KLKKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLHVIAKIRGYADAAQAP 298
Query: 345 IDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVS 166
F PA+AIPK +++ G+ V +EINEAFSVVA+ANQKLLGLDP ++N HGGAVS
Sbjct: 299 ELFTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVS 358
Query: 165 LGHPIGMSGARIVVHLCHAL--KKGEKGVASICNGGGGASSVMIEKM 31
LGHP+G SGARI+V L L KKG+ GVASICNGGGGAS++++E M
Sbjct: 359 LGHPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLEFM 405
>At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 415
Score = 173 bits (420), Expect = 8e-44
Identities = 90/167 (53%), Positives = 116/167 (69%), Gaps = 2/167 (1%)
Frame = -2
Query: 525 KFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDP 346
K KL F+++ G+VTAGNAS+++DG A L + IA+I G+AD P
Sbjct: 239 KLKKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLHVIAKIRGYADAAQAP 298
Query: 345 IDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVS 166
F PA+AIPK +++ G+ V +EINEAFSVVA+ANQKLLGLDP ++N HGGAVS
Sbjct: 299 ELFTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVS 358
Query: 165 LGHPIGMSGARIVVHLCHAL--KKGEKGVASICNGGGGASSVMIEKM 31
LGHP+G SGARI+V L L KKG+ GVASICNGGGGAS++++E M
Sbjct: 359 LGHPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLEFM 405
>At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 405
Score = 173 bits (420), Expect = 8e-44
Identities = 90/167 (53%), Positives = 116/167 (69%), Gaps = 2/167 (1%)
Frame = -2
Query: 525 KFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDP 346
K KL F+++ G+VTAGNAS+++DG A L + IA+I G+AD P
Sbjct: 239 KLKKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLHVIAKIRGYADAAQAP 298
Query: 345 IDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVS 166
F PA+AIPK +++ G+ V +EINEAFSVVA+ANQKLLGLDP ++N HGGAVS
Sbjct: 299 ELFTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVS 358
Query: 165 LGHPIGMSGARIVVHLCHAL--KKGEKGVASICNGGGGASSVMIEKM 31
LGHP+G SGARI+V L L KKG+ GVASICNGGGGAS++++E M
Sbjct: 359 LGHPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLEFM 405
>At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 403
Score = 164 bits (399), Expect = 3e-41
Identities = 83/165 (50%), Positives = 112/165 (67%), Gaps = 2/165 (1%)
Frame = -2
Query: 525 KFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDP 346
K KL F++ GTVTAGNAS+++DG A +L + +A+I G+ D +P
Sbjct: 237 KLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKALQLGLLVLAKIKGYGDAAQEP 296
Query: 345 IDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVS 166
F APA+AIPK + G+ V +EINEAF+VVA+ANQKLLG+ P K+NV+GGAVS
Sbjct: 297 EFFTTAPALAIPKAIAHAGLESSQVDYYEINEAFAVVALANQKLLGIAPEKVNVNGGAVS 356
Query: 165 LGHPIGMSGARIVVHLCHALKK--GEKGVASICNGGGGASSVMIE 37
LGHP+G SGARI++ L LKK G+ GV +CNGGGGAS++++E
Sbjct: 357 LGHPLGCSGARILITLLGILKKRNGKYGVGGVCNGGGGASALVLE 401
>At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 398
Score = 164 bits (399), Expect = 3e-41
Identities = 83/165 (50%), Positives = 112/165 (67%), Gaps = 2/165 (1%)
Frame = -2
Query: 525 KFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDP 346
K KL F++ GTVTAGNAS+++DG A +L + +A+I G+ D +P
Sbjct: 232 KLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKALQLGLLVLAKIKGYGDAAQEP 291
Query: 345 IDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVS 166
F APA+AIPK + G+ V +EINEAF+VVA+ANQKLLG+ P K+NV+GGAVS
Sbjct: 292 EFFTTAPALAIPKAIAHAGLESSQVDYYEINEAFAVVALANQKLLGIAPEKVNVNGGAVS 351
Query: 165 LGHPIGMSGARIVVHLCHALKK--GEKGVASICNGGGGASSVMIE 37
LGHP+G SGARI++ L LKK G+ GV +CNGGGGAS++++E
Sbjct: 352 LGHPLGCSGARILITLLGILKKRNGKYGVGGVCNGGGGASALVLE 396
>At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 462
Score = 116 bits (280), Expect = 7e-27
Identities = 67/165 (40%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Frame = -2
Query: 516 KLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDF 337
KL VF+K+ GT TAGN+S ++DG A + + + FA DP
Sbjct: 275 KLKPVFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIM 333
Query: 336 PIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGH 157
I PAVAIP ++ G+ +D+ L+EINEAF+ V + LGLDP KINV+GGA+++GH
Sbjct: 334 GIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGH 393
Query: 156 PIGMSGARIVVHLCHALKKGEK----GVASICNGGGGASSVMIEK 34
P+G +GAR V L H +K+ K GV S+C G G ++ + E+
Sbjct: 394 PLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFER 438
>At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 443
Score = 115 bits (276), Expect = 2e-26
Identities = 67/165 (40%), Positives = 94/165 (56%), Gaps = 4/165 (2%)
Frame = -2
Query: 516 KLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDF 337
KL VF KE+GT TAGN+S L+DG A + + + F+ DP
Sbjct: 267 KLKPVF-KEDGTTTAGNSSQLSDGAGAVLLMRRNVAMQKGLPILGVFRTFSAVGVDPAIM 325
Query: 336 PIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGH 157
+ PAVAIP ++ G+ DV L+EINEAF+ V + LGLD KINV+GGA+++GH
Sbjct: 326 GVGPAVAIPAAVKAAGLELNDVDLFEINEAFASQFVYCRNKLGLDAEKINVNGGAIAIGH 385
Query: 156 PIGMSGARIVVHLCHALKKGEK----GVASICNGGGGASSVMIEK 34
P+G +GAR V L H +K+ K GV S+C G G ++ + E+
Sbjct: 386 PLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGSGMGAAAVFER 430
>At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 457
Score = 114 bits (275), Expect = 3e-26
Identities = 71/172 (41%), Positives = 98/172 (56%), Gaps = 5/172 (2%)
Frame = -2
Query: 516 KLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDF 337
KL TVF K+NG+ TAGNAS ++DG A + + + FA +P
Sbjct: 276 KLKTVF-KQNGSTTAGNASQISDGAGAVLLMKRSLAMKKGLPILGVFRSFAVTGVEPSVM 334
Query: 336 PIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGH 157
I PAVAIP + G+ D+ L+EINEAF+ V + K L LD K+NV+GGA+++GH
Sbjct: 335 GIGPAVAIPAATKLAGLNVSDIDLFEINEAFASQYVYSCKKLELDMEKVNVNGGAIAIGH 394
Query: 156 PIGMSGARIVVHLCHALKKGEK----GVASICNGGG-GASSVMIEKM*VDNI 16
P+G +GAR V L H +K+ K GV S+C G G GA++V VDN+
Sbjct: 395 PLGATGARCVATLLHEMKRRGKDCRFGVISMCIGTGMGAAAVFERGDSVDNL 446
>At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 414
Score = 114 bits (275), Expect = 3e-26
Identities = 71/172 (41%), Positives = 98/172 (56%), Gaps = 5/172 (2%)
Frame = -2
Query: 516 KLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDF 337
KL TVF K+NG+ TAGNAS ++DG A + + + FA +P
Sbjct: 233 KLKTVF-KQNGSTTAGNASQISDGAGAVLLMKRSLAMKKGLPILGVFRSFAVTGVEPSVM 291
Query: 336 PIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGH 157
I PAVAIP + G+ D+ L+EINEAF+ V + K L LD K+NV+GGA+++GH
Sbjct: 292 GIGPAVAIPAATKLAGLNVSDIDLFEINEAFASQYVYSCKKLELDMEKVNVNGGAIAIGH 351
Query: 156 PIGMSGARIVVHLCHALKKGEK----GVASICNGGG-GASSVMIEKM*VDNI 16
P+G +GAR V L H +K+ K GV S+C G G GA++V VDN+
Sbjct: 352 PLGATGARCVATLLHEMKRRGKDCRFGVISMCIGTGMGAAAVFERGDSVDNL 403
>At2g43800.1 68415.m05445 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 894
Score = 31.1 bits (67), Expect = 0.47
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Frame = +2
Query: 29 YIFSIITDDAPPPPLQIEATPFSPFFKAWHRCT-TMRAPDIPIG*PKLTAPPCTLIFDGS 205
++FS + + PPPP PF P + AP P P A +L+F
Sbjct: 79 HLFSSVANPPPPPPSPPHPNPFFPSSDPTSTASHPPPAPPPPASLPTFPANISSLLFPTH 138
Query: 206 N-----PNNF*FATATTLKASFISHNATSS 280
N P+N A T+ AS IS A S
Sbjct: 139 NKQSKPPSNGHIARLVTITASVISAAALLS 168
>At4g01800.1 68417.m00237 preprotein translocase secA subunit,
putative similar to preprotein translocase secA subunit,
chloroplast [precursor] SP:Q9SYI0 from [Arabidopsis
thaliana]; non-consensus GA donor splice site at exon 4
Length = 1022
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -2
Query: 252 EAFSVVAVANQKLLGLDPSKINVHGGAV 169
EAF+VV A++++LGL P + + GG V
Sbjct: 140 EAFAVVREASKRVLGLRPFDVQLIGGMV 167
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -1
Query: 505 GIPKGKWHC-YCRQCFNIK 452
G+PK +WHC C Q FN K
Sbjct: 83 GVPKSEWHCSRCVQAFNGK 101
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -1
Query: 505 GIPKGKWHC-YCRQCFNIK 452
G+PK +WHC C Q FN K
Sbjct: 344 GVPKSEWHCSRCVQAFNGK 362
>At1g56020.1 68414.m06431 expressed protein
Length = 398
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 50 DDAPPPPLQIEATPFSPFFKAWHRCTTMRAPDIPIG*PKLTAPPCTLIFDGSNPNN 217
DD P L ++ +PF + + P I + P+ PP T DGS+ ++
Sbjct: 220 DDLPRLSLDLDKPSANPFAPSRTHSRNLNQPRIRLAKPRRNHPPSTPSVDGSSSSS 275
>At1g69280.1 68414.m07943 expressed protein
Length = 400
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 7/30 (23%)
Frame = -1
Query: 187 CTWWSCQFGSS-------NWYVWSSHCCTS 119
C W SC + SS +W WS CC+S
Sbjct: 339 CRWPSCDYNSSCGWLFCCHWSCWSCCCCSS 368
>At3g57380.1 68416.m06387 expressed protein contains Pfam domain,
PF04577: Protein of unknown function (DUF563)
Length = 504
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 108 LKKGEKGVASICNGGGGASSVMI 40
+KKGEK S+ GG GAS+V +
Sbjct: 8 IKKGEKHRLSVEEGGSGASAVTV 30
>At1g50620.1 68414.m05688 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 629
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -1
Query: 511 VYGIPKGKWHC-YCRQCFNIK 452
+ G+PK +WHC C Q +N K
Sbjct: 357 IKGVPKSEWHCSRCVQLYNGK 377
>At1g16040.1 68414.m01925 expressed protein similar To
Phosphatidylinositol-glycan biosynthesis, class F
protein (PIG-F). (Mouse) (SP:O09101) [Mus musculus];
contains six transmembrane domains;
Length = 226
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -2
Query: 252 EAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVH 121
E S + L+GL + GAVSLG PIGM +H
Sbjct: 80 EKCSYFRAVGRSLVGLIAGALINALGAVSLGAPIGMQSLSKTIH 123
>At4g00230.1 68417.m00025 subtilisin-like serine endopeptidase
(XSP1) identical to subtilisin-type serine endopeptidase
XSP1 GI:6708179 from [Arabidopsis thaliana]
Length = 749
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 174 AVSLGHPIG-MSGARIVVHLCHALKKGEKGVASICNGGGGASSV 46
++S+G PI S I V HA++KG VAS N G + +V
Sbjct: 278 SISIGGPIADYSSDSISVGSFHAMRKGILTVASAGNDGPSSGTV 321
>At3g61130.1 68416.m06841 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 673
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 111 ALKKGEKGVASICNGGGGASSVMI 40
ALK+G GV I GGG+ SV++
Sbjct: 2 ALKRGLSGVNRIRGSGGGSRSVLV 25
>At1g22750.2 68414.m02843 expressed protein
Length = 247
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 17 MLSTYIFSIITDDAPPPPLQIEATPF 94
ML+T +++IITD P P Q TP+
Sbjct: 21 MLATLVYTIITDGLPLPDRQDVFTPW 46
>At1g22750.1 68414.m02842 expressed protein
Length = 244
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 17 MLSTYIFSIITDDAPPPPLQIEATPF 94
ML+T +++IITD P P Q TP+
Sbjct: 21 MLATLVYTIITDGLPLPDRQDVFTPW 46
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,956,929
Number of Sequences: 28952
Number of extensions: 225599
Number of successful extensions: 773
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 967280384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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