BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_pT_E14 (755 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L23764-1|AAB00099.1| 79|Drosophila melanogaster adipokinetic h... 31 1.7 AE014296-775|AAF47846.1| 79|Drosophila melanogaster CG1171-PA ... 31 1.7 Y00843-1|CAA68766.1| 410|Drosophila melanogaster protein ( Dros... 29 9.1 BT025227-1|ABF17918.1| 418|Drosophila melanogaster FI01011p pro... 29 9.1 AY119136-1|AAM50996.1| 418|Drosophila melanogaster RE37758p pro... 29 9.1 AE014134-1019|AAF52323.2| 418|Drosophila melanogaster CG11607-P... 29 9.1 >L23764-1|AAB00099.1| 79|Drosophila melanogaster adipokinetic hormone protein. Length = 79 Score = 31.1 bits (67), Expect = 1.7 Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 6/56 (10%) Frame = -2 Query: 604 EAQLTFTPGWGQ---GKRSEAT--DYRNDGC-SSEDSVYTIYKLIKNEAEKFLACQ 455 + QLTF+P WG+ G T + + C +S + + I++ ++++A+ FL C+ Sbjct: 21 QCQLTFSPDWGKRSVGGAGPGTFFETQQGNCKTSNEMLLEIFRFVQSQAQLFLDCK 76 >AE014296-775|AAF47846.1| 79|Drosophila melanogaster CG1171-PA protein. Length = 79 Score = 31.1 bits (67), Expect = 1.7 Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 6/56 (10%) Frame = -2 Query: 604 EAQLTFTPGWGQ---GKRSEAT--DYRNDGC-SSEDSVYTIYKLIKNEAEKFLACQ 455 + QLTF+P WG+ G T + + C +S + + I++ ++++A+ FL C+ Sbjct: 21 QCQLTFSPDWGKRSVGGAGPGTFFETQQGNCKTSNEMLLEIFRFVQSQAQLFLDCK 76 >Y00843-1|CAA68766.1| 410|Drosophila melanogaster protein ( Drosophila melanogasterH2.0 homeobox gene. ). Length = 410 Score = 28.7 bits (61), Expect = 9.1 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = -2 Query: 592 TFTPGWGQGKRSEATDYRNDGCSSED 515 T TP G G EA DY +D CSS D Sbjct: 369 TSTPS-GDGAPQEALDYSSDSCSSVD 393 >BT025227-1|ABF17918.1| 418|Drosophila melanogaster FI01011p protein. Length = 418 Score = 28.7 bits (61), Expect = 9.1 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = -2 Query: 592 TFTPGWGQGKRSEATDYRNDGCSSED 515 T TP G G EA DY +D CSS D Sbjct: 377 TSTPS-GDGTPQEALDYSSDSCSSVD 401 >AY119136-1|AAM50996.1| 418|Drosophila melanogaster RE37758p protein. Length = 418 Score = 28.7 bits (61), Expect = 9.1 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = -2 Query: 592 TFTPGWGQGKRSEATDYRNDGCSSED 515 T TP G G EA DY +D CSS D Sbjct: 377 TSTPS-GDGTPQEALDYSSDSCSSVD 401 >AE014134-1019|AAF52323.2| 418|Drosophila melanogaster CG11607-PA protein. Length = 418 Score = 28.7 bits (61), Expect = 9.1 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = -2 Query: 592 TFTPGWGQGKRSEATDYRNDGCSSED 515 T TP G G EA DY +D CSS D Sbjct: 377 TSTPS-GDGTPQEALDYSSDSCSSVD 401 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 28,441,392 Number of Sequences: 53049 Number of extensions: 527486 Number of successful extensions: 1162 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1162 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3458330568 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -