Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_E14
         (755 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025463-1|AAB71008.3|  871|Caenorhabditis elegans Hypothetical ...    30   1.5  
AF077544-4|ABD94098.1|  348|Caenorhabditis elegans Hypothetical ...    29   3.6  
AF077544-3|AAK39242.3|  458|Caenorhabditis elegans Hypothetical ...    29   3.6  

>AF025463-1|AAB71008.3|  871|Caenorhabditis elegans Hypothetical
           protein K10B4.3 protein.
          Length = 871

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 623 GQNQHKYQSATHCLQCLPSLVFKN 694
           G++  +YQ+  HC +CLPS + K+
Sbjct: 671 GKDSQQYQTLEHCWKCLPSSITKS 694


>AF077544-4|ABD94098.1|  348|Caenorhabditis elegans Hypothetical
           protein H22K11.4b protein.
          Length = 348

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
 Frame = +2

Query: 485 LDQFVNSINGIFRGASIVSIVGGLRSLALAPTWSKR--QLSFADQQGSGQNQHKY---QS 649
           + Q  NS+   FRG ++   + G+RS  + P   +   + SF      G  Q  Y    S
Sbjct: 40  ISQLENSLRNTFRGRNVNPYIAGVRSRYIIPRGKEHIFKNSFGTMVYVGTQQKFYPGTMS 99

Query: 650 ATHCLQCLP 676
             H LQ +P
Sbjct: 100 IVHNLQTMP 108


>AF077544-3|AAK39242.3|  458|Caenorhabditis elegans Hypothetical
           protein H22K11.4a protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
 Frame = +2

Query: 485 LDQFVNSINGIFRGASIVSIVGGLRSLALAPTWSKR--QLSFADQQGSGQNQHKY---QS 649
           + Q  NS+   FRG ++   + G+RS  + P   +   + SF      G  Q  Y    S
Sbjct: 150 ISQLENSLRNTFRGRNVNPYIAGVRSRYIIPRGKEHIFKNSFGTMVYVGTQQKFYPGTMS 209

Query: 650 ATHCLQCLP 676
             H LQ +P
Sbjct: 210 IVHNLQTMP 218


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,998,765
Number of Sequences: 27780
Number of extensions: 285590
Number of successful extensions: 668
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)