Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_E12
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    26   0.28 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   0.84 
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    23   3.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.9  

>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 9/115 (7%)
 Frame = -3

Query: 408 LLLAENVDEKIYKSAQDICLEIGTMFQIQ--DDFIDCFGDEIKTGKVGTDIQERKCTWLA 235
           +LLA + + ++    Q I  ++  +FQ Q  D+ +   GD +       ++QE K    A
Sbjct: 10  MLLANHKNVQVGDLVQKIAQKLQVLFQDQIVDEMVTVLGD-LHRKPTYNNLQEMKYLERA 68

Query: 234 VQALQRCTEAQRTV-------FKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEK 91
           ++   R   +   +       F  C G   P        +Y+  H P IY   EK
Sbjct: 69  IKESLRLYPSVHFISRKLGEDFVTCNGLKLPKSTITHLHIYDLHHNPDIYPDPEK 123


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 14/70 (20%), Positives = 28/70 (40%)
 Frame = +1

Query: 82  VHRFFLMLVYLREVKVFVKSFYAFHMCWFTATITGFEYCTLCFSTALQRLNCQPSTFALL 261
           V  F  + ++L    ++V S  +    W+    T  E CT   ST  +  +  P+     
Sbjct: 3   VGSFTFLAIWLYLTAIYVSSRKSDSGIWYWQCNTDEETCTRISSTVSRNTDTYPTLETCR 62

Query: 262 YICTNFTSFY 291
            +C  + + +
Sbjct: 63  LVCGKYGALW 72


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/38 (23%), Positives = 20/38 (52%)
 Frame = -3

Query: 399 AENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIK 286
           A+ V + +YK+ QD   ++   +  +  ++    DE+K
Sbjct: 85  AKTVIQHLYKNKQDWWKQLEAKYDPEHTYVKAHEDELK 122


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +1

Query: 52  YIFNLSYNI-VVHRFFLMLVYLREVKV-FVKSFYAFHMCWFTATI 180
           Y F  ++ I  VH  FL+ +Y   V + F+   Y F+  +   T+
Sbjct: 114 YYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTV 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,970
Number of Sequences: 336
Number of extensions: 3571
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)