Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_E11
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 291 4e-79
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 291 5e-79
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 290 8e-79
SB_56| Best HMM Match : Actin (HMM E-Value=0) 290 8e-79
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 289 1e-78
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 289 1e-78
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 257 7e-69
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 7e-22
SB_54| Best HMM Match : Actin (HMM E-Value=0) 87 1e-17
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 86 3e-17
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 68 8e-12
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.006
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 36 0.042
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 32 0.51
SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 4.8
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 29 4.8
SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 28 6.3
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 28 8.4
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 291 bits (714), Expect = 4e-79
Identities = 134/145 (92%), Positives = 141/145 (97%)
Frame = -2
Query: 699 AASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 520
A+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIR
Sbjct: 194 ASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIR 253
Query: 519 KDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLS 340
KDLYANTV+SGGTTMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLS
Sbjct: 254 KDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLS 313
Query: 339 TFQQMWISKEEYDESGPGIVHRKCF 265
TFQQMWISK+EYDESGP IVHRKCF
Sbjct: 314 TFQQMWISKQEYDESGPAIVHRKCF 338
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 291 bits (713), Expect = 5e-79
Identities = 134/145 (92%), Positives = 141/145 (97%)
Frame = -2
Query: 699 AASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 520
A+S+S+EKSYELPDGQVITIGNERFRCPEAL QPSFLGMES GIHET YNSIMKCDVDIR
Sbjct: 205 ASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIR 264
Query: 519 KDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLS 340
KDLYANTVMSGGTTMYPG+ADRMQKEI+ALAPST+KIKIIAPPERKYSVWIGGSILASLS
Sbjct: 265 KDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLS 324
Query: 339 TFQQMWISKEEYDESGPGIVHRKCF 265
TFQQMWISK+EYDESGP IVHRKCF
Sbjct: 325 TFQQMWISKQEYDESGPAIVHRKCF 349
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 290 bits (711), Expect = 8e-79
Identities = 133/145 (91%), Positives = 141/145 (97%)
Frame = -2
Query: 699 AASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 520
A+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIR
Sbjct: 232 ASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIR 291
Query: 519 KDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLS 340
KDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSILASLS
Sbjct: 292 KDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLS 351
Query: 339 TFQQMWISKEEYDESGPGIVHRKCF 265
TFQQMWISK+EYDESGP IVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 290 bits (711), Expect = 8e-79
Identities = 133/145 (91%), Positives = 141/145 (97%)
Frame = -2
Query: 699 AASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 520
A+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIR
Sbjct: 231 ASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIR 290
Query: 519 KDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLS 340
KDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSILASLS
Sbjct: 291 KDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLS 350
Query: 339 TFQQMWISKEEYDESGPGIVHRKCF 265
TFQQMWISK+EYDESGP IVHRKCF
Sbjct: 351 TFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 289 bits (710), Expect = 1e-78
Identities = 133/145 (91%), Positives = 141/145 (97%)
Frame = -2
Query: 699 AASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 520
A+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIR
Sbjct: 232 ASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIR 291
Query: 519 KDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLS 340
KDLYANTV+SGG+TMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLS
Sbjct: 292 KDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLS 351
Query: 339 TFQQMWISKEEYDESGPGIVHRKCF 265
TFQQMWISK+EYDESGP IVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 289 bits (709), Expect = 1e-78
Identities = 133/145 (91%), Positives = 141/145 (97%)
Frame = -2
Query: 699 AASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 520
AAS+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIR
Sbjct: 231 AASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIR 290
Query: 519 KDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLS 340
KDLYANTV+SGG+TM+PGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLS
Sbjct: 291 KDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLS 350
Query: 339 TFQQMWISKEEYDESGPGIVHRKCF 265
TFQQMWISK+EYDESGP IVHRKCF
Sbjct: 351 TFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 257 bits (629), Expect = 7e-69
Identities = 116/145 (80%), Positives = 132/145 (91%)
Frame = -2
Query: 699 AASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 520
A S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGME+ GIHE +YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 519 KDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLS 340
KDLY+N V+SGG+TM+PGIADRMQKEI LA +++K+K+IAPPERKYSVWIGGSILASLS
Sbjct: 65 KDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLS 124
Query: 339 TFQQMWISKEEYDESGPGIVHRKCF 265
TFQQMWI+KEEY E GP IVHRKCF
Sbjct: 125 TFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 101 bits (241), Expect = 7e-22
Identities = 59/163 (36%), Positives = 90/163 (55%), Gaps = 29/163 (17%)
Frame = -2
Query: 693 STSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 514
+T L + Y LPDG+V+ + ERF PEALFQP + +E G+ E ++N+I D+D R +
Sbjct: 237 TTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSE 296
Query: 513 LYANTVMSGGTTMYPGIADRMQKEITAL---------------------APSTI-----K 412
Y + V+SGG+TMYPG+ R+++EI L P T K
Sbjct: 297 FYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKGDTSKLSSGMGMEQIPLTADYLLQK 356
Query: 411 IKI-IAPP-ERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 292
KI I P RK+ V++GG++LA + W++++EY+E G
Sbjct: 357 FKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = -2
Query: 693 STSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 514
S E Y LPDGQ I IG+ERFR E LFQPS LG + GIHE+++ SI KCD+D+R +
Sbjct: 2278 SDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAE 2337
Query: 513 LYANTVMSG 487
L+ N V+SG
Sbjct: 2338 LFHNIVLSG 2346
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 85.8 bits (203), Expect = 3e-17
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 17/145 (11%)
Frame = -2
Query: 648 ITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 472
+ + ERF PE F P F + + + E V N I C +D+R+ LY N V+SGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 471 PGIADRMQKEIT----------------ALAPSTIKIKIIAPPERKYSVWIGGSILASLS 340
R+Q++I + P I+ ++I+ ++Y+VW GGS+LAS
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315
Query: 339 TFQQMWISKEEYDESGPGIVHRKCF 265
F + +K +YDE GP I F
Sbjct: 316 EFYSVCHTKADYDEHGPSICRHNPF 340
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 67.7 bits (158), Expect = 8e-12
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = -2
Query: 588 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 409
G + G+ + V S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P ++++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 408 KII---APPERKYSVWIGGSILASL 343
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Frame = -2
Query: 582 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST----- 418
E + + +S++ C +D RK L N V+ GGT M PG R+ +EI L S
Sbjct: 54 EEKSLATALLDSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDK 113
Query: 417 --IK-IKIIAPP-ERKYSVWIGGSILASLSTFQQMWISKEEYDE 298
IK +K+ PP + W+GG+I SL ++E Y +
Sbjct: 114 LFIKTVKMHQPPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = -2
Query: 570 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 466
I E + +I K D+D+R+ LY+N V+SGG+T++ G
Sbjct: 257 IIEVLAFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 35.5 bits (78), Expect = 0.042
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2
Query: 684 LEKSYELPDGQVITIGNERFRCPEALFQPSFL 589
L K Y LPDGQ+I+IG E E LF+P L
Sbjct: 867 LTKFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2
Query: 618 PEALFQPSFLGMESCGIHETV 556
PE +FQPS LG+E GI ET+
Sbjct: 3 PEIIFQPSMLGLEQAGITETM 23
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = -1
Query: 574 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 395
R P+DR + HH RR H +HR H R++R+ +G+ L+ +D
Sbjct: 830 RPPQDRHRRHHHRRRHHN----NKHRKHSREHSRRRHQRKHHKGNDAQETLEEIFED--D 883
Query: 394 PREEVLRMDRWIHPG 350
R+E +D +++ G
Sbjct: 884 ARDEKENVDEFVNGG 898
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -1
Query: 598 FLPGYGIVRHP-RDRVQLHHEV-RRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRA 425
F+ G G++ H + Q+ E R + G +HRH R +HH ++ R+ + + A
Sbjct: 894 FVNGGGMMEHELQSDSQISQETGARENDPGKKHKHRHRRHHHHRRQHNRKIKKHRRKHSA 953
Query: 424 LDHQ 413
H+
Sbjct: 954 RKHE 957
>SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1916
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 609 EPRDNGTSRYRW*SPDRQEVRXTSRGRWRR 698
E R NG R R+ PD +VR + WRR
Sbjct: 711 ERRHNGRDRRRYGQPDSGDVRQSRTASWRR 740
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 356 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPD 493
+DPP+ +Y L+GG ++ ++ FCI G++V PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPE 801
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = -1
Query: 571 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--R 398
HP ++ HHE R P H H P ++ E P DH++++
Sbjct: 316 HPPEQ---HHEEEERGVHPPGEHHEEEERGAHPPGQDLEEEERGAHPPGQDHEEEERGAH 372
Query: 397 SPREEVLRMDRWIHP 353
P + +R +HP
Sbjct: 373 PPEQHHEEEERGVHP 387
>SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 791
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 591 GRKAGREPRDNGTSRYRW*SPDRQEVRXTSRGRWRR 698
GR +GR+ RD G R W R R + R RW R
Sbjct: 604 GRDSGRDGRDTG--RESWRDGARDSGRDSERKRWPR 637
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 504 NTVMSGGTTMYPGIADRMQKEITALAP 424
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = -1
Query: 574 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYR--RQDAEGDHRPR--ALDHQDQ 407
RH R R + R RH RH H R++ R + R R H+
Sbjct: 23 RHERSRHETRQHERSRHKTSRHESSRHKTSRHERSRHKTSRHETSRHERSRHETRQHERS 82
Query: 406 DHRSPREEVLRMDRWIH 356
H++ R E R ++ H
Sbjct: 83 RHKTSRHETSRHEKSRH 99
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = -1
Query: 619 SRGSLPAFLPGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGD 440
+R ++P LPG H R R HH ++H ++ HH Q +
Sbjct: 930 ARPNMPGTLPGNYPESHKRHRHSHHHH------------YQHYQYNHHHDHQSHQHHDSH 977
Query: 439 HRPRALDHQ 413
H LDH+
Sbjct: 978 HHREVLDHK 986
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.3 bits (60), Expect = 6.3
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = -1
Query: 577 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP-RYRRQDAEGDHRPRALDHQDQD- 404
V HPR V +H HP V HR +H + RQDA DH + + H QD
Sbjct: 606 VVHPRRDV-VHPRQDVVHPRQDVDHHRQDVDHHRQDVDHHRQDA--DHHRQDVVHPRQDV 662
Query: 403 -HRSPREEVLRMDRWIHPGFPVHLPADVD 320
HR + R D H VH D D
Sbjct: 663 VHRRQDADHRRQDADHHRQDVVHPRQDAD 691
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = -1
Query: 568 PRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 398
PRDR + E RRR P R+ R + Y PR RR+ R R D R
Sbjct: 854 PRDRRRRSPEHRRRREASPPRRDR--KRYDSPPRRRRRSPSPPPRRRRRDSYSPSRR 908
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 507 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 388
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/73 (24%), Positives = 27/73 (36%)
Frame = -1
Query: 574 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 395
RH R R + R RH RH H R++ E R+ H+ + H
Sbjct: 63 RHERSRHETRQHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERS-RHETRQHER 121
Query: 394 PREEVLRMDRWIH 356
R + R ++ H
Sbjct: 122 SRHKTSRHEKSRH 134
>SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = -1
Query: 547 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--RSPREEVLR 374
HHE R P + H H P ++ E P H++++ P E
Sbjct: 154 HHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPEEHHEE 213
Query: 373 MDRWIHP 353
+R +HP
Sbjct: 214 EERGVHP 220
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = -1
Query: 577 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 398
++HP ++ H + ++ P + HHVP + +A G+ R Q+ D+
Sbjct: 550 IQHPVEKAIQHAQEKKYQP----ELEKKTIKSHHVPGQDKTEARGEERIAVWSTQNGDYY 605
Query: 397 SPREE 383
R+E
Sbjct: 606 DQRDE 610
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,560,522
Number of Sequences: 59808
Number of extensions: 435817
Number of successful extensions: 1488
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1466
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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