Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_E11
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 271 3e-73
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 271 3e-73
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 271 3e-73
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 269 1e-72
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 269 1e-72
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 268 2e-72
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 262 1e-70
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 262 1e-70
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 246 8e-66
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 237 4e-63
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 227 5e-60
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 204 4e-53
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 140 8e-34
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 125 2e-29
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 119 2e-27
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 102 3e-22
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 75 5e-14
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 72 4e-13
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 70 2e-12
At5g43500.2 68418.m05318 expressed protein 46 3e-05
At5g43500.1 68418.m05319 expressed protein 46 3e-05
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 34 0.079
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 29 2.2
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 28 6.8
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 28 6.8
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 9.0
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 9.0
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 27 9.0
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 27 9.0
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 271 bits (664), Expect = 3e-73
Identities = 122/143 (85%), Positives = 134/143 (93%)
Frame = -2
Query: 693 STSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 514
S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKD
Sbjct: 235 SSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKD 294
Query: 513 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTF 334
LY N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 333 QQMWISKEEYDESGPGIVHRKCF 265
QQMWISK EYDE+GPGIVHRKCF
Sbjct: 355 QQMWISKAEYDEAGPGIVHRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 271 bits (664), Expect = 3e-73
Identities = 122/143 (85%), Positives = 133/143 (93%)
Frame = -2
Query: 693 STSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 514
S+S+EKSYELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKD
Sbjct: 235 SSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKD 294
Query: 513 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTF 334
LY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 333 QQMWISKEEYDESGPGIVHRKCF 265
QQMWI+K EYDESGP IVHRKCF
Sbjct: 355 QQMWIAKAEYDESGPSIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 271 bits (664), Expect = 3e-73
Identities = 122/143 (85%), Positives = 134/143 (93%)
Frame = -2
Query: 693 STSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 514
S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKD
Sbjct: 235 SSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKD 294
Query: 513 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTF 334
LY N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 333 QQMWISKEEYDESGPGIVHRKCF 265
QQMWISK EYDE+GPGIVHRKCF
Sbjct: 355 QQMWISKAEYDEAGPGIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 269 bits (660), Expect = 1e-72
Identities = 120/143 (83%), Positives = 134/143 (93%)
Frame = -2
Query: 693 STSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 514
S+S+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME+ GIHET YNSIMKCDVDIRKD
Sbjct: 235 SSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKD 294
Query: 513 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTF 334
LY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 333 QQMWISKEEYDESGPGIVHRKCF 265
QQMWI+K EYDESGP IVHRKCF
Sbjct: 355 QQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 269 bits (660), Expect = 1e-72
Identities = 120/143 (83%), Positives = 134/143 (93%)
Frame = -2
Query: 693 STSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 514
S+S+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME+ GIHET YNSIMKCDVDIRKD
Sbjct: 235 SSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKD 294
Query: 513 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTF 334
LY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 333 QQMWISKEEYDESGPGIVHRKCF 265
QQMWI+K EYDESGP IVHRKCF
Sbjct: 355 QQMWIAKAEYDESGPSIVHRKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 268 bits (658), Expect = 2e-72
Identities = 121/144 (84%), Positives = 134/144 (93%)
Frame = -2
Query: 696 ASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 517
+S+S+EK+YELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRK
Sbjct: 234 SSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRK 293
Query: 516 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 337
DLY N V+SGG+TM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLST
Sbjct: 294 DLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 353
Query: 336 FQQMWISKEEYDESGPGIVHRKCF 265
FQQMWISK EYDESGP IVHRKCF
Sbjct: 354 FQQMWISKSEYDESGPSIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 262 bits (643), Expect = 1e-70
Identities = 119/143 (83%), Positives = 131/143 (91%)
Frame = -2
Query: 693 STSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 514
S+S+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKD
Sbjct: 235 SSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKD 294
Query: 513 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTF 334
LY N V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 333 QQMWISKEEYDESGPGIVHRKCF 265
QQMWI+K EYDESGP IVHRKCF
Sbjct: 355 QQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 262 bits (643), Expect = 1e-70
Identities = 119/143 (83%), Positives = 131/143 (91%)
Frame = -2
Query: 693 STSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 514
S+S+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKD
Sbjct: 235 SSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKD 294
Query: 513 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTF 334
LY N V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 333 QQMWISKEEYDESGPGIVHRKCF 265
QQMWI+K EYDESGP IVHRKCF
Sbjct: 355 QQMWIAKAEYDESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 246 bits (603), Expect = 8e-66
Identities = 109/143 (76%), Positives = 126/143 (88%)
Frame = -2
Query: 693 STSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 514
S++++++YELPDGQVITIG ERFRCPE LFQ S +GME+ GIHET YNSIMKCDVDIRKD
Sbjct: 236 SSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKD 295
Query: 513 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTF 334
LY N V+SGGTTM+PGIADRM KEI ALAP ++KIK++APPERKYSVW+GGSILASLS+F
Sbjct: 296 LYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSF 355
Query: 333 QQMWISKEEYDESGPGIVHRKCF 265
MWI+K EYDE G IVHRKCF
Sbjct: 356 APMWITKAEYDEQGGAIVHRKCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 237 bits (581), Expect = 4e-63
Identities = 105/143 (73%), Positives = 125/143 (87%)
Frame = -2
Query: 693 STSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 514
S++++++YELPDGQVITIG ERFRCPE LFQPS +GME+ GIHE YNSIMKCD DIRKD
Sbjct: 187 SSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKD 246
Query: 513 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTF 334
LY N V+SGGTTM+ GI +RM KEI ALA + ++IKI+APPERKYSVWIGGSILASLST+
Sbjct: 247 LYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTY 306
Query: 333 QQMWISKEEYDESGPGIVHRKCF 265
+QMWI+K EY+E+GP IVH KCF
Sbjct: 307 EQMWITKAEYEENGPAIVHTKCF 329
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 227 bits (555), Expect = 5e-60
Identities = 104/127 (81%), Positives = 117/127 (92%)
Frame = -2
Query: 693 STSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 514
S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKD
Sbjct: 235 SSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKD 294
Query: 513 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTF 334
LY N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 333 QQMWISK 313
QQ+ I +
Sbjct: 355 QQVKIDQ 361
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 204 bits (498), Expect = 4e-53
Identities = 90/140 (64%), Positives = 111/140 (79%)
Frame = -2
Query: 687 SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLY 508
+++K+Y LPDGQ ITI ERF CPE LFQPS +G ES GIHE NSI+KC VD R+D+Y
Sbjct: 226 TIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRDMY 285
Query: 507 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQ 328
N +M+GGTTM GI +RM KE+ AL PS++K+K++ PPE + SVWIGGSILASLSTF Q
Sbjct: 286 GNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQ 345
Query: 327 MWISKEEYDESGPGIVHRKC 268
MWI+K+EY+E G IVHRKC
Sbjct: 346 MWITKDEYEEHGAAIVHRKC 365
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 140 bits (339), Expect = 8e-34
Identities = 68/151 (45%), Positives = 100/151 (66%), Gaps = 15/151 (9%)
Frame = -2
Query: 675 SYELPDGQVITIGNERFRCPEALFQPSFL----GMESC--------GIHETVYNSIMKCD 532
SYELPDGQ + IG +RF+ P+ +F PS + GME G+ V SI KCD
Sbjct: 290 SYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCD 349
Query: 531 VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP---PERKYSVWIGG 361
VDIR++LY++ +++GGT+ + +R++K++ +P + ++K++A ER++SVWIGG
Sbjct: 350 VDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGG 409
Query: 360 SILASLSTFQQMWISKEEYDESGPGIVHRKC 268
SILASL +FQQMW SK EY+E G + RKC
Sbjct: 410 SILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 125 bits (302), Expect = 2e-29
Identities = 65/144 (45%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Frame = -2
Query: 678 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 499
+ + LPDGQVI+IG ER+ EALFQPS LG+E GI E + I + + L NT
Sbjct: 221 EQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENT 280
Query: 498 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE------RKYSVWIGGSILASLST 337
V+ GGTT G R QKE L S I+ ++ PPE YS W+GG+ILA +
Sbjct: 281 VLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVF 339
Query: 336 FQQMWISKEEYDESGPGIVHRKCF 265
Q ++K +YDE+GP +VHRKCF
Sbjct: 340 PQNQHVTKADYDETGPSVVHRKCF 363
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 119 bits (286), Expect = 2e-27
Identities = 60/146 (41%), Positives = 93/146 (63%), Gaps = 12/146 (8%)
Frame = -2
Query: 693 STSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 514
+T L K+Y LPDG+VI +G ERF+ PEALF P + +E G+ + V+ I + D+D R
Sbjct: 234 TTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMM 293
Query: 513 LYANTVMSGGTTMYPGIADRMQKEI------TALAPS-----TIKIKIIAPPERKYSVWI 367
LY + V+SGG+TMYPG+ R++KEI T L + ++++I PP RK+ V++
Sbjct: 294 LYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYL 353
Query: 366 GGSILAS-LSTFQQMWISKEEYDESG 292
GG++LA + + WI++E+Y E G
Sbjct: 354 GGAVLAGIMKDAPEFWINREDYMEEG 379
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 102 bits (244), Expect = 3e-22
Identities = 47/128 (36%), Positives = 74/128 (57%)
Frame = -2
Query: 648 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 469
I + NERF PE LFQP+ LGM G+ E + +I C ++ LY + +++GG+T++P
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFP 352
Query: 468 GIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGP 289
+ +R++ E+ L P +KI + VW GGS+LAS F+ M ++K EY+E G
Sbjct: 353 QLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGS 412
Query: 288 GIVHRKCF 265
R+ F
Sbjct: 413 ARCRRRFF 420
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 74.9 bits (176), Expect = 5e-14
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Frame = -2
Query: 648 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKC---DVDIRKDLYANTVMSGGTT 478
I IG ERFRCPE LF P+ +G++ G+ E SI + + ++ + L ++ +M+GG +
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCS 648
Query: 477 MYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 298
+ PG+ +R++ I + P I ++ + W G S A+ F +K +YDE
Sbjct: 649 LLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAFTKMDYDE 708
Query: 297 SG 292
G
Sbjct: 709 KG 710
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 71.7 bits (168), Expect = 4e-13
Identities = 40/136 (29%), Positives = 73/136 (53%), Gaps = 6/136 (4%)
Frame = -2
Query: 693 STSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCD-VDIRK 517
S + S E+ T+ ERF+ E LFQP GM + +H+ V + CD +
Sbjct: 328 SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCDAAGLTG 387
Query: 516 D--LYANTVMSGGTTMYPGIADRMQKEITALAPSTIK--IKIIAPPERKYSVWIGGSILA 349
D + V++GG+ PG+++R+++E+ PS+I I++I PP + W G +++
Sbjct: 388 DDSWFKTVVLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLIS 447
Query: 348 SLSTFQQMW-ISKEEY 304
+LS F W I+++++
Sbjct: 448 NLSIFPGPWCITRKQF 463
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 69.7 bits (163), Expect = 2e-12
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 17/137 (12%)
Frame = -2
Query: 642 IGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 466
+G ERF PE F P + + + + I +D R+ LY N V+SGG+TM+
Sbjct: 280 VGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKD 339
Query: 465 IADRMQKEITALAPS----------------TIKIKIIAPPERKYSVWIGGSILASLSTF 334
R+Q+++ + + +++ +++ P ++++VW GGS+L+S F
Sbjct: 340 FGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAVWFGGSVLSSTPEF 399
Query: 333 QQMWISKEEYDESGPGI 283
+KEEY+E G I
Sbjct: 400 FASCRTKEEYEEYGASI 416
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = -2
Query: 582 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 406
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 405 II----APPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 292
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 518 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = -2
Query: 582 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 406
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 405 II----APPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 292
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 530 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 571
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 34.3 bits (75), Expect = 0.079
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = -2
Query: 570 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 391
I E +Y I++ + KD Y N+ G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 390 ERKYS 376
+RK++
Sbjct: 393 DRKHA 397
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = -2
Query: 570 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 391
I E +Y I++ + KD + + G +YP ++++ T L ++ + + P
Sbjct: 336 IRELIYREILEYHPQLLKDYMSGS--EGSNFVYPSAIGHLRQQFTYLEENSSRNGPVIPL 393
Query: 390 ERKYS 376
ERK++
Sbjct: 394 ERKHA 398
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -2
Query: 693 STSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 553
S + S E+ T+ ERF+ E LFQP G+ +H+ VY
Sbjct: 328 SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGII---VHKLVY 371
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +2
Query: 455 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 610
L+ + G+++ D+ +A YR L M Y+V W + + WKR
Sbjct: 571 LTEVEGFLLSADDLKFVATQYRRLHSKQLRHMFRFYSVQWQTWAACFIQAAWKR 624
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -1
Query: 574 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 401
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -1
Query: 574 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 401
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 533 SHFMMELYTVSWMPHDSIPRKEGWKRASGQRNLSLPMVIT*PSGS 667
S F MEL +S H ++ R G+ SG+R L P + P+GS
Sbjct: 343 SQFRMELEMISLAVHKNLLRLIGYCATSGERLLVYPYM---PNGS 384
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 454 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 341
D E +P+AL H S ++ LR W+ P FP+
Sbjct: 423 DNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,118,776
Number of Sequences: 28952
Number of extensions: 290092
Number of successful extensions: 973
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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