Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_E08
         (604 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY528716-1|AAT44401.1|  376|Homo sapiens antigen MU-RMS-40.17 pr...    31   3.1  
AL136233-2|CAI17235.1|  232|Homo sapiens RUN and FYVE domain con...    31   3.1  
AK000925-1|BAA91429.1|  232|Homo sapiens protein ( Homo sapiens ...    31   3.1  
AF461266-1|AAL67520.1|  606|Homo sapiens RUFY2 protein.                31   3.1  
AF411980-1|AAL04164.1|  590|Homo sapiens Run- and FYVE-domain co...    31   3.1  
AB040970-1|BAA96061.1|  619|Homo sapiens KIAA1537 protein protein.     31   3.1  

>AY528716-1|AAT44401.1|  376|Homo sapiens antigen MU-RMS-40.17
           protein.
          Length = 376

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 397 LARSRSRL*IVLTIVKLVSKVKCLIIHHDVRVEFLEY 507
           L R+R+ L + L   K+   ++CLII  D+  EF EY
Sbjct: 102 LGRARAWLRLALMQKKMADYLRCLIIQRDLLSEFYEY 138


>AL136233-2|CAI17235.1|  232|Homo sapiens RUN and FYVE domain
           containing 2 protein.
          Length = 232

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 397 LARSRSRL*IVLTIVKLVSKVKCLIIHHDVRVEFLEY 507
           L R+R+ L + L   K+   ++CLII  D+  EF EY
Sbjct: 102 LGRARAWLRLALMQKKMADYLRCLIIQRDLLSEFYEY 138


>AK000925-1|BAA91429.1|  232|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10063 fis, clone HEMBA1001446. ).
          Length = 232

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 397 LARSRSRL*IVLTIVKLVSKVKCLIIHHDVRVEFLEY 507
           L R+R+ L + L   K+   ++CLII  D+  EF EY
Sbjct: 102 LGRARAWLRLALMQKKMADYLRCLIIQRDLLSEFYEY 138


>AF461266-1|AAL67520.1|  606|Homo sapiens RUFY2 protein.
          Length = 606

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 397 LARSRSRL*IVLTIVKLVSKVKCLIIHHDVRVEFLEY 507
           L R+R+ L + L   K+   ++CLII  D+  EF EY
Sbjct: 102 LGRARAWLRLALMQKKMADYLRCLIIQRDLLSEFYEY 138


>AF411980-1|AAL04164.1|  590|Homo sapiens Run- and FYVE-domain
           containing protein Rabip4R protein.
          Length = 590

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 397 LARSRSRL*IVLTIVKLVSKVKCLIIHHDVRVEFLEY 507
           L R+R+ L + L   K+   ++CLII  D+  EF EY
Sbjct: 86  LGRARAWLRLALMQKKMADYLRCLIIQRDLLSEFYEY 122


>AB040970-1|BAA96061.1|  619|Homo sapiens KIAA1537 protein protein.
          Length = 619

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 397 LARSRSRL*IVLTIVKLVSKVKCLIIHHDVRVEFLEY 507
           L R+R+ L + L   K+   ++CLII  D+  EF EY
Sbjct: 115 LGRARAWLRLALMQKKMADYLRCLIIQRDLLSEFYEY 151


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,048,071
Number of Sequences: 237096
Number of extensions: 1258157
Number of successful extensions: 2488
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2488
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)