Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_E04
         (765 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83129-8|CAB76728.1|  332|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z68216-1|CAA92459.1|  493|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z83109-1|CAB05513.1|  339|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>Z83129-8|CAB76728.1|  332|Caenorhabditis elegans Hypothetical
           protein W06G6.13 protein.
          Length = 332

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 557 VFYLVINKSLALNPSSVNYL*KYYFGYLTTLFRYLVHF 670
           VF ++I   L     S + L  Y FGYL  +F  ++HF
Sbjct: 112 VFLVLIRLILIKMSGSTHRLSSYIFGYLVLIFLLIIHF 149


>Z68216-1|CAA92459.1|  493|Caenorhabditis elegans Hypothetical
           protein F27C8.1 protein.
          Length = 493

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 189 FPSMKPNNMYTETI-ILIMLLMTSYRRIGSQIAVAVNRWFS 70
           FP   P ++  E + IL+++LMT+   I  ++A  V  WF+
Sbjct: 143 FPDCAPPDVVAELLAILLIVLMTAINCISVRLATIVQDWFT 183


>Z83109-1|CAB05513.1|  339|Caenorhabditis elegans Hypothetical
           protein F44G3.1 protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 404 SFSLITILYTCCYMWS 451
           SFS++ I+Y+CC  WS
Sbjct: 49  SFSVLGIIYSCCDFWS 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,703,004
Number of Sequences: 27780
Number of extensions: 275133
Number of successful extensions: 392
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)