Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_E03
(342 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7T0I5 Cluster: Predicted protein; n=1; Nematostella ve... 33 1.2
UniRef50_UPI0000DC0080 Cluster: UPI0000DC0080 related cluster; n... 32 2.9
UniRef50_Q01F11 Cluster: COG3321: Polyketide synthase modules an... 31 5.0
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 31 5.0
UniRef50_Q23FX7 Cluster: Double-stranded RNA binding motif famil... 31 5.0
UniRef50_UPI0000F34AE7 Cluster: UPI0000F34AE7 related cluster; n... 31 6.7
UniRef50_Q4RIU2 Cluster: Chromosome undetermined SCAF15041, whol... 31 6.7
UniRef50_Q5LH99 Cluster: Possible O-antigen related transmembran... 31 6.7
UniRef50_A0CFL1 Cluster: Chromosome undetermined scaffold_176, w... 31 6.7
UniRef50_Q8N962 Cluster: CDNA FLJ38312 fis, clone FCBBF3021506; ... 31 6.7
UniRef50_UPI0000DA451B Cluster: PREDICTED: hypothetical protein;... 30 8.8
UniRef50_Q38FR3 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
>UniRef50_A7T0I5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 242
Score = 33.1 bits (72), Expect = 1.2
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = -2
Query: 164 CIYFTCCVLCIFRLLTSWLFCLHL-----LGPIHLLRSLIDNQKAILNA 33
C+Y C C+F WL C+ L G + L+ S+ + Q+ LNA
Sbjct: 147 CVYLPCIAFCLFLFRKIWLLCISLGLNGVGGSLILIPSVPEMQRCCLNA 195
>UniRef50_UPI0000DC0080 Cluster: UPI0000DC0080 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0080 UniRef100 entry -
Rattus norvegicus
Length = 294
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = -2
Query: 278 VHFNQHVQISA---VRCYSCVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWL 108
VH ++ + R CVC ++ + V C+H C C+ CV C++ + W+
Sbjct: 108 VHLQNYIYLLCFVYARLCVCVCVCVSYHLEVTLCIHLGVCMCVCVCVCV-CVYVCVCMWV 166
>UniRef50_Q01F11 Cluster: COG3321: Polyketide synthase modules and
related proteins; n=3; cellular organisms|Rep: COG3321:
Polyketide synthase modules and related proteins -
Ostreococcus tauri
Length = 11541
Score = 31.1 bits (67), Expect = 5.0
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -2
Query: 194 PSCLHRPSCRCIYFTCCVLCIFRLLTSWLFCLHLLGPIHLLRSLIDNQKAIL--NAIEFR 21
P+C R C I++ C +LT+++ + IH+LR L DNQ + NA +
Sbjct: 1800 PACPPRKVCFSIFYVKYSECTAGILTNFVRKPTSISRIHILRRLRDNQNKQIHPNAFKSP 1859
Query: 20 LC 15
+C
Sbjct: 1860 IC 1861
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 31.1 bits (67), Expect = 5.0
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 82 MGPSRCRQNSQEVSRRNM-QSTQQVKYMQRQLGRCR 186
MG R ++ SQ V++ QS QVK+ +R+LG C+
Sbjct: 1 MGKRRQKRKSQSVAKTTAYQSRYQVKFARRRLGACK 36
>UniRef50_Q23FX7 Cluster: Double-stranded RNA binding motif family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Double-stranded RNA binding motif family protein -
Tetrahymena thermophila SB210
Length = 755
Score = 31.1 bits (67), Expect = 5.0
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 200 IHQRLCGSKRKNSSEQQKFEHVD*SGLVRPSIILKMPMHNHR 325
+HQ+ K K+SS +QK + D S ++ L P+HN+R
Sbjct: 303 VHQKFKNEKAKSSSSEQKSKSKDISEEEERALELYDPLHNYR 344
>UniRef50_UPI0000F34AE7 Cluster: UPI0000F34AE7 related cluster; n=1;
Bos taurus|Rep: UPI0000F34AE7 UniRef100 entry - Bos
Taurus
Length = 500
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 320 DCASAF*E*YLVVRVHFNQHVQISAVR-CYSCVCCRKAF 207
DC+ AF + HFNQH QI R Y C C KAF
Sbjct: 452 DCSKAF-----NCKSHFNQHEQIHPTRKPYKCTECGKAF 485
>UniRef50_Q4RIU2 Cluster: Chromosome undetermined SCAF15041, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF15041, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 275
Score = 30.7 bits (66), Expect = 6.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 179 RPSCRCIYFTCCVLCIFRLLTSWLFCL 99
RP+C C C +F L SW FCL
Sbjct: 178 RPACTCSCLRWCSSLLFPLQGSWCFCL 204
>UniRef50_Q5LH99 Cluster: Possible O-antigen related transmembrane
protein; n=1; Bacteroides fragilis NCTC 9343|Rep:
Possible O-antigen related transmembrane protein -
Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)
Length = 366
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -2
Query: 167 RCIYFTCCVLCIFRLLTSWLFCLHLLGPIHLLRSLIDNQKAILNAIEF 24
+CIY + ++ W+ + +L PI LL L+DN + +I F
Sbjct: 82 KCIYLYTLIRLFRQITPLWISSISILLPISLLFMLVDNPLRFMTSIIF 129
>UniRef50_A0CFL1 Cluster: Chromosome undetermined scaffold_176,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_176,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 956
Score = 30.7 bits (66), Expect = 6.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -2
Query: 320 DCASAF*E*YLVVRVHFNQHVQISAVRCYSC 228
DC++AF + Y++ +H+N +V + V Y C
Sbjct: 250 DCSAAFGDHYMIELIHYNDNVGMIFVDLYEC 280
>UniRef50_Q8N962 Cluster: CDNA FLJ38312 fis, clone FCBBF3021506;
n=2; Homo sapiens|Rep: CDNA FLJ38312 fis, clone
FCBBF3021506 - Homo sapiens (Human)
Length = 134
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -2
Query: 230 CVC-CRKAFGV*VPSCLHRPSCRCIYFTCCV-LCIFRLLTSWLFCLHL 93
CVC CR V + C+ P C C+Y V +C+ + C H+
Sbjct: 7 CVCMCRWCLCVCIYMCVCVPVCMCVYVCVYVRICVICVCVCVFVCAHM 54
>UniRef50_UPI0000DA451B Cluster: PREDICTED: hypothetical protein;
n=2; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 788
Score = 30.3 bits (65), Expect = 8.8
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +2
Query: 53 GCQSANEVSVWGRVGV-GRIAKR*VGGICRV---RNR*SICSGNWGGVG 187
G +SA WGRVG+ R R G RV R + +G+WGGVG
Sbjct: 323 GGRSARPTGSWGRVGIERRTGARPTGSWGRVGIERRTGARPTGSWGGVG 371
>UniRef50_Q38FR3 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 118
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -2
Query: 191 SCLHRPSCRCIY---FTCCVLCIFRLLTSWLFCLHLLGPIHLLRSLI 60
S LH + RC+ F CV +F +T WLF L +L + LL +++
Sbjct: 43 SSLHPTAHRCVKLFKFILCVTHVFHNVTVWLFSLLVLVQVVLLFTIL 89
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 254,576,358
Number of Sequences: 1657284
Number of extensions: 4016744
Number of successful extensions: 12110
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 11688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12093
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10275329640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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