Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_E03
(342 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK095631-1|BAC04594.1| 134|Homo sapiens protein ( Homo sapiens ... 31 1.2
AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens ... 29 2.9
BC117184-1|AAI17185.1| 1388|Homo sapiens retrotransposon gag dom... 29 5.0
BC113670-1|AAI13671.1| 1388|Homo sapiens retrotransposon gag dom... 29 5.0
AY121804-1|AAM82752.1| 1388|Homo sapiens BJ-HCC-23 tumor antigen... 29 5.0
AB037739-1|BAA92556.1| 1418|Homo sapiens KIAA1318 protein protein. 29 5.0
BC125189-1|AAI25190.1| 752|Homo sapiens zinc finger protein 425... 28 8.7
BC064515-1|AAH64515.1| 379|Homo sapiens raptor protein protein. 28 8.7
BC030261-1|AAH30261.1| 397|Homo sapiens ZNF222 protein protein. 28 8.7
AY621067-1|AAT40438.1| 752|Homo sapiens zinc finger protein 425... 28 8.7
AY090663-1|AAM09075.1| 1335|Homo sapiens raptor protein. 28 8.7
AF187988-1|AAF04104.1| 451|Homo sapiens zinc finger protein ZNF... 28 8.7
AC067968-2|AAF66075.1| 451|Homo sapiens Zinc finger protein 222... 28 8.7
AB082951-1|BAC06490.1| 1335|Homo sapiens p150 target of rapamyci... 28 8.7
>AK095631-1|BAC04594.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ38312 fis, clone FCBBF3021506. ).
Length = 134
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -2
Query: 230 CVC-CRKAFGV*VPSCLHRPSCRCIYFTCCV-LCIFRLLTSWLFCLHL 93
CVC CR V + C+ P C C+Y V +C+ + C H+
Sbjct: 7 CVCMCRWCLCVCIYMCVCVPVCMCVYVCVYVRICVICVCVCVFVCAHM 54
>AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ45585 fis, clone BRTHA3013882. ).
Length = 201
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -2
Query: 230 CVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLFCLHL 93
CVC V + CLH C C F C LC+ L + CLHL
Sbjct: 70 CVCLCVCVSVCLCVCLHLCVCVC-GFVCLCLCVCVCLCVCV-CLHL 113
>BC117184-1|AAI17185.1| 1388|Homo sapiens retrotransposon gag domain
containing 1 protein.
Length = 1388
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 88 PSRCRQNSQEVSRRNMQSTQQVKYMQRQLGRCRQLGTH 201
P+ C++N++E + S QQ + Q RC L H
Sbjct: 1326 PTACKRNNEEAMGNELSSQQQTEEHQHVSKRCYYLKEH 1363
>BC113670-1|AAI13671.1| 1388|Homo sapiens retrotransposon gag domain
containing 1 protein.
Length = 1388
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 88 PSRCRQNSQEVSRRNMQSTQQVKYMQRQLGRCRQLGTH 201
P+ C++N++E + S QQ + Q RC L H
Sbjct: 1326 PTACKRNNEEAMGNELSSQQQTEEHQHVSKRCYYLKEH 1363
>AY121804-1|AAM82752.1| 1388|Homo sapiens BJ-HCC-23 tumor antigen
protein.
Length = 1388
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 88 PSRCRQNSQEVSRRNMQSTQQVKYMQRQLGRCRQLGTH 201
P+ C++N++E + S QQ + Q RC L H
Sbjct: 1326 PTACKRNNEEAMGNELSSQQQTEEHQHVSKRCYYLKEH 1363
>AB037739-1|BAA92556.1| 1418|Homo sapiens KIAA1318 protein protein.
Length = 1418
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 88 PSRCRQNSQEVSRRNMQSTQQVKYMQRQLGRCRQLGTH 201
P+ C++N++E + S QQ + Q RC L H
Sbjct: 1356 PTACKRNNEEAMGNELSSQQQTEEHQHVSKRCYYLKEH 1393
>BC125189-1|AAI25190.1| 752|Homo sapiens zinc finger protein 425
protein.
Length = 752
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 242 RCYSCVCCRKAFGV 201
RCYSC CRK F V
Sbjct: 188 RCYSCYVCRKVFQV 201
>BC064515-1|AAH64515.1| 379|Homo sapiens raptor protein protein.
Length = 379
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +2
Query: 206 QRLCGSKRKNSSEQQKFEHVD*SGLVRPSIILKMPMHNHRPAEFI 340
++LC S R+N+ E++ H + G+ RP++ ++ + N ++I
Sbjct: 131 KKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYI 175
>BC030261-1|AAH30261.1| 397|Homo sapiens ZNF222 protein protein.
Length = 397
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 323 DDCASAF*E*YLVVRVHFNQHVQISAVRCYSCVCCRKAF 207
D+C +F + +H +Q V + V+CY C C K F
Sbjct: 94 DECGKSF---CYISALHIHQRVHMG-VKCYKCDVCGKEF 128
>AY621067-1|AAT40438.1| 752|Homo sapiens zinc finger protein 425
protein.
Length = 752
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 242 RCYSCVCCRKAFGV 201
RCYSC CRK F V
Sbjct: 188 RCYSCYVCRKVFQV 201
>AY090663-1|AAM09075.1| 1335|Homo sapiens raptor protein.
Length = 1335
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +2
Query: 206 QRLCGSKRKNSSEQQKFEHVD*SGLVRPSIILKMPMHNHRPAEFI 340
++LC S R+N+ E++ H + G+ RP++ ++ + N ++I
Sbjct: 131 KKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYI 175
>AF187988-1|AAF04104.1| 451|Homo sapiens zinc finger protein ZNF222
protein.
Length = 451
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 323 DDCASAF*E*YLVVRVHFNQHVQISAVRCYSCVCCRKAF 207
D+C +F + +H +Q V + V+CY C C K F
Sbjct: 148 DECGKSF---CYISALHIHQRVHMG-VKCYKCDVCGKEF 182
>AC067968-2|AAF66075.1| 451|Homo sapiens Zinc finger protein 222
protein.
Length = 451
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 323 DDCASAF*E*YLVVRVHFNQHVQISAVRCYSCVCCRKAF 207
D+C +F + +H +Q V + V+CY C C K F
Sbjct: 148 DECGKSF---CYISALHIHQRVHMG-VKCYKCDVCGKEF 182
>AB082951-1|BAC06490.1| 1335|Homo sapiens p150 target of rapamycin
(TOR)-scaffold protein containing WD-repeats protein.
Length = 1335
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +2
Query: 206 QRLCGSKRKNSSEQQKFEHVD*SGLVRPSIILKMPMHNHRPAEFI 340
++LC S R+N+ E++ H + G+ RP++ ++ + N ++I
Sbjct: 131 KKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYI 175
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,634,129
Number of Sequences: 237096
Number of extensions: 664578
Number of successful extensions: 2120
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2119
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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