Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_E02
(324 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g32800.1 68415.m04015 protein kinase family protein contains ... 29 0.94
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 28 1.6
At5g13500.3 68418.m01559 expressed protein predicted protein At2... 27 2.9
At5g13500.2 68418.m01558 expressed protein predicted protein At2... 27 2.9
At5g13500.1 68418.m01557 expressed protein predicted protein At2... 27 2.9
At5g62470.1 68418.m07839 myb family transcription factor (MYB96)... 27 3.8
At4g31250.1 68417.m04436 leucine-rich repeat transmembrane prote... 27 3.8
At3g54740.1 68416.m06056 expressed protein contains Pfam profile... 27 3.8
At3g45130.1 68416.m04871 cycloartenol synthase, putative / 2,3-e... 27 3.8
At2g07050.1 68415.m00806 cycloartenol synthase (CAS1) / 2,3-epox... 27 3.8
At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar ... 26 5.0
At5g64090.1 68418.m08049 expressed protein 26 6.7
At5g15420.1 68418.m01805 expressed protein 26 6.7
At5g14780.1 68418.m01734 formate dehydrogenase (FDH) identical t... 26 6.7
At1g70130.1 68414.m08070 lectin protein kinase, putative similar... 26 6.7
At2g25480.1 68415.m03051 expressed protein 25 8.8
At2g03800.1 68415.m00339 expressed protein 25 8.8
At1g64300.1 68414.m07287 protein kinase family protein contains ... 25 8.8
>At2g32800.1 68415.m04015 protein kinase family protein contains
dual protein kinase domains, Pfam:PF00069
Length = 851
Score = 28.7 bits (61), Expect = 0.94
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = -3
Query: 229 CWLSSPARRPTRMWCLCR-----TLQLPATPFPTCHPYLYLPSTALHSPAST 89
C L++P RP W + + LPA P HP LY+P ++L S +++
Sbjct: 398 CSLNNPTHRPNMKWVIGALSGEFSGNLPALPSFKSHP-LYIPLSSLKSTSTS 448
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 152 LSYVSSLSVPTVYSSAFTGFYPQS 81
+ ++ SL V T++S+ FTG +PQS
Sbjct: 332 IGFLESLEVLTLHSNNFTGEFPQS 355
>At5g13500.3 68418.m01559 expressed protein predicted protein
At2g25260 - Arabidopsis thaliana, EMBL:AC007070
Length = 358
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -2
Query: 194 YVVPLPYAATAGYPLSYVSSLSVPTVYSSAFTGFYP 87
+V PLP A G+P ++ P Y + +YP
Sbjct: 164 FVNPLPNLAVGGFPAAFPFFYITPEKYENIVRKYYP 199
>At5g13500.2 68418.m01558 expressed protein predicted protein
At2g25260 - Arabidopsis thaliana, EMBL:AC007070
Length = 358
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -2
Query: 194 YVVPLPYAATAGYPLSYVSSLSVPTVYSSAFTGFYP 87
+V PLP A G+P ++ P Y + +YP
Sbjct: 164 FVNPLPNLAVGGFPAAFPFFYITPEKYENIVRKYYP 199
>At5g13500.1 68418.m01557 expressed protein predicted protein
At2g25260 - Arabidopsis thaliana, EMBL:AC007070
Length = 358
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -2
Query: 194 YVVPLPYAATAGYPLSYVSSLSVPTVYSSAFTGFYP 87
+V PLP A G+P ++ P Y + +YP
Sbjct: 164 FVNPLPNLAVGGFPAAFPFFYITPEKYENIVRKYYP 199
>At5g62470.1 68418.m07839 myb family transcription factor (MYB96)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 351
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 141 HVGKGVAGSCSVRQRHHIRVGRRAGEESQHCDQKRLKHFDNL 266
H G + SC +R +++R G + G ++H ++K + H L
Sbjct: 43 HTGLRCSKSCRLRWTNYLRPGIKRGNFTEH-EEKTIVHLQAL 83
>At4g31250.1 68417.m04436 leucine-rich repeat transmembrane protein
kinase, putative receptor kinase, Petunia inflata,
Patchx:G498278
Length = 676
Score = 26.6 bits (56), Expect = 3.8
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1
Query: 207 GGRPVCGASAVRCNCRLPPFLRVILI 130
G + +CGA + C PPF V L+
Sbjct: 224 GNKGLCGAPLLPCRYTRPPFFTVFLL 249
>At3g54740.1 68416.m06056 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 390
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = -2
Query: 86 QSADANDESLRK*NVKVKTDSXELLLLR 3
Q+ +A+ ESLR+ V ++TD +L+LL+
Sbjct: 279 QALEADRESLRQIIVSMRTDKAQLVLLK 306
>At3g45130.1 68416.m04871 cycloartenol synthase, putative /
2,3-epoxysqualene--cycloartenol cyclase, putative /
(S)-2,3-epoxysqualene mutase, putative 77% similar to
cycloartenol synthase [SP|P38605|gi:452446] [PMID:
7505443]; oxidosqualene cyclase LcOSC2 - Luffa
cylindrica, EMBL:AB033335
Length = 748
Score = 26.6 bits (56), Expect = 3.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 202 PTRMWCLCRTLQLP 161
P RMWC CR + LP
Sbjct: 251 PGRMWCHCRMVYLP 264
>At2g07050.1 68415.m00806 cycloartenol synthase (CAS1) /
2,3-epoxysqualene--cycloartenol cyclase /
(S)-2,3-epoxysqualene mutase identical to cycloartenol
synthase [SP:P38605 | GI:452446] [PMID:7505443]
Length = 759
Score = 26.6 bits (56), Expect = 3.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 202 PTRMWCLCRTLQLP 161
P RMWC CR + LP
Sbjct: 251 PGRMWCHCRMVYLP 264
>At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar to
beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
GI:8918271 from [Pisum sativum]
Length = 769
Score = 26.2 bits (55), Expect = 5.0
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3
Query: 202 PTRMWCLCRTLQLP 161
P +MWC CR + +P
Sbjct: 254 PAKMWCYCRLVYMP 267
>At5g64090.1 68418.m08049 expressed protein
Length = 448
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 185 PLPYAATAGYPLSYVSSLSVPTVYSSAFTGFYPQSADAND 66
P P ++T+ S++ PT ++A +GF P +A D
Sbjct: 12 PSPSSSTSSSTPHRFKSVTTPTATAAAVSGFSPSAAADRD 51
>At5g15420.1 68418.m01805 expressed protein
Length = 159
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -3
Query: 178 RTLQLPATPFPTCHPYLYLPSTALHSP 98
R L++ ++P P HPYL+ ++ ++SP
Sbjct: 128 RGLEIDSSPSPETHPYLF--NSCINSP 152
>At5g14780.1 68418.m01734 formate dehydrogenase (FDH) identical to
GI:7677266
Length = 384
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = -3
Query: 154 PFPTCHPYLYLPSTAL--HSPASTHKAQMQ 71
P P HP+ Y+P+ A+ H+ +T AQ++
Sbjct: 320 PAPKDHPWRYMPNQAMTPHTSGTTIDAQLR 349
>At1g70130.1 68414.m08070 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733
Length = 656
Score = 25.8 bits (54), Expect = 6.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 148 PTCHPYLYLPSTALHSPASTH 86
P H Y+Y+ T++ SP S+H
Sbjct: 220 PYLHEYMYIGFTSVGSPTSSH 240
>At2g25480.1 68415.m03051 expressed protein
Length = 404
Score = 25.4 bits (53), Expect = 8.8
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -3
Query: 184 LCRTLQLPATPFPTCHPYLYLPSTALHSPASTHKAQMQMMRACVN 50
L ++L ATP PT + LP T L A T ++ R N
Sbjct: 230 LRKSLNFKATPMPTFYQEPQLPKTELKKIAITRPKSPKLGRKKTN 274
>At2g03800.1 68415.m00339 expressed protein
Length = 317
Score = 25.4 bits (53), Expect = 8.8
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 213 GEESQHCDQKRLKHFDNLSLAKFDCTRFALIGRPNSF 323
GE H D K K + ++ +F +G+PN F
Sbjct: 280 GEILAHLDHKSFKGWQKKAITEFLAEESINVGKPNDF 316
>At1g64300.1 68414.m07287 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 717
Score = 25.4 bits (53), Expect = 8.8
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 232 QCWLSSPARRPTRMWCLCRTLQ 167
+CW S P++RPT +CR L+
Sbjct: 490 RCWHSEPSQRPT-FSSICRILR 510
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,556,558
Number of Sequences: 28952
Number of extensions: 118987
Number of successful extensions: 452
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 360538848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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