Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D21
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   6.1  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   6.1  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 743 KLTKKNXFLIFSTKIIVFFSYGNIRL 666
           KLT +   +I  TKI   FS G +++
Sbjct: 85  KLTNRESSIIDKTKISFNFSQGPVKI 110


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/54 (20%), Positives = 25/54 (46%)
 Frame = -1

Query: 744 ETNKKKXLSHFFHKNNRVFFVWQH*IIHDSFKSST*RSFLNQYSKCTFKI*IHD 583
           + +K +   H +  NN ++   +   I++S + S  + +LN +      +  HD
Sbjct: 28  DCDKNQNTEHNYTHNNEMYHSVKEEPIYESCRFSINQPYLNHFDNSVTPMVNHD 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,867
Number of Sequences: 336
Number of extensions: 2776
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)