Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D19
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81484-6|CAB03968.2|  314|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z81484-1|CAB03967.1|  314|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z48009-5|CAA88086.1|  329|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AF016449-2|AAG24006.1|  333|Caenorhabditis elegans Seven tm rece...    29   4.2  
Z92829-16|CAE46671.1|  284|Caenorhabditis elegans Hypothetical p...    28   5.5  
Z92829-10|CAB07350.2|  319|Caenorhabditis elegans Hypothetical p...    28   5.5  
Z92804-6|CAE46675.1|  284|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AL132859-2|CAB60488.1|  315|Caenorhabditis elegans Hypothetical ...    28   5.5  
U39744-1|AAK18882.1|  471|Caenorhabditis elegans Hypothetical pr...    28   7.3  

>Z81484-6|CAB03968.2|  314|Caenorhabditis elegans Hypothetical
           protein C47A10.3 protein.
          Length = 314

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +3

Query: 198 TYNVFDERYYIIIVNYYCVAVHYY--FFCQYIYSFTYF 305
           T ++F+ RYY+I   +       Y  F   YIYS TY+
Sbjct: 109 TVSIFENRYYLIFAKHTWRRFGRYPFFLLNYIYSLTYY 146


>Z81484-1|CAB03967.1|  314|Caenorhabditis elegans Hypothetical
           protein C47A10.2 protein.
          Length = 314

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +3

Query: 198 TYNVFDERYYIIIV--NYYCVAVHYYFFCQYIYSFTYF 305
           T ++F+ RYY+I     ++    + +F   YIY+ TY+
Sbjct: 109 TVSIFENRYYLIFAKHTWWRFGRYPFFLLNYIYALTYY 146


>Z48009-5|CAA88086.1|  329|Caenorhabditis elegans Hypothetical
           protein AH6.7 protein.
          Length = 329

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/54 (24%), Positives = 24/54 (44%)
 Frame = +3

Query: 210 FDERYYIIIVNYYCVAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHYSIWIY 371
           F +R  I   +  C    + F   +IYSF  F L    + +  +  + + +W+Y
Sbjct: 226 FRKREVIDSTSTICFLTFFQFIFMFIYSFGVFLLGTIREIIGYEQYYFWVVWVY 279


>Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical
           protein F14F8.12 protein.
          Length = 329

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
 Frame = -3

Query: 480 FLVDFIFFFCCIFNVACVL----HIIYFIFVIFLTIKYCY 373
           F+  FI  F  +F +  +L    H+I F+  +F ++KY +
Sbjct: 71  FIATFILLFIILFYILHILQQTFHVILFLLAVFNSLKYIF 110


>AF016449-2|AAG24006.1|  333|Caenorhabditis elegans Seven tm
           receptor protein 244 protein.
          Length = 333

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 480 FLVDFIFFFCCIFNVACVLHIIYFIF 403
           F V F   FC +F V+ V+ +I+FI+
Sbjct: 87  FQVPFTNIFCSMFGVSLVIFVIHFIY 112


>Z92829-16|CAE46671.1|  284|Caenorhabditis elegans Hypothetical
           protein K05D4.9 protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 465 IFFFCCIFNVACVLHIIYFIFVIFLTIKYCYY 370
           IFF CC F +   +HI    F+IF  +K   Y
Sbjct: 21  IFFSCCDFFIKPNMHITKTSFIIFTDLKRSGY 52


>Z92829-10|CAB07350.2|  319|Caenorhabditis elegans Hypothetical
           protein F10A3.15 protein.
          Length = 319

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 465 IFFFCCIFNVACVLHIIYFIFVIFLTIKYCYY 370
           IFF CC F +   +HI    F+IF  +K   Y
Sbjct: 55  IFFSCCDFFIKPNMHITKTSFIIFTDLKRSGY 86


>Z92804-6|CAE46675.1|  284|Caenorhabditis elegans Hypothetical
           protein K05D4.9 protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 465 IFFFCCIFNVACVLHIIYFIFVIFLTIKYCYY 370
           IFF CC F +   +HI    F+IF  +K   Y
Sbjct: 21  IFFSCCDFFIKPNMHITKTSFIIFTDLKRSGY 52


>AL132859-2|CAB60488.1|  315|Caenorhabditis elegans Hypothetical
           protein Y39C12A.3 protein.
          Length = 315

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = -3

Query: 465 IFFFCCIFNVACVLHIIYFIFVIFLTIKYCYYKS 364
           +F F  I NV   + I+Y+IF +++TI+  +YK+
Sbjct: 20  LFAFVAISNV---ISILYYIFNLYVTIRVKHYKN 50


>U39744-1|AAK18882.1|  471|Caenorhabditis elegans Hypothetical
           protein C03F11.1 protein.
          Length = 471

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = +2

Query: 545 AISYHNYYYHTN*LIIKVIDCLTINASDHKILI 643
           A+ YH   YH N ++++++DC    A D ++++
Sbjct: 123 ALLYHIILYHLNDIVLELVDC---GADDWRVVV 152


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,937,383
Number of Sequences: 27780
Number of extensions: 278104
Number of successful extensions: 706
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)