Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_D18
(531 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17049| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 8e-10
SB_32212| Best HMM Match : Histone (HMM E-Value=9.4e-33) 54 5e-08
SB_56326| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_54197| Best HMM Match : Histone (HMM E-Value=9.4e-33) 53 2e-07
SB_48204| Best HMM Match : Histone (HMM E-Value=2.7e-32) 53 2e-07
SB_32396| Best HMM Match : Histone (HMM E-Value=9.4e-33) 53 2e-07
SB_31835| Best HMM Match : Histone (HMM E-Value=9.4e-33) 53 2e-07
SB_29633| Best HMM Match : Histone (HMM E-Value=5.3e-31) 53 2e-07
SB_28838| Best HMM Match : Histone (HMM E-Value=9.4e-33) 53 2e-07
SB_14747| Best HMM Match : Histone (HMM E-Value=9.4e-33) 53 2e-07
SB_54382| Best HMM Match : Histone (HMM E-Value=9.4e-33) 53 2e-07
SB_45182| Best HMM Match : Histone (HMM E-Value=9.4e-33) 53 2e-07
SB_42476| Best HMM Match : Histone (HMM E-Value=9.4e-33) 53 2e-07
SB_25226| Best HMM Match : Histone (HMM E-Value=9.4e-33) 53 2e-07
SB_19336| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_11028| Best HMM Match : Histone (HMM E-Value=9.4e-33) 53 2e-07
SB_9842| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_8583| Best HMM Match : Histone (HMM E-Value=9.4e-33) 53 2e-07
SB_8319| Best HMM Match : Histone (HMM E-Value=9.4e-33) 53 2e-07
SB_7498| Best HMM Match : Histone (HMM E-Value=9.4e-33) 53 2e-07
SB_54557| Best HMM Match : PHK_AB (HMM E-Value=0) 52 4e-07
SB_3888| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_56156| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 9e-07
SB_55462| Best HMM Match : Histone (HMM E-Value=4.8e-33) 50 9e-07
SB_46252| Best HMM Match : Histone (HMM E-Value=4.8e-33) 50 9e-07
SB_5065| Best HMM Match : Histone (HMM E-Value=2.6e-33) 50 9e-07
SB_1105| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 9e-07
SB_54707| Best HMM Match : Histone (HMM E-Value=9.4e-33) 50 9e-07
SB_31727| Best HMM Match : Histone (HMM E-Value=5e-33) 50 9e-07
SB_31723| Best HMM Match : Histone (HMM E-Value=0.016) 50 9e-07
SB_28189| Best HMM Match : Histone (HMM E-Value=1.5e-12) 50 9e-07
SB_26809| Best HMM Match : Histone (HMM E-Value=4.8e-33) 50 9e-07
SB_25701| Best HMM Match : Histone (HMM E-Value=4.8e-33) 50 9e-07
SB_24673| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 9e-07
SB_18628| Best HMM Match : Histone (HMM E-Value=1.5e-31) 50 9e-07
SB_55892| Best HMM Match : Histone (HMM E-Value=9.4e-33) 50 2e-06
SB_1956| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_57971| Best HMM Match : Histone (HMM E-Value=5.4e-33) 49 2e-06
SB_38873| Best HMM Match : Histone (HMM E-Value=2.6e-33) 49 2e-06
SB_7769| Best HMM Match : Histone (HMM E-Value=0.2) 40 0.001
SB_50166| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.016
SB_58451| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_38686| Best HMM Match : 7tm_1 (HMM E-Value=5.70048e-42) 29 2.4
SB_20073| Best HMM Match : F5_F8_type_C (HMM E-Value=2.9e-18) 29 2.4
SB_27184| Best HMM Match : 7tm_1 (HMM E-Value=1.8e-05) 28 5.4
SB_16639| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_25269| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_35405| Best HMM Match : TraI (HMM E-Value=2.1) 27 9.5
SB_8792| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_4675| Best HMM Match : DUF842 (HMM E-Value=1.5) 27 9.5
SB_30541| Best HMM Match : PSI_PsaJ (HMM E-Value=4) 27 9.5
>SB_17049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 60.5 bits (140), Expect = 8e-10
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = -3
Query: 529 KXITPRHLQLAIRGDEELDSLIKATIAXGGV 437
K ITPRHLQLAIRGDEELDSLIKATIA GGV
Sbjct: 150 KRITPRHLQLAIRGDEELDSLIKATIAGGGV 180
>SB_32212| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 54.4 bits (125), Expect = 5e-08
Identities = 27/42 (64%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ ATIA GGV+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGATIAQGGVLPNIQASLLPKK 119
>SB_56326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 54.0 bits (124), Expect = 7e-08
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXGPG 389
I PRHLQLA+R DEEL+ L++ TIA GGV+P+I L+ KK G
Sbjct: 42 IVPRHLQLAVRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSNTG 87
>SB_54197| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_48204| Best HMM Match : Histone (HMM E-Value=2.7e-32)
Length = 125
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_32396| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_31835| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_29633| Best HMM Match : Histone (HMM E-Value=5.3e-31)
Length = 125
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_28838| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_14747| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_54382| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_45182| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_42476| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_25226| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_19336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_11028| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_9842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_8583| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_8319| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_7498| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_54557| Best HMM Match : PHK_AB (HMM E-Value=0)
Length = 863
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/42 (59%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L++ TIA GGV+P+I L+ KK
Sbjct: 815 IIPRHLQLAVRNDEELNRLLRGVTIAQGGVLPNIQAVLLPKK 856
>SB_3888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 986
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/44 (54%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXG 395
I PRH+ LA+ DEEL L+K TIA GGV+P+IH L+ K+ G
Sbjct: 713 IIPRHILLAVANDEELHKLLKGVTIASGGVLPNIHPELLKKRKG 756
>SB_56156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 119
>SB_55462| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 126
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 119
>SB_46252| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 134
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 86 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 127
>SB_5065| Best HMM Match : Histone (HMM E-Value=2.6e-33)
Length = 330
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 119
>SB_1105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 448 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 489
>SB_54707| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 126
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 119
>SB_31727| Best HMM Match : Histone (HMM E-Value=5e-33)
Length = 126
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 119
>SB_31723| Best HMM Match : Histone (HMM E-Value=0.016)
Length = 76
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 28 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 69
>SB_28189| Best HMM Match : Histone (HMM E-Value=1.5e-12)
Length = 90
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 42 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 83
>SB_26809| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 126
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 119
>SB_25701| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 126
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 119
>SB_24673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 119
>SB_18628| Best HMM Match : Histone (HMM E-Value=1.5e-31)
Length = 126
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 119
>SB_55892| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA G V+P+I SL+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTIAQGRVLPNIQASLLPKK 119
>SB_1956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/42 (57%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLI-KATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ K+
Sbjct: 78 IIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKR 119
>SB_57971| Best HMM Match : Histone (HMM E-Value=5.4e-33)
Length = 125
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/42 (57%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TI+ GGV+P+I L+ KK
Sbjct: 78 IIPRHLQLAVRNDEELNRLLHGVTISQGGVLPNIQAVLLPKK 119
>SB_38873| Best HMM Match : Histone (HMM E-Value=2.6e-33)
Length = 125
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/42 (57%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLI-KATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ K+
Sbjct: 78 IIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKR 119
>SB_7769| Best HMM Match : Histone (HMM E-Value=0.2)
Length = 150
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/30 (66%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGV 437
I PRHLQLA+R DEEL+ L+ TIA GGV
Sbjct: 25 IIPRHLQLAVRNDEELNRLLHGVTIAQGGV 54
>SB_50166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 36.3 bits (80), Expect = 0.016
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -3
Query: 502 LAIRGDEELDSLIKA-TIAXGGVIPHIHKSLIGKK 401
LA+R DEEL+ L+ TIA GGV+P+I L+ K+
Sbjct: 1 LAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKR 35
>SB_58451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 30.7 bits (66), Expect = 0.77
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 117 FKCPMNKQKLSLILIQSYFKSPYSLHISITYSYIFSPDQQF-QSHHCPLH 263
F P + L S F P+S+ ISI S +++ +QF Q HH +H
Sbjct: 295 FGTPSKDNGFTSFLFVSSFVIPFSILISIYLSILWTARKQFRQVHHAKIH 344
>SB_38686| Best HMM Match : 7tm_1 (HMM E-Value=5.70048e-42)
Length = 366
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 459 QLSLXEASSHTYTNLSLERKXVLVHPFNFKL 367
Q +L S T+T ++LER ++HPF KL
Sbjct: 119 QDALVSVSVFTFTAIALERYRAIIHPFKPKL 149
>SB_20073| Best HMM Match : F5_F8_type_C (HMM E-Value=2.9e-18)
Length = 593
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIKATIAXGGVIPHIHKSLIGKKXGPG 389
+T +H+ + R + LIK + G H+H+ L G++ G
Sbjct: 207 LTAKHINITNRTANVVKKLIKIGLLTNGSTTHVHRFLKGQRNNTG 251
>SB_27184| Best HMM Match : 7tm_1 (HMM E-Value=1.8e-05)
Length = 170
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -1
Query: 450 LXEASSHTYTNLSLERKXVLVHP--FNFKL*DDKI 352
L ASS T T L++ER +VHP FKL D +
Sbjct: 91 LTTASSFTLTVLAVERYQAIVHPMCMRFKLRDGAV 125
>SB_16639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -1
Query: 459 QLSLXEASSHTYTNLSLERKXVLVHPFNFKL*DDKIIL 346
Q +L S +T+ ++LER +++PF KL K+++
Sbjct: 115 QDALVSVSVYTFVVIALERYRAIINPFKPKLSKSKVLI 152
>SB_25269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Frame = +2
Query: 302 GDDLCRCVTTAGIKCSIILSSHNLKLNGCTRTXFLSNERFVYVWDDAS---XSDSCFYE 469
G CR + T G +C ++ S K N C F + F + +A DSC E
Sbjct: 632 GSITCRIIKTVGDRCLDLVPSRIFKHNSCGIALFQNTYMFFFEGSNADCFPVHDSCAKE 690
>SB_35405| Best HMM Match : TraI (HMM E-Value=2.1)
Length = 332
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -1
Query: 108 CNWWDMHSSVIVVHCTDLYLSLTDCDTI 25
C WD+ V+ HCT L S C ++
Sbjct: 18 CRRWDVFLQVVRAHCTALRQSRRSCKSL 45
>SB_8792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1045
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +3
Query: 84 CYAYPTSYIQNFKCPMNKQKLSLILIQSYFKSPYSLHISI 203
C Y T YI++ CP + I + F+ P + + S+
Sbjct: 705 CGEYDTEYIESGVCPQTESMSQAISLNGSFQRPSTSNTSV 744
>SB_4675| Best HMM Match : DUF842 (HMM E-Value=1.5)
Length = 160
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 66 SELQ*HCYAYPTSY---IQNFKCPMNKQKLSLI 155
SEL+ H Y PTSY I FK +NK++ ++
Sbjct: 109 SELKRHNYVTPTSYLELISTFKALLNKKQQEVV 141
>SB_30541| Best HMM Match : PSI_PsaJ (HMM E-Value=4)
Length = 368
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 439 VIPHIHKSLIGKKXG 395
V PH+HK+L+G K G
Sbjct: 37 VFPHLHKALLGAKAG 51
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,184,172
Number of Sequences: 59808
Number of extensions: 305121
Number of successful extensions: 640
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1191330434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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