Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D18
         (531 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09951-1|CAA71082.1|  107|Anopheles gambiae histone H2a protein.       41   2e-05
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    26   0.91 
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   6.4  

>Y09951-1|CAA71082.1|  107|Anopheles gambiae histone H2a protein.
          Length = 107

 Score = 41.1 bits (92), Expect = 2e-05
 Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
 Frame = -3

Query: 529 KXITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
           + I PR LQLAIR DEE + L++  TIA GGV+P+I   L+ K+
Sbjct: 62  RRIIPR-LQLAIRNDEEENKLLRRVTIAQGGVLPNIQAVLLPKR 104


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 25.8 bits (54), Expect = 0.91
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 459 QLSLXEASSHTYTNLSLERKXVLVHPFNF 373
           Q+ +  AS++    LS++R   + HP NF
Sbjct: 306 QVCVTYASTYVLVALSIDRYDAITHPMNF 334


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 467 HKSNYRXRRRHPTHTQISH 411
           HK   R + ++PTH+  +H
Sbjct: 250 HKRRTRKQNKNPTHSSTAH 268


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,116
Number of Sequences: 2352
Number of extensions: 10134
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)