Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_D18
(531 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61953-11|AAC48074.1| 140|Caenorhabditis elegans Hypothetical p... 78 3e-15
Z93388-8|CAB07656.1| 127|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z92789-4|CAB07221.1| 127|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z83245-10|CAB05838.1| 127|Caenorhabditis elegans Hypothetical p... 53 1e-07
Z83245-6|CAB05836.1| 127|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z82271-4|CAB05212.1| 127|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z81495-2|CAB04056.1| 127|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z81128-6|CAB03399.1| 127|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z73102-8|CAA97414.1| 127|Caenorhabditis elegans Hypothetical pr... 53 1e-07
X15633-1|CAA33641.1| 127|Caenorhabditis elegans histone protein... 53 1e-07
U64845-8|AAC48024.1| 127|Caenorhabditis elegans Histone protein... 53 1e-07
U64843-8|AAF98222.1| 127|Caenorhabditis elegans Histone protein... 53 1e-07
U64843-5|AAF98219.1| 127|Caenorhabditis elegans Histone protein... 53 1e-07
U58750-7|AAB00647.1| 127|Caenorhabditis elegans Histone protein... 53 1e-07
U40934-9|AAA81686.1| 127|Caenorhabditis elegans Histone protein... 53 1e-07
AF047656-4|AAC05100.1| 127|Caenorhabditis elegans Histone prote... 53 1e-07
AC024696-8|AAK84512.1| 127|Caenorhabditis elegans Histone prote... 53 1e-07
AC024696-5|AAK84506.1| 127|Caenorhabditis elegans Histone prote... 53 1e-07
Z70750-11|CAA94747.1| 127|Caenorhabditis elegans Hypothetical p... 51 5e-07
Z68222-1|CAA92497.1| 145|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z81564-6|CAB04572.1| 678|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF016853-1|AAB94552.1| 678|Caenorhabditis elegans HMP-2 protein. 29 2.1
Z83238-1|CAB05792.1| 339|Caenorhabditis elegans Hypothetical pr... 27 6.3
AF040652-2|AAB95019.1| 221|Caenorhabditis elegans Hypothetical ... 27 8.4
AF039047-4|AAB94225.1| 224|Caenorhabditis elegans Hypothetical ... 27 8.4
>U61953-11|AAC48074.1| 140|Caenorhabditis elegans Hypothetical
protein R08C7.3 protein.
Length = 140
Score = 78.2 bits (184), Expect = 3e-15
Identities = 36/46 (78%), Positives = 39/46 (84%)
Frame = -3
Query: 529 KXITPRHLQLAIRGDEELDSLIKATIAXGGVIPHIHKSLIGKKXGP 392
K ITPRHL LAIRGDEELD+LIKATIA GGVIPHIH+ L+ KK P
Sbjct: 82 KRITPRHLHLAIRGDEELDTLIKATIAGGGVIPHIHRYLMNKKGAP 127
>Z93388-8|CAB07656.1| 127|Caenorhabditis elegans Hypothetical
protein T10C6.12 protein.
Length = 127
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXG 395
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 80 IAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z92789-4|CAB07221.1| 127|Caenorhabditis elegans Hypothetical
protein H02I12.7 protein.
Length = 127
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXG 395
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 80 IAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z83245-10|CAB05838.1| 127|Caenorhabditis elegans Hypothetical
protein ZK131.10 protein.
Length = 127
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXG 395
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 80 IAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z83245-6|CAB05836.1| 127|Caenorhabditis elegans Hypothetical
protein ZK131.6 protein.
Length = 127
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXG 395
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 80 IAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z82271-4|CAB05212.1| 127|Caenorhabditis elegans Hypothetical
protein F54E12.5 protein.
Length = 127
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXG 395
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 80 IAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z81495-2|CAB04056.1| 127|Caenorhabditis elegans Hypothetical
protein F08G2.2 protein.
Length = 127
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXG 395
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 80 IAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z81128-6|CAB03399.1| 127|Caenorhabditis elegans Hypothetical
protein T23D8.6 protein.
Length = 127
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXG 395
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 80 IAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z73102-8|CAA97414.1| 127|Caenorhabditis elegans Hypothetical
protein B0035.7 protein.
Length = 127
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXG 395
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 80 IAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>X15633-1|CAA33641.1| 127|Caenorhabditis elegans histone protein
protein.
Length = 127
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXG 395
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 80 IAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>U64845-8|AAC48024.1| 127|Caenorhabditis elegans Histone protein 7
protein.
Length = 127
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXG 395
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 80 IAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>U64843-8|AAF98222.1| 127|Caenorhabditis elegans Histone protein 19
protein.
Length = 127
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXG 395
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 80 IAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>U64843-5|AAF98219.1| 127|Caenorhabditis elegans Histone protein 21
protein.
Length = 127
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXG 395
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 80 IAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>U58750-7|AAB00647.1| 127|Caenorhabditis elegans Histone protein 61
protein.
Length = 127
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXG 395
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 80 IAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>U40934-9|AAA81686.1| 127|Caenorhabditis elegans Histone protein 30
protein.
Length = 127
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXG 395
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 80 IAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>AF047656-4|AAC05100.1| 127|Caenorhabditis elegans Histone protein
33 protein.
Length = 127
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXG 395
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 80 IAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>AC024696-8|AAK84512.1| 127|Caenorhabditis elegans Histone protein
53 protein.
Length = 127
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXG 395
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 80 IAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>AC024696-5|AAK84506.1| 127|Caenorhabditis elegans Histone protein
51 protein.
Length = 127
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKKXG 395
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 80 IAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z70750-11|CAA94747.1| 127|Caenorhabditis elegans Hypothetical
protein C50F4.13 protein.
Length = 127
Score = 51.2 bits (117), Expect = 5e-07
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLIK-ATIAXGGVIPHIHKSLIGKK 401
I PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 80 IAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKK 121
>Z68222-1|CAA92497.1| 145|Caenorhabditis elegans Hypothetical
protein ZK1251.1 protein.
Length = 145
Score = 44.8 bits (101), Expect = 4e-05
Identities = 24/43 (55%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = -3
Query: 523 ITPRHLQLAIRGDEELDSLI-KATIAXGGVIP-HIHKSLIGKK 401
+TPRHL LAI GD+E L+ K T+ GGV P IH SL+ KK
Sbjct: 92 VTPRHLHLAIYGDQETAQLLDKVTLPQGGVTPMPIHPSLLPKK 134
>Z81564-6|CAB04572.1| 678|Caenorhabditis elegans Hypothetical
protein K05C4.6 protein.
Length = 678
Score = 29.1 bits (62), Expect = 2.1
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = -1
Query: 348 LHLIPAVVTHLHKSSPRLVNIV---FY*NNISEVDSGVT--GTVGPD*ICSYK**KYVEN 184
L+ + A+ HLHK++P+L+ V Y I + S +T +GP + S +Y ++
Sbjct: 204 LNAVEALTPHLHKTNPKLLAQVADGLYFLLIDDAPSKITFLSLLGPQILVSIL-REYSDH 262
Query: 183 KEI*NMIVLELRIISVC 133
+++ +V +R +SVC
Sbjct: 263 RKLIYTVVRCIRSLSVC 279
>AF016853-1|AAB94552.1| 678|Caenorhabditis elegans HMP-2 protein.
Length = 678
Score = 29.1 bits (62), Expect = 2.1
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = -1
Query: 348 LHLIPAVVTHLHKSSPRLVNIV---FY*NNISEVDSGVT--GTVGPD*ICSYK**KYVEN 184
L+ + A+ HLHK++P+L+ V Y I + S +T +GP + S +Y ++
Sbjct: 204 LNAVEALTPHLHKTNPKLLAQVADGLYFLLIDDAPSKITFLSLLGPQILVSIL-REYSDH 262
Query: 183 KEI*NMIVLELRIISVC 133
+++ +V +R +SVC
Sbjct: 263 RKLIYTVVRCIRSLSVC 279
>Z83238-1|CAB05792.1| 339|Caenorhabditis elegans Hypothetical
protein T08G3.1 protein.
Length = 339
Score = 27.5 bits (58), Expect = 6.3
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 60 PCSELQ*HCYAYPTSYIQNFKCPMNKQKLSLILIQSYFKSPYSLHISI-TYSYIFSPDQQ 236
P S L H AY YI N +K+ L+++L + + S Y IS+ +I+ +
Sbjct: 63 PASGLHSHSAAYIV-YINNRPFDASKEFLTVLL--AVYCSLYCAAISLLAVQFIY----R 115
Query: 237 FQSHHCPLH*YYFNR 281
+ + CP+H YFN+
Sbjct: 116 YIAVFCPIHLKYFNK 130
>AF040652-2|AAB95019.1| 221|Caenorhabditis elegans Hypothetical
protein T05A8.2 protein.
Length = 221
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 402 FFPMRDLCMCGMTPPXAIVAFMRLSNSSSPLIAS-CKCRG 518
+FP +D+C G+T V LSNS P+ S C G
Sbjct: 91 WFPYQDVCWNGLTSIPQAVFQSELSNSHQPVPQSESSCSG 130
>AF039047-4|AAB94225.1| 224|Caenorhabditis elegans Hypothetical
protein K11D12.5 protein.
Length = 224
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 122 MSHEQTEIILNSNTIIF*ISLFSTYFYY 205
M+++QT II+NS ++F S + YY
Sbjct: 58 MTNDQTNIIINSINLVFFAFYVSAFAYY 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,286,911
Number of Sequences: 27780
Number of extensions: 230282
Number of successful extensions: 513
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -