Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D16
         (375 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132948-37|CAD31830.2|  410|Caenorhabditis elegans Hypothetical...    28   1.9  
Z82082-5|CAE53733.1|   72|Caenorhabditis elegans Hypothetical pr...    27   5.8  
AF125461-6|AAK18992.1|   98|Caenorhabditis elegans Insulin relat...    27   5.8  
AC024791-20|AAO12400.1|  574|Caenorhabditis elegans Hypothetical...    27   5.8  
AC024791-19|AAF60657.2|  618|Caenorhabditis elegans Hypothetical...    27   5.8  
Z32682-2|CAA83611.1|   83|Caenorhabditis elegans Hypothetical pr...    26   7.6  

>AL132948-37|CAD31830.2|  410|Caenorhabditis elegans Hypothetical
           protein Y39B6A.38 protein.
          Length = 410

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
 Frame = -2

Query: 236 TQQPQEVHTYCGRHLART---MADLCWEE-GVD-------KRSDAQCASYGSAWLMPD 96
           T++ QE +T C RHL +T    ADLC    G D       KRS    +S    W + D
Sbjct: 47  TEKQQEYYTKCFRHLIKTTQGAADLCGALCGADQRIVAFFKRSSLDMSSLSKIWSLAD 104


>Z82082-5|CAE53733.1|   72|Caenorhabditis elegans Hypothetical
           protein ZC334.8 protein.
          Length = 72

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -2

Query: 284 ILLAIALMLSTVMWVSTQQPQEVHTYCGRHLARTMADLC 168
           +L  I ++   ++ +S  +P E    CGR+L R + +LC
Sbjct: 1   MLFKIIILFFLLLQLSEAKP-EAQRRCGRYLIRFLGELC 38


>AF125461-6|AAK18992.1|   98|Caenorhabditis elegans Insulin related
           protein 32 protein.
          Length = 98

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 206 CGRHLARTMADLCWEEGVDKRSD 138
           CGR L++T+ +LC E    K  D
Sbjct: 52  CGRRLSKTVTNLCVEMNPQKEED 74


>AC024791-20|AAO12400.1|  574|Caenorhabditis elegans Hypothetical
           protein Y47G6A.5b protein.
          Length = 574

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +1

Query: 28  PPSARPRCRVCSSTHPRLPRPAESGISHAEP 120
           PP  RP  +  SST PR P P     S+  P
Sbjct: 14  PPPLRPSTQSVSSTDPRPPIPPRRSESNLVP 44


>AC024791-19|AAF60657.2|  618|Caenorhabditis elegans Hypothetical
           protein Y47G6A.5a protein.
          Length = 618

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +1

Query: 28  PPSARPRCRVCSSTHPRLPRPAESGISHAEP 120
           PP  RP  +  SST PR P P     S+  P
Sbjct: 58  PPPLRPSTQSVSSTDPRPPIPPRRSESNLVP 88


>Z32682-2|CAA83611.1|   83|Caenorhabditis elegans Hypothetical
           protein M04D8.2 protein.
          Length = 83

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 284 ILLAIALMLSTVMWVSTQQPQEVHTYCGRHLARTMADLC 168
           IL+   + L  V  +     + V T CG+   R +A+LC
Sbjct: 6   ILICFFIFLVQVSTMDAHTDKYVRTLCGKTAIRNIANLC 44


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,696,576
Number of Sequences: 27780
Number of extensions: 158152
Number of successful extensions: 457
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)