Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D15
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.51 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 300  TTPWPRSDSTIRTTATDPT 356
            T+PW  + +T RTT T PT
Sbjct: 1048 TSPWWTTTTTRRTTTTRPT 1066


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 251 RPHPYTTSGHSPATELTNITKNLTSLKY 168
           +PHP T     P T       N+T+LK+
Sbjct: 437 KPHPNTYQIADPVTNEIKGVYNMTNLKF 464


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 248 PHPYTTSGHSPATELTNITKNL 183
           P P TTS  SPA+  +N +  L
Sbjct: 34  PPPATTSSGSPASVASNASAPL 55


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +1

Query: 283 FQLSPPRRHGLAQTPQFGQQRQIQLTQAGH 372
           F ++P RR+       F      QLT  GH
Sbjct: 336 FTITPGRRYRFRMINSFASVCPAQLTIQGH 365


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +1

Query: 283 FQLSPPRRHGLAQTPQFGQQRQIQLTQAGH 372
           F ++P RR+       F      QLT  GH
Sbjct: 336 FTITPGRRYRFRMINSFASVCPAQLTIQGH 365


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,728
Number of Sequences: 336
Number of extensions: 2655
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)