Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D15
         (619 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009...    32   0.32 
04_04_1686 + 35362454-35362781,35362891-35363165,35363770-35363880     30   1.3  
08_02_0785 + 21190002-21190253,21190452-21190523,21191498-211916...    29   3.9  
03_06_0656 - 35330109-35331011,35331154-35331360,35331455-353316...    29   3.9  
11_05_0007 - 18324969-18325063,18326580-18326745,18327078-183272...    28   5.2  
06_02_0233 + 13315579-13316046                                         27   9.0  

>03_06_0365 -
           33399422-33399925,33400470-33400583,33400762-33400929,
           33401305-33401547,33402148-33402231,33402323-33403098,
           33404423-33404636
          Length = 700

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -3

Query: 299 GGDSWNGRRDSDQHHHRPHPYTTSGHSPATELTNITKNLTSLKYKA 162
           GG  WN R   D+    P+P+  S    ATE+   T N T + + A
Sbjct: 175 GGGGWNSRPGWDRRDREPNPFANSEAEEATEVDFDTAN-TGINFDA 219


>04_04_1686 + 35362454-35362781,35362891-35363165,35363770-35363880
          Length = 237

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = -3

Query: 296 GDSWNGRRDSDQHHHRPHPYTTSGHSPA--TELTNITKNLTSLKYK 165
           G S+  R DS +HH RP P+ +  +S A    + ++  +  S+K++
Sbjct: 73  GSSFLQRLDSSRHHLRPAPHDSDANSDADTASIASLDDSFISIKFE 118


>08_02_0785 +
           21190002-21190253,21190452-21190523,21191498-21191631,
           21191700-21191850,21191938-21192087
          Length = 252

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 9/78 (11%)
 Frame = +1

Query: 256 WCWSESRRPFQLS-PPRRHGLAQTPQFGQQ------RQIQLTQAGHFFLEINEL*--IKI 408
           WC  +     ++   P +HG    P+          RQ  +    HFF+  N L   I I
Sbjct: 94  WCDEKGDLTCEICHEPYKHGYTALPRAHPDETTIDIRQASILYYSHFFIYFNYLPVPITI 153

Query: 409 GGWFFVGCVWRVRSIRIV 462
           GGW   G  + +   RI+
Sbjct: 154 GGWTITGTAFDLHDPRII 171


>03_06_0656 -
           35330109-35331011,35331154-35331360,35331455-35331632,
           35331726-35332221,35332889-35333033
          Length = 642

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 308 WRRGGDSWNGRRDSDQHHHRPHPYTTSGHSPAT 210
           +RRGG+  NGR +SD      H    +G  PAT
Sbjct: 519 YRRGGNQGNGRNESDSILSPAHFPALTGTIPAT 551


>11_05_0007 - 18324969-18325063,18326580-18326745,18327078-18327275,
            18327377-18327643,18328070-18328129,18328767-18329033,
            18329156-18329359,18329441-18331496,18332517-18333358
          Length = 1384

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = -3

Query: 575  WKFNNK*NIRYVNSSGRSAQCRC--KACP-HYRRVSVASRKTIRIL 447
            WK   K  I  + S GR   CRC  K  P H   ++++S+  I  L
Sbjct: 1227 WKQEEKEGIIKIGSFGRGGGCRCDIKVTPQHLESITISSKIVINSL 1272


>06_02_0233 + 13315579-13316046
          Length = 155

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 314 RPWRRGGDSWNGRRDSDQHHHRPHPYTTS 228
           RP  R G++W  R  S     RPHP  T+
Sbjct: 44  RPSPRYGEAWQSRTASRGRGRRPHPAGTA 72


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,839,845
Number of Sequences: 37544
Number of extensions: 288329
Number of successful extensions: 937
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)