Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D15
         (619 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35641-1|CAA84706.2|  863|Caenorhabditis elegans Hypothetical pr...    32   0.38 
Z30973-4|CAA83220.3|  431|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ...    29   3.5  
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ...    29   3.5  
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein...    29   3.5  
Z66513-10|CAH19084.1|  488|Caenorhabditis elegans Hypothetical p...    28   6.1  
Z66513-9|CAH19083.1|  561|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z66513-8|CAA91340.2|  563|Caenorhabditis elegans Hypothetical pr...    28   6.1  

>Z35641-1|CAA84706.2|  863|Caenorhabditis elegans Hypothetical
           protein C38H2.1 protein.
          Length = 863

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = -3

Query: 233 TSGHSPATELTNITKNLTSLKYKAIMIANVSLKDEIN 123
           +SGHS   E TNI KN  +++ + I+  ++  KDEI+
Sbjct: 299 SSGHSNNGEFTNIWKNTINIEMQDIIYIHLHQKDEIS 335


>Z30973-4|CAA83220.3|  431|Caenorhabditis elegans Hypothetical
           protein B0284.1 protein.
          Length = 431

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -3

Query: 224 HSPATELTNITKNLTSLKYKAIMIANVSLKDEINKADCHLCINYVR 87
           +S  T L  I + L +LKY A  I +    + +N A CH    Y++
Sbjct: 278 NSCKTSLRRIKEKLNNLKYSARTIRDQDESENVNVAKCHEVALYIQ 323


>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
            C10C6.1 protein.
          Length = 1565

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -3

Query: 278  RRDSDQHHHRPHPYTTS--GHSPATELTNITKNLTSL 174
            R  S+ HHH  HP +TS    +PAT  +    NL+ +
Sbjct: 1378 RSTSNSHHHHHHPASTSSVASAPATLPSTTPSNLSRM 1414


>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein 363,
            isoform b protein.
          Length = 2692

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -2

Query: 513  SLQGLPPLPKSLSGFAEXXXXXXXXXXTSNEKPPTDLDSQLVYLK 379
            SL GLPP+P  LS  +            SN+ P    +++L YLK
Sbjct: 2003 SLVGLPPMPAYLSSNSSLPPQHHHVSPLSNDSPSNSAENKL-YLK 2046


>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein 363,
            isoform a protein.
          Length = 2695

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -2

Query: 513  SLQGLPPLPKSLSGFAEXXXXXXXXXXTSNEKPPTDLDSQLVYLK 379
            SL GLPP+P  LS  +            SN+ P    +++L YLK
Sbjct: 2006 SLVGLPPMPAYLSSNSSLPPQHHHVSPLSNDSPSNSAENKL-YLK 2049


>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
            protein.
          Length = 1565

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -3

Query: 278  RRDSDQHHHRPHPYTTS--GHSPATELTNITKNLTSL 174
            R  S+ HHH  HP +TS    +PAT  +    NL+ +
Sbjct: 1378 RSTSNSHHHHHHPASTSSVASAPATLPSTTPSNLSRM 1414


>Z66513-10|CAH19084.1|  488|Caenorhabditis elegans Hypothetical
           protein F54D5.15b protein.
          Length = 488

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 305 RRGGDSWNGRRDSDQHHHRPHPYTTSGHS 219
           R+  +  N   D   HHH+PH + T+  S
Sbjct: 456 RQNSEMSNSNVDLSYHHHQPHSHMTTNSS 484


>Z66513-9|CAH19083.1|  561|Caenorhabditis elegans Hypothetical
           protein F54D5.15c protein.
          Length = 561

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 305 RRGGDSWNGRRDSDQHHHRPHPYTTSGHS 219
           R+  +  N   D   HHH+PH + T+  S
Sbjct: 529 RQNSEMSNSNVDLSYHHHQPHSHMTTNSS 557


>Z66513-8|CAA91340.2|  563|Caenorhabditis elegans Hypothetical
           protein F54D5.15a protein.
          Length = 563

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 305 RRGGDSWNGRRDSDQHHHRPHPYTTSGHS 219
           R+  +  N   D   HHH+PH + T+  S
Sbjct: 531 RQNSEMSNSNVDLSYHHHQPHSHMTTNSS 559


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,483,824
Number of Sequences: 27780
Number of extensions: 239713
Number of successful extensions: 799
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)