Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_D12
(579 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 24 1.1
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 24 1.1
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 24 1.1
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 23 2.5
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 21 5.7
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 21 5.7
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 21 5.7
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 7.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.6
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 23.8 bits (49), Expect = 1.1
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 389 QKPHRPSHRAPSRT 430
QKP +PS+R PS T
Sbjct: 1167 QKPTKPSYRPPSTT 1180
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.8 bits (49), Expect = 1.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3
Query: 457 PPSTPWAGSRPRRSSMRWSVR 395
PP P GS +R+ + W V+
Sbjct: 38 PPREPTVGSEVKRTYIEWGVK 58
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 23.8 bits (49), Expect = 1.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3
Query: 457 PPSTPWAGSRPRRSSMRWSVR 395
PP P GS +R+ + W V+
Sbjct: 38 PPREPTVGSEVKRTYIEWGVK 58
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 329 DEDDVVINAFKTFDEEGK 276
D DDV I F+T E GK
Sbjct: 106 DPDDVFIRKFETSFESGK 123
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.4 bits (43), Expect = 5.7
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1
Query: 415 SSFSDASLPRESKV 456
+SFSD+S+P+ K+
Sbjct: 477 TSFSDSSIPKVKKI 490
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.4 bits (43), Expect = 5.7
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1
Query: 415 SSFSDASLPRESKV 456
+SFSD+S+P+ K+
Sbjct: 477 TSFSDSSIPKVKKI 490
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.4 bits (43), Expect = 5.7
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1
Query: 415 SSFSDASLPRESKV 456
+SFSD+S+P+ K+
Sbjct: 477 TSFSDSSIPKVKKI 490
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.0 bits (42), Expect = 7.6
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 315 DVIFVRAAGHAVGE 356
D+I+VR+ G AVG+
Sbjct: 54 DIIWVRSDGTAVGD 67
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.6
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 428 SEKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDD 318
++KEL+E +A + +L SGG+ +DD
Sbjct: 1069 TKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTSDDD 1105
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.6
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 428 SEKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDD 318
++KEL+E +A + +L SGG+ +DD
Sbjct: 1069 TKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTSDDD 1105
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.6
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 428 SEKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDD 318
++KEL+E +A + +L SGG+ +DD
Sbjct: 1069 TKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTSDDD 1105
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.6
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 428 SEKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDD 318
++KEL+E +A + +L SGG+ +DD
Sbjct: 1069 TKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTSDDD 1105
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,903
Number of Sequences: 336
Number of extensions: 1631
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -