Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D11
         (828 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000F20D13 Cluster: PREDICTED: hypothetical protein;...    35   2.2  
UniRef50_A4C8I2 Cluster: Hypothetical polysaccharide biosynthesi...    33   6.6  
UniRef50_Q93J49 Cluster: Putative uncharacterized protein SCO305...    33   8.7  
UniRef50_Q2CH46 Cluster: N-methylhydantoinase B; n=2; Rhodobacte...    33   8.7  
UniRef50_A6QSP4 Cluster: Putative uncharacterized protein; n=1; ...    33   8.7  

>UniRef50_UPI0000F20D13 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 250

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +3

Query: 492 LDFWVKCPCPGDPWYVVFTSNML 560
           LD  +  PCPGDP Y V+T NML
Sbjct: 227 LDVMMAPPCPGDPSYCVYTENML 249


>UniRef50_A4C8I2 Cluster: Hypothetical polysaccharide biosynthesis
           related protein; n=1; Pseudoalteromonas tunicata D2|Rep:
           Hypothetical polysaccharide biosynthesis related protein
           - Pseudoalteromonas tunicata D2
          Length = 426

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -3

Query: 760 SFVLFNGHKIMLIRVRCIPIFAYSEGSYLVKILILSNLVSGCNIAQSLILL-LLGYTAGE 584
           S V+FNG    L+ +  + IF+Y+  + L+ I+ +S + S C  +  LI + L    +  
Sbjct: 151 SSVIFNGFLSALLTIPLLFIFSYNSSNNLLLIIAISTITS-CIFSFILITIKLKKIKSAP 209

Query: 583 ARTHLVEESMLLVKTTYHGSP 521
           +  H   +   L+K T   +P
Sbjct: 210 STNHSTSDKSSLLKITKEATP 230


>UniRef50_Q93J49 Cluster: Putative uncharacterized protein SCO3054;
           n=1; Streptomyces coelicolor|Rep: Putative
           uncharacterized protein SCO3054 - Streptomyces
           coelicolor
          Length = 168

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = +1

Query: 406 TRRLRAASRQDMSSNYFCKIVQESALQCFWTFG*SARAPGTRGMWSSLATCSLRPNVSEP 585
           T R+ AA  Q + +  + ++    A  C W +    R+P  RG W S+  C  R  +   
Sbjct: 106 TARVAAAVAQALVAGTWSRLKACEAADCHWAY--YDRSPAGRGRWCSMQVCGARAKMRRY 163

Query: 586 RPR 594
           R +
Sbjct: 164 RAK 166


>UniRef50_Q2CH46 Cluster: N-methylhydantoinase B; n=2;
           Rhodobacteraceae|Rep: N-methylhydantoinase B -
           Oceanicola granulosus HTCC2516
          Length = 595

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
 Frame = +3

Query: 219 LPPGSGDWRADAGRTTASRVLT---AVHDAERTAE*YVGSFG 335
           +PPG+G++R   G   + RVLT     H++ER +E   G FG
Sbjct: 449 MPPGAGEYRGGIGVVKSQRVLTPAFITHESERHSEAPWGIFG 490


>UniRef50_A6QSP4 Cluster: Putative uncharacterized protein; n=1;
           Ajellomyces capsulatus NAm1|Rep: Putative
           uncharacterized protein - Ajellomyces capsulatus NAm1
          Length = 629

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +1

Query: 163 LLHCHII--IICYKPYNIVVSCLLAAVTGAPTPVGRRPVECSLLFTTRSVRRNSTWVAS 333
           ++ C ++  +I Y P N+     L   TGA T  G  P++ +LL T +   R S W A+
Sbjct: 32  IITCSLVASVILYAPGNMTYIDALLFATGATTQSGLNPIDTNLLLTYQQTPR-SEWPAA 89


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 797,701,042
Number of Sequences: 1657284
Number of extensions: 16208578
Number of successful extensions: 41155
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 39701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41149
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71734006925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)