Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D11
         (828 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.2  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   6.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   6.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.0  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 468 TRISLTMLLDFWVKC 512
           T   +  +LDFWV+C
Sbjct: 315 TTCDIATILDFWVRC 329


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 556 CSLRPNVSEPRPRYNPGAVG*AIAQYCNQKQGY 654
           C+ RP + EP+P           +Q+C +K GY
Sbjct: 92  CTSRPKLQEPQP-----------SQHCPRKHGY 113


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 145 RYVLFTLLHCHIIIICY 195
           R+ L+T++H  III  Y
Sbjct: 24  RFKLYTIVHIFIIIALY 40


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = +2

Query: 353 RVTIYYNSSVTLHRNPSIRDACERHHVRICHQTTSAKSYKNQPYN---AFGLLG 505
           R T+ + S + +  NPS+ +  +   +++ H+  +  +    P N   AF ++G
Sbjct: 596 RATLNWVSKLIIRSNPSLEEKLQIFALQLTHRAPTFTALGLFPINGSFAFTVVG 649


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 117 LLKSKSALV*VCTIYITTLSYYYNML 194
           L K  + L   C++ +  L+Y++N+L
Sbjct: 66  LAKITTILQRYCSVLLVFLTYFFNIL 91


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 117 LLKSKSALV*VCTIYITTLSYYYNML 194
           L K  + L   C++ +  L+Y++N+L
Sbjct: 62  LAKITTILQRYCSVLLVFLTYFFNIL 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,742
Number of Sequences: 336
Number of extensions: 4231
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)