Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_D10
(864 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012995-1|AAH12995.2| 417|Homo sapiens MTERF domain containing... 194 5e-49
AF132946-1|AAD27721.1| 327|Homo sapiens CGI-12 protein protein. 192 1e-48
BC053533-1|AAH53533.2| 381|Homo sapiens MTERF domain containing... 62 3e-09
EF206690-1|ABM92879.1| 383|Homo sapiens endoplasmic reticulum-l... 33 1.3
BC014014-1|AAH14014.1| 383|Homo sapiens ERGIC and golgi 3 protein. 33 1.3
BC009765-1|AAH09765.1| 383|Homo sapiens ERGIC and golgi 3 protein. 33 1.3
AL121586-19|CAI42845.1| 129|Homo sapiens ERGIC and golgi 3 prot... 33 1.3
AL121586-14|CAI42843.1| 396|Homo sapiens ERGIC and golgi 3 prot... 33 1.3
AL121586-13|CAB89412.1| 383|Homo sapiens ERGIC and golgi 3 prot... 33 1.3
AL121586-12|CAI42842.1| 388|Homo sapiens ERGIC and golgi 3 prot... 33 1.3
AK074550-1|BAC11054.1| 388|Homo sapiens protein ( Homo sapiens ... 33 1.3
AF151812-1|AAD34049.1| 383|Homo sapiens CGI-54 protein protein. 33 1.3
>BC012995-1|AAH12995.2| 417|Homo sapiens MTERF domain containing 1
protein.
Length = 417
Score = 194 bits (472), Expect = 5e-49
Identities = 94/207 (45%), Positives = 131/207 (63%)
Frame = -3
Query: 796 KDPMIFCEHLEDLKTRVNYLESKRFSDSEIKRIISKNPYWLNFSTIRIDRRFGFYQQYFD 617
K+ IF E LE+LKTRV YL SK FS +++ +++ K P+ LNFS R+D R GF+Q+ +
Sbjct: 211 KNHAIFSEDLENLKTRVAYLHSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELE 270
Query: 616 LSGKNVRCLATTQPKLITYNLHHVKCNTFAIKEEMGFKDEEIKMLLLNKPKLWMINQRML 437
LS K R L P+L+T +L VK N + E+GFK EI+ ++ PK+ N+ L
Sbjct: 271 LSVKKTRDLVVRLPRLLTGSLEPVKENMKVYRLELGFKHNEIQHMITRIPKMLTANKMKL 330
Query: 436 IERFNYIHNIMKIPHTTILENAGVLLSRVFRIKQRHLFLQSLGRAQYDPKKVNYVPIKAL 257
E F+++HN+M IPH I++ V +R+F++K+RHLFL LGRAQYDP K NY+ + L
Sbjct: 331 TETFDFVHNVMSIPHHIIVKFPQVFNTRLFKVKERHLFLTYLGRAQYDPAKPNYISLDKL 390
Query: 256 VEKTDVEFCNNFAKCDIDDFNMFLKTL 176
V D FC AK + DF FLKTL
Sbjct: 391 VSIPDEIFCEEIAKASVQDFEKFLKTL 417
>AF132946-1|AAD27721.1| 327|Homo sapiens CGI-12 protein protein.
Length = 327
Score = 192 bits (468), Expect = 1e-48
Identities = 93/207 (44%), Positives = 131/207 (63%)
Frame = -3
Query: 796 KDPMIFCEHLEDLKTRVNYLESKRFSDSEIKRIISKNPYWLNFSTIRIDRRFGFYQQYFD 617
K+ IF E LE+LKTRV YL SK FS +++ +++ K P+ LNFS R+D + GF+Q+ +
Sbjct: 121 KNHAIFSEDLENLKTRVAYLHSKNFSKADVAQMVRKAPFLLNFSVERLDNQIGFFQKELE 180
Query: 616 LSGKNVRCLATTQPKLITYNLHHVKCNTFAIKEEMGFKDEEIKMLLLNKPKLWMINQRML 437
LS K R L P+L+T +L VK N + E+GFK EI+ ++ PK+ N+ L
Sbjct: 181 LSVKKTRDLVVRLPRLLTGSLEPVKENMKVYRLELGFKHNEIQHMITRIPKMLTANKMKL 240
Query: 436 IERFNYIHNIMKIPHTTILENAGVLLSRVFRIKQRHLFLQSLGRAQYDPKKVNYVPIKAL 257
E F+++HN+M IPH I++ V +R+F++K+RHLFL LGRAQYDP K NY+ + L
Sbjct: 241 TETFDFVHNVMSIPHHIIVKFPQVFNTRLFKVKERHLFLTYLGRAQYDPAKPNYISLDKL 300
Query: 256 VEKTDVEFCNNFAKCDIDDFNMFLKTL 176
V D FC AK + DF FLKTL
Sbjct: 301 VSIPDEIFCEEIAKASVQDFEKFLKTL 327
>BC053533-1|AAH53533.2| 381|Homo sapiens MTERF domain containing 2
protein.
Length = 381
Score = 62.1 bits (144), Expect = 3e-09
Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 4/179 (2%)
Frame = -3
Query: 700 IISKNPYWLNFSTIRIDRRFGFYQQYFDLSGKNVRCLATTQPKLITYNLHHVKCNTFAIK 521
++ K+P L +++ +R + Q+ GK R L P++ T + +K
Sbjct: 144 VLKKSPQLLKLPIMQMRKRSSYLQKLGLGEGKLKRVLYCC-PEIFTMRQQDINDTVRLLK 202
Query: 520 EEMGFKDEEIKMLLLNKPKLWMINQRMLIERFNYIHNIMKIPHTTILENAGVLLSRVFRI 341
E+ F +++ +L + P + + L +F Y + M I H I+++ + S + +I
Sbjct: 203 EKCLFTVQQVTKILHSCPSVLREDLGQLEYKFQYAYFRMGIKHPDIVKSEYLQYS-LTKI 261
Query: 340 KQRHLFLQSLGRAQY-DPKKVNYVP---IKALVEKTDVEFCNNFAKCDIDDFNMFLKTL 176
KQRH++L+ LGR Q D K +P +K ++ ++ EF A+ +++F +F K L
Sbjct: 262 KQRHIYLERLGRYQTPDKKGQTQIPNPLLKDILRVSEAEFLARTARTSVEEFQVFKKLL 320
>EF206690-1|ABM92879.1| 383|Homo sapiens endoplasmic
reticulum-localized protein ERp43 protein.
Length = 383
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 72 FLVAGIFDALLSHSINAFENKLLLGKT 152
F VAG+ D+L+ HS A + K+ LGKT
Sbjct: 356 FTVAGLIDSLIYHSARAIQKKIDLGKT 382
>BC014014-1|AAH14014.1| 383|Homo sapiens ERGIC and golgi 3 protein.
Length = 383
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 72 FLVAGIFDALLSHSINAFENKLLLGKT 152
F VAG+ D+L+ HS A + K+ LGKT
Sbjct: 356 FTVAGLIDSLIYHSARAIQKKIDLGKT 382
>BC009765-1|AAH09765.1| 383|Homo sapiens ERGIC and golgi 3 protein.
Length = 383
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 72 FLVAGIFDALLSHSINAFENKLLLGKT 152
F VAG+ D+L+ HS A + K+ LGKT
Sbjct: 356 FTVAGLIDSLIYHSARAIQKKIDLGKT 382
>AL121586-19|CAI42845.1| 129|Homo sapiens ERGIC and golgi 3
protein.
Length = 129
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 72 FLVAGIFDALLSHSINAFENKLLLGKT 152
F VAG+ D+L+ HS A + K+ LGKT
Sbjct: 102 FTVAGLIDSLIYHSARAIQKKIDLGKT 128
>AL121586-14|CAI42843.1| 396|Homo sapiens ERGIC and golgi 3
protein.
Length = 396
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 72 FLVAGIFDALLSHSINAFENKLLLGKT 152
F VAG+ D+L+ HS A + K+ LGKT
Sbjct: 369 FTVAGLIDSLIYHSARAIQKKIDLGKT 395
>AL121586-13|CAB89412.1| 383|Homo sapiens ERGIC and golgi 3
protein.
Length = 383
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 72 FLVAGIFDALLSHSINAFENKLLLGKT 152
F VAG+ D+L+ HS A + K+ LGKT
Sbjct: 356 FTVAGLIDSLIYHSARAIQKKIDLGKT 382
>AL121586-12|CAI42842.1| 388|Homo sapiens ERGIC and golgi 3
protein.
Length = 388
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 72 FLVAGIFDALLSHSINAFENKLLLGKT 152
F VAG+ D+L+ HS A + K+ LGKT
Sbjct: 361 FTVAGLIDSLIYHSARAIQKKIDLGKT 387
>AK074550-1|BAC11054.1| 388|Homo sapiens protein ( Homo sapiens
cDNA FLJ90069 fis, clone HEMBA1003945, highly similar to
Serologically defined breast cancer antigen 84. ).
Length = 388
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 72 FLVAGIFDALLSHSINAFENKLLLGKT 152
F VAG+ D+L+ HS A + K+ LGKT
Sbjct: 361 FTVAGLIDSLIYHSARAIQKKIDLGKT 387
>AF151812-1|AAD34049.1| 383|Homo sapiens CGI-54 protein protein.
Length = 383
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 72 FLVAGIFDALLSHSINAFENKLLLGKT 152
F VAG+ D+L+ HS A + K+ LGKT
Sbjct: 356 FTVAGLIDSLIYHSARAIQKKIDLGKT 382
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,102,115
Number of Sequences: 237096
Number of extensions: 1998284
Number of successful extensions: 10768
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 10655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10767
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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