Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D10
         (864 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70750-10|CAA94746.1|  439|Caenorhabditis elegans Hypothetical p...   128   5e-30
Z81536-8|CAB04369.2|  352|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AL034488-1|CAA22455.1|  625|Caenorhabditis elegans Hypothetical ...    29   3.2  
AL032623-5|CAA21512.1|  533|Caenorhabditis elegans Hypothetical ...    28   9.9  

>Z70750-10|CAA94746.1|  439|Caenorhabditis elegans Hypothetical
           protein C50F4.12 protein.
          Length = 439

 Score =  128 bits (309), Expect = 5e-30
 Identities = 68/206 (33%), Positives = 117/206 (56%), Gaps = 2/206 (0%)
 Frame = -3

Query: 796 KDPMIFCEHLEDLKTRVNYLESKRFSDSEIKRIISKNPYWLNFSTIRIDRRFGFYQQYFD 617
           ++P    + + D++TR+NYLE K+F+ SE  +I+ +  YWLN +   ID R G+ QQ F 
Sbjct: 212 RNPFFLIQDVNDMQTRLNYLELKKFTKSERLKIVDEYRYWLNCNVQLIDSRLGWLQQQFK 271

Query: 616 LSGKNVRCLATTQPKLITYNLHHVKCNTFAIKEEMGFKDEEIKMLLLNKPKLWMINQRML 437
           LS K  R +   +P++I +    ++       +E+ F   ++KML++  P+++M++ +++
Sbjct: 272 LSAKATREIIVKEPRIIMFGTGPIERLVKMFNKELNFTTNQLKMLVMEDPRIFMMDSKLV 331

Query: 436 IERFNYIHNIMKIPHTTILENAGVLLSRVFRIKQRHLFLQSLGRAQYD--PKKVNYVPIK 263
            + + Y+ ++MKI + TILE+  +L   +  IK RH FL+ LGRA Y    KK + + I 
Sbjct: 332 SKTYKYVRDVMKINNETILEHPFILRCSLSVIKSRHDFLKRLGRANYQLAEKKESKIDIS 391

Query: 262 ALVEKTDVEFCNNFAKCDIDDFNMFL 185
              E TD E  +    CD+     FL
Sbjct: 392 ---EVTDPEGSSK-ESCDLVSLEHFL 413


>Z81536-8|CAB04369.2|  352|Caenorhabditis elegans Hypothetical
           protein F40D4.11 protein.
          Length = 352

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
 Frame = +3

Query: 45  PLVLSXAACFLVAGIFDA--LLSHSINAFENKLLLGKTG*--FIITVHKVFKNILKSSIS 212
           P +L+    F++  I+        S+N   + L L   G    IITVHK ++N +K  IS
Sbjct: 268 PFLLADTPVFIITVIYSTGYYTQKSMNLVIDILALHGIGEGIAIITVHKHYRNAVKHIIS 327

Query: 213 H-FAKLLQNSTSVFST 257
               KL++  TSV  T
Sbjct: 328 QCVGKLIKRDTSVRDT 343


>AL034488-1|CAA22455.1|  625|Caenorhabditis elegans Hypothetical
           protein Y54G11A.1 protein.
          Length = 625

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = -3

Query: 364 LLSRVFRIKQRHLFLQSLGRAQYDPKKVNYVPIKALVEKTDVEFCNNF 221
           LLS++ R       + ++ + ++  KK+   P+++ VEK +  F  NF
Sbjct: 560 LLSKMPRNSHNFYIIDTVRKIEFYRKKMRCAPLRSTVEKIEFYFLKNF 607


>AL032623-5|CAA21512.1|  533|Caenorhabditis elegans Hypothetical
           protein Y43F8B.4 protein.
          Length = 533

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 682 YWLNFSTIRIDRRFGFYQQYFDLSGKNVRCLATTQPKLITYNLH 551
           Y  NF T   D    F  + +D  GK +R  ++   +L+ Y LH
Sbjct: 13  YIFNFLTPFTDETLEFNDKIWDKCGKELRGDSSRDGRLVCYRLH 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,952,200
Number of Sequences: 27780
Number of extensions: 350454
Number of successful extensions: 848
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)