Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_D10
(864 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 25 1.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 25 1.2
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 24 1.6
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 23 3.6
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 23 3.6
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 23 3.6
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 23 4.8
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 23 4.8
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 4.8
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 4.8
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 4.8
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 4.8
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 4.8
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 4.8
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 4.8
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 4.8
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 23 4.8
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 23 4.8
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 22 8.4
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 22 8.4
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 649 YQF*LY*S*ANKGFCLLFVLF 711
Y F L S A GFCLLF++F
Sbjct: 440 YVFQLLDSYAVSGFCLLFLMF 460
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 649 YQF*LY*S*ANKGFCLLFVLF 711
Y F L S A GFCLLF++F
Sbjct: 493 YVFQLLDSYAVSGFCLLFLMF 513
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 24.2 bits (50), Expect = 1.6
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -3
Query: 658 RIDRRFGFYQQYFDLSGKNVRCLATTQPKLITYNLHHVKCNTFAIKEEMGFKD 500
+++R + Y Y D K++ +T+PK T V NT K++ + D
Sbjct: 449 QLNRMYKSYPNYIDKETKDMNLEISTRPKSNTVENACVLKNTEIFKDKSDWFD 501
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/31 (25%), Positives = 21/31 (67%)
Frame = -3
Query: 544 KCNTFAIKEEMGFKDEEIKMLLLNKPKLWMI 452
+C+ + K++ D+ ++ L+ NKP++W++
Sbjct: 74 ECSPCSEKQKK-IADKVVQFLIDNKPEIWVL 103
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = -3
Query: 775 EHLEDLKTRVNYLESKRFSDSEIKRIISKNPYWLNFSTIRIDR 647
+HL + L+ + +D +KR+I+ + W+ ++ I+ R
Sbjct: 124 KHLTQRINSCDLLKKRNENDPFLKRLITGDEKWVVYNNIKRKR 166
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/31 (25%), Positives = 21/31 (67%)
Frame = -3
Query: 544 KCNTFAIKEEMGFKDEEIKMLLLNKPKLWMI 452
+C+ + K++ D+ ++ L+ NKP++W++
Sbjct: 74 ECSPCSEKQKK-IADKVVQFLIDNKPEIWVL 103
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = -3
Query: 775 EHLEDLKTRVNYLESKRFSDSEIKRIISKNPYWLNFSTIRIDR 647
+HL + L+ + +D +KR+I+ + W+ ++ I+ R
Sbjct: 3 KHLTQRINSCDLLKKRSENDPFLKRLITGDEKWVVYNNIKRKR 45
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 22.6 bits (46), Expect = 4.8
Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Frame = -3
Query: 682 YWLNFSTIRIDRRFG---FYQQYFDLSGKNVRCLAT-TQPKLITYNLHHVKCNTFAIKEE 515
Y F I +D YF RC A + K + + C K+
Sbjct: 25 YTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNELKRVLPDALATDCKKCTDKQR 84
Query: 514 MGFKDEEIKMLLLNKPKLW 458
K + IK L+ NKP+LW
Sbjct: 85 EVIK-KVIKFLVENKPELW 102
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.8
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -2
Query: 419 YSQYNENSSHNNIRECW 369
Y+ YN N+++NN ++ +
Sbjct: 94 YNNYNNNNNYNNYKKLY 110
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 4.8
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -2
Query: 419 YSQYNENSSHNNIRECW 369
Y+ YN N+++NN ++ +
Sbjct: 94 YNNYNNNNNYNNYKKLY 110
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.8
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -2
Query: 419 YSQYNENSSHNNIRECW 369
Y+ YN N+++NN ++ +
Sbjct: 94 YNNYNNNNNYNNYKKLY 110
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.8
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -2
Query: 419 YSQYNENSSHNNIRECW 369
Y+ YN N+++NN ++ +
Sbjct: 94 YNNYNNNNNYNNYKKLY 110
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.8
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -2
Query: 419 YSQYNENSSHNNIRECW 369
Y+ YN N+++NN ++ +
Sbjct: 94 YNNYNNNNNYNNYKKLY 110
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.8
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -2
Query: 419 YSQYNENSSHNNIRECW 369
Y+ YN N+++NN ++ +
Sbjct: 94 YNNYNNNNNYNNYKKLY 110
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.8
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -2
Query: 419 YSQYNENSSHNNIRECW 369
Y+ YN N+++NN ++ +
Sbjct: 94 YNNYNNNNNYNNYKKLY 110
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.8
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -2
Query: 419 YSQYNENSSHNNIRECW 369
Y+ YN N+++NN ++ +
Sbjct: 94 YNNYNNNNNYNNYKKLY 110
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 22.6 bits (46), Expect = 4.8
Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Frame = -3
Query: 682 YWLNFSTIRIDRRFG---FYQQYFDLSGKNVRCLAT-TQPKLITYNLHHVKCNTFAIKEE 515
Y F I +D YF RC A + K + + C K+
Sbjct: 25 YTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNELKRVLPDALATDCKKCTDKQR 84
Query: 514 MGFKDEEIKMLLLNKPKLW 458
K + IK L+ NKP+LW
Sbjct: 85 EVIK-KVIKFLVENKPELW 102
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 22.6 bits (46), Expect = 4.8
Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Frame = -3
Query: 682 YWLNFSTIRIDRRFG---FYQQYFDLSGKNVRCLAT-TQPKLITYNLHHVKCNTFAIKEE 515
Y F I +D YF RC A + K + + C K+
Sbjct: 25 YTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNELKRVLPDALATDCKKCTDKQR 84
Query: 514 MGFKDEEIKMLLLNKPKLW 458
K + IK L+ NKP+LW
Sbjct: 85 EVIK-KVIKFLVENKPELW 102
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 66 ACFLVAGIFDALLSHSINAFE 128
AC L+ +FD + +H N F+
Sbjct: 44 ACILIKDLFDNVHNHIQNIFK 64
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 66 ACFLVAGIFDALLSHSINAFE 128
AC L+ +FD + +H N F+
Sbjct: 27 ACILIKDLFDNVHNHIQNIFK 47
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,666
Number of Sequences: 438
Number of extensions: 4322
Number of successful extensions: 28
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -