Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D09
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    97   9e-23
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   4.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   4.0  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   5.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.1  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   9.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.1  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 97.5 bits (232), Expect = 9e-23
 Identities = 56/202 (27%), Positives = 98/202 (48%)
 Frame = -3

Query: 654 KQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXXXXX 475
           +Q +M SAT  +E++ +  KF+ + + + V          ++Q +               
Sbjct: 345 RQTLMFSATFPEEVQQLAGKFLLNYIFIAVGIVGSA-CTDVEQKFFQVSKFDKRSKLVSI 403

Query: 474 LDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRIL 295
           L+     + +IFV++ +    LA  L++QN  +  IH +  Q ER      FK   +++L
Sbjct: 404 LEKAPNERTLIFVETKRNADFLATFLSEQNIQSTSIHGDRYQSEREKALLDFKTGHRKVL 463

Query: 294 VATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILN 115
           VAT +  RG+DI+ V  V NYD+P+  D Y+HR+ R GR G KG A +   ++ D  + +
Sbjct: 464 VATGVAARGLDIKDVQHVINYDLPKSIDEYVHRIGRTGRVGNKGKATSFFDEDQDRNLAS 523

Query: 114 QVQDRFDVNITELPEEIELSTY 49
            +         E+PE +   +Y
Sbjct: 524 DLAKILSQAKQEIPEWLGSKSY 545


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory
          receptor candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 31 NLSSFDVGRELNFFRQLCNV 90
          N S  D+ R L+FF ++CN+
Sbjct: 5  NYSKKDI-RSLSFFYKICNI 23


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory
          receptor candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 31 NLSSFDVGRELNFFRQLCNV 90
          N S  D+ R L+FF ++CN+
Sbjct: 5  NYSKKDI-RSLSFFYKICNI 23


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 16/45 (35%), Positives = 18/45 (40%)
 Frame = +2

Query: 122 ILASFSSDIIVMARPLVPNLPARATRCRYVSESSGMS*LKTMFTL 256
           IL SFS       RP     P       YV   S +S +K  FTL
Sbjct: 44  ILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTL 88


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 345 HPGSYFCGYQWQGSSGQ*AVVP 410
           HP     GY + G  G+ A +P
Sbjct: 385 HPNYNHYGYHYSGDGGEVAHLP 406


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -3

Query: 312 FQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAG 181
           F  +ILVA N F   ++I+ + +    ++     T +  VA  G
Sbjct: 247 FVIKILVALNFFTSTLEIDNLYLKHKLEISSLVQTAITLVAMCG 290


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 345 HPGSYFCGYQWQGSSGQ*AVVP 410
           HP     GY + G  G+ A +P
Sbjct: 333 HPNYNHYGYHYSGDGGEVAHLP 354


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,355
Number of Sequences: 336
Number of extensions: 3348
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)