Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_D09
(668 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 279 2e-76
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 132 6e-32
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 128 9e-31
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 120 2e-28
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 101 9e-23
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 101 1e-22
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 97 2e-21
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 91 2e-19
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 87 2e-18
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 86 4e-18
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 85 9e-18
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 79 6e-16
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 78 1e-15
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 77 2e-15
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 77 2e-15
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 68 1e-12
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 67 2e-12
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 64 1e-11
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 63 3e-11
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 63 4e-11
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 62 7e-11
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 58 2e-09
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 49 7e-07
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 46 5e-06
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 46 5e-06
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 44 2e-05
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 35 0.009
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 35 0.009
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 34 0.016
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 30 0.26
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 30 0.26
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 29 0.80
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 27 3.2
SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces p... 26 4.3
SPBC2G2.08 |ade9||C-1-tetrahydrofolatesynthase/methylenetetrahyd... 26 4.3
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 25 7.5
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 25 9.9
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 279 bits (685), Expect = 2e-76
Identities = 133/207 (64%), Positives = 161/207 (77%)
Frame = -3
Query: 666 TPHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXX 487
TP KQVMM SATLS EIRP+CKKFMQ+P+E+YVDDE KL HGLQQHYV
Sbjct: 226 TPPQKQVMMFSATLSNEIRPICKKFMQNPLEIYVDDETKLTLHGLQQHYVKLEEKAKNRK 285
Query: 486 XXXXLDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQ 307
LD LEFNQVVIFVKSV R L +LL + NFP+I IH + Q+ER+ RY+ FKDF
Sbjct: 286 INDLLDSLEFNQVVIFVKSVSRANELDRLLRECNFPSICIHGGLPQEERIKRYKAFKDFD 345
Query: 306 KRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDA 127
KRI VAT++FGRG+DIERVNIV NYDMP+ D+YLHRV RAGRFGTKGLAIT S E D+
Sbjct: 346 KRICVATDVFGRGIDIERVNIVINYDMPDSPDSYLHRVGRAGRFGTKGLAITFSSSEEDS 405
Query: 126 KILNQVQDRFDVNITELPEEIELSTYI 46
+IL+++Q+RF+VNITELP+EI++ +Y+
Sbjct: 406 QILDKIQERFEVNITELPDEIDVGSYM 432
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 132 bits (318), Expect = 6e-32
Identities = 66/201 (32%), Positives = 115/201 (57%), Gaps = 1/201 (0%)
Frame = -3
Query: 663 PHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXX 484
P G QV++ SATL +++ + KF +P+ + V + +L GL+Q+++
Sbjct: 192 PPGTQVVVVSATLPQDVLEMTNKFTTNPVRILVKRD-ELTLEGLKQYFIAVEKEEWKFDT 250
Query: 483 XXXL-DVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQ 307
L D L Q VIF S ++ L + + + NF +H M Q ER + Q F+
Sbjct: 251 LCDLYDTLTITQAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGN 310
Query: 306 KRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDA 127
R+L+ T+++ RG+D+++V++V NYD+P + + Y+HR+ R+GRFG KG+AI +++E D
Sbjct: 311 SRVLICTDIWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTNE-DV 369
Query: 126 KILNQVQDRFDVNITELPEEI 64
+IL ++ + I E+P I
Sbjct: 370 RILRDIEQYYSTVIDEMPMNI 390
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 128 bits (308), Expect = 9e-31
Identities = 62/201 (30%), Positives = 119/201 (59%), Gaps = 1/201 (0%)
Frame = -3
Query: 663 PHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXX 484
P QV++ SAT+ +++ V KFM+DP+ + V + +L G++Q YV
Sbjct: 190 PPTAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKD-ELTLEGIKQFYVAVEKEEWKLDT 248
Query: 483 XXXL-DVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQ 307
L + + Q VIF + ++ L + LT+++F +H +M Q +R + +F+
Sbjct: 249 LCDLYETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGS 308
Query: 306 KRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDA 127
RIL+ T+L RG+D+++V++V NYD+P + + Y+HR+ R GRFG KG++I ++++ D
Sbjct: 309 SRILITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTND-DV 367
Query: 126 KILNQVQDRFDVNITELPEEI 64
+++ +++ ++ +I E+P I
Sbjct: 368 RMMREIEQFYNTHIEEMPMNI 388
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 120 bits (289), Expect = 2e-28
Identities = 66/206 (32%), Positives = 107/206 (51%)
Frame = -3
Query: 663 PHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXX 484
P +Q+ + SAT ++ K + P E+ + DE L+ G+ Q+Y
Sbjct: 215 PKNRQISLYSATFPLIVKNFMDKHLNKPYEINLMDELTLR--GVTQYYAFVDESQKVHCL 272
Query: 483 XXXLDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQK 304
L+ NQ +IF S R LA+ +T+ + H M Q R + F++
Sbjct: 273 NTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQSHRNRVFHNFRNGVC 332
Query: 303 RILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAK 124
R LV ++L RG+DI+ VN+V N+D P++++TYLHR+ R+GRFG +GLAI+ IS D
Sbjct: 333 RNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHRGLAISFIS-WADRF 391
Query: 123 ILNQVQDRFDVNITELPEEIELSTYI 46
L ++++ I +P I+ S Y+
Sbjct: 392 NLYRIENELGTEIQPIPPSIDPSLYV 417
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 101 bits (242), Expect = 9e-23
Identities = 54/174 (31%), Positives = 90/174 (51%)
Frame = -3
Query: 663 PHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXX 484
PH ++ ++ SAT++ ++ + + + P+ V V + L Q Y+
Sbjct: 218 PHERRTLLFSATMTSKVEKLQRASLHQPVRVAVSSKFST-VDTLIQRYLFFPFKHKDTYL 276
Query: 483 XXXLDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQK 304
++ L N ++IF ++V LA LL F AI +H ++Q RL +FK +
Sbjct: 277 VYLVNELAGNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGAR 336
Query: 303 RILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMIS 142
LVAT++ RG+DI V++V NYD+P DS Y+HRV R R G G +I +++
Sbjct: 337 STLVATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIALVT 390
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 101 bits (241), Expect = 1e-22
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 7/206 (3%)
Frame = -3
Query: 663 PHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXX 484
P Q+++ SAT S+ + ++F + E+ + E +L G++Q Y+
Sbjct: 284 PRNTQIVLFSATFSERVEKYAERFAPNANEIRLKTE-ELSVEGIKQLYMDCQSEEHKYNV 342
Query: 483 XXXL-DVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQ 307
L +L Q +IF K +A+ +T + N+ +R + F+
Sbjct: 343 LVELYGLLTIGQSIIFCKKKDTAEEIARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGT 402
Query: 306 KRILVATNLFGRGMDIERVNIVFNYDMP------EDSDTYLHRVARAGRFGTKGLAITMI 145
++LV TN+ RG+D+ +VN+V NYDMP D TYLHR+ R GRFG G++I +
Sbjct: 403 SKVLVTTNVIARGIDVSQVNLVVNYDMPLDQAGRPDPQTYLHRIGRTGRFGRVGVSINFV 462
Query: 144 SDENDAKILNQVQDRFDVNITELPEE 67
D+ + +N +Q+ F IT +P +
Sbjct: 463 HDKKSWEEMNAIQEYFQRPITRVPTD 488
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 97.1 bits (231), Expect = 2e-21
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 3/208 (1%)
Frame = -3
Query: 654 KQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHY-VXXXXXXXXXXXXX 478
+Q +M SAT KE++ + + ++ D ++V V H ++Q V
Sbjct: 301 RQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKD 360
Query: 477 XLDVLEF--NQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQK 304
+VL+ N+V+IF + + + + L +PA+ IH + QDER +F+ +
Sbjct: 361 IEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKS 420
Query: 303 RILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAK 124
I+VAT++ RG+D++ + VFNYD P +++ Y+HR+ R GR G KG A T + +N +
Sbjct: 421 PIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQ 480
Query: 123 ILNQVQDRFDVNITELPEEIELSTYIEG 40
V + P+ E++ Y G
Sbjct: 481 ARELVSILSEAKQDIDPKLEEMARYSSG 508
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 90.6 bits (215), Expect = 2e-19
Identities = 52/174 (29%), Positives = 83/174 (47%)
Frame = -3
Query: 654 KQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXXXXX 475
+Q +M SAT ++I+ + + F++D + + V + Q+
Sbjct: 365 RQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSEKRSYLLDIL 424
Query: 474 LDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRIL 295
+ +IFV++ + L L + NFPA IH + TQ ER + F+ + I+
Sbjct: 425 HTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIM 484
Query: 294 VATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDEN 133
VAT + RG+DI V V NYD+P D D Y+HR+ R GR G G A+ + N
Sbjct: 485 VATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNN 538
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 87.0 bits (206), Expect = 2e-18
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 3/199 (1%)
Frame = -3
Query: 663 PHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXX 484
P +Q M+ SAT++ ++ + + + P+ V+VD++ K L Q +V
Sbjct: 434 PKSRQTMLFSATMTDKVDDLIRLSLNRPVRVFVDNK-KTTAKLLTQEFVRVRPQRELLRP 492
Query: 483 XXXLDV---LEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKD 313
+ + L + +IF +S + + + A IH +++Q++R+ + F+D
Sbjct: 493 AMLIYLCKELFHRRTIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQEQRVRALEDFRD 552
Query: 312 FQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDEN 133
+ L+AT++ RG+DI+ + +V NY+ P + YLHRV R R G G AIT ++ E
Sbjct: 553 GKCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLHRVGRTARAGRSGRAIT-LAGEG 611
Query: 132 DAKILNQVQDRFDVNITEL 76
D K+L V T+L
Sbjct: 612 DRKVLKGVFKNSSAQNTKL 630
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 86.2 bits (204), Expect = 4e-18
Identities = 55/198 (27%), Positives = 99/198 (50%), Gaps = 6/198 (3%)
Frame = -3
Query: 654 KQVMMXSATLSKEIRPVC---KKFMQDPMEVY-VDDEAKLKXHGLQQHYVXXXXXXXXXX 487
+Q ++ +AT++ IR + +K + P+ +Y V+ + LQQ Y+
Sbjct: 187 RQTLLFTATVTDAIRQLKYQPQKNNKPPLWLYEVETDNISVPSTLQQSYIFVSSQVREAY 246
Query: 486 XXXXLDVLEF--NQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKD 313
L + E +IFV + + +L +H M Q ER++ +F+
Sbjct: 247 LVHLLTIPENAKKSAIIFVNRTRTAELIYSILRLLELRVTELHSEMVQRERINSLGRFRA 306
Query: 312 FQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDEN 133
+ILVAT++ RG+DI V +V N+D+P D D Y+HRV R R G G +I++++ E
Sbjct: 307 EAAKILVATDVASRGLDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRSGESISIVT-ER 365
Query: 132 DAKILNQVQDRFDVNITE 79
D +++ ++DR ++E
Sbjct: 366 DVDLVHAIEDRVGTKLSE 383
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 85.0 bits (201), Expect = 9e-18
Identities = 49/175 (28%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
Frame = -3
Query: 654 KQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXXXXX 475
+Q +M SATL + + K ++ +P+ + + + + Q+ +
Sbjct: 450 RQTIMFSATLPPRVANLAKSYLIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVEEI 509
Query: 474 LDVLEFNQ-VVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRI 298
L+ F+ ++IFV + A+A+ L + A+ +H + +Q++R +Q ++ I
Sbjct: 510 LESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTADI 569
Query: 297 LVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDEN 133
LVAT++ GRG+DI V++V NY+M + + Y HR+ R GR G G AIT + E+
Sbjct: 570 LVATDIAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPED 624
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 79.0 bits (186), Expect = 6e-16
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 4/202 (1%)
Frame = -3
Query: 654 KQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXXXXX 475
+Q ++ SAT + + + +K ++ P+E+ V + + ++Q
Sbjct: 600 RQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASE-VEQIVEVRPEESKFSRLLEL 658
Query: 474 LDVLEFNQV----VIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQ 307
L L NQ+ ++FV + AL L + + + IH Q +R S +K
Sbjct: 659 LGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGV 718
Query: 306 KRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDA 127
+L+AT++ RG+D++ + +V NYD P + Y+HRV R GR G G+A+T I+ E +
Sbjct: 719 FDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQE- 777
Query: 126 KILNQVQDRFDVNITELPEEIE 61
K + ++ +P+E++
Sbjct: 778 KYAVDIAKALKMSKQPVPKELQ 799
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 78.2 bits (184), Expect = 1e-15
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Frame = -3
Query: 654 KQVMMXSATLSKEIRPVCKKFMQD-PMEVYVDD-EAKLKXHGLQQHYVXXXXXXXXXXXX 481
+Q ++ SAT + ++ + + ++ P+ V VD + GL+Q YV
Sbjct: 269 RQTLLFSATQTTKVEDLARISLKPGPLYVNVDSGKPTSTVEGLEQGYVVVDSDKRFLLLF 328
Query: 480 XXLDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKR 301
L +V++F+ S +A+LL + P + +H Q R + + +F + +K
Sbjct: 329 SFLKRNLKKKVIVFMSSCASVKYMAELLNYIDLPVLDLHGKQKQQRRTNTFFEFCNAEKG 388
Query: 300 ILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKG 163
IL+ TN+ RG+DI V+ + YD P+D Y+HRV R R GTKG
Sbjct: 389 ILLCTNVAARGLDIPAVDWIVQYDPPDDPRDYIHRVGRTAR-GTKG 433
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 77.4 bits (182), Expect = 2e-15
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Frame = -3
Query: 453 QVVIFVKSVQRCIAL-AQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLF 277
+VVIFV+ ++R AL +LL D+ + IH + Q +R +F+ + +L+AT+L
Sbjct: 290 RVVIFVQDIERAKALYTELLFDEIHVGV-IHGELPQAKREEALAKFRKGEIWVLIATDLL 348
Query: 276 GRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDEN 133
RG+D V +V N+D P+ +Y+HR+ R GR G G A+T + E+
Sbjct: 349 ARGIDFHGVKMVINFDFPQSVHSYIHRIGRTGRAGNTGQAVTFFTKED 396
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 77.0 bits (181), Expect = 2e-15
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 8/182 (4%)
Frame = -3
Query: 654 KQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXXXXX 475
+Q + SAT + +R + F++DP+++ + + + Q +
Sbjct: 346 RQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNITQ--IVEILDDPRSKERML 403
Query: 474 LDVL--------EFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQF 319
++L + ++++IFV + + L + + +GIH +M+Q RL F
Sbjct: 404 DNLLRKHLSSGGKDDKILIFVLYKKEAARVEGTLA-RKYNVVGIHGDMSQGARLQALNDF 462
Query: 318 KDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISD 139
K + +LVAT++ RG+DI +V +V N P + Y+HR+ R GR TKG AIT +
Sbjct: 463 KSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRTGRANTKGTAITFFTP 522
Query: 138 EN 133
++
Sbjct: 523 QD 524
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 67.7 bits (158), Expect = 1e-12
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Frame = -3
Query: 465 LEFNQVVIFVKSVQRCIALAQLLTDQNFP--AIGIHRNMTQDERLSRYQQFKDFQKR-IL 295
+E+ + ++F S L P + +H Q R +++FK K+ +L
Sbjct: 254 IEYEKAIVFFSSCASVEYFNSLFLTYKLPFEIVALHGQQVQSNRSRNFEKFKKSNKKTVL 313
Query: 294 VATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILN 115
T++ RG+DI V+ V D P D ++ HR RAGR G G+AI +++D + +
Sbjct: 314 FTTDIASRGLDIPNVDFVLQLDPPLDPKSFSHRCGRAGRAGRAGVAIVLLNDGREEEYEE 373
Query: 114 QVQDRFDVNITELPEEIE 61
++ R V IT + IE
Sbjct: 374 LLRVR-KVPITRIDTPIE 390
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 66.9 bits (156), Expect = 2e-12
Identities = 30/102 (29%), Positives = 54/102 (52%)
Frame = -3
Query: 453 QVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFG 274
+ ++F ++ + L + P+ +H + Q +RL ++FK+ K +LV T++
Sbjct: 391 KTMVFANGIEDIKRITPFLNELKVPSYPLHAQLDQKKRLQSLEKFKNNPKGVLVCTDVAA 450
Query: 273 RGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITM 148
RG+DI V V +Y +P +D Y+HR R R G++I M
Sbjct: 451 RGIDIPSVTHVIHYHVPHTADMYVHRSGRTARANEDGVSILM 492
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 64.5 bits (150), Expect = 1e-11
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 5/184 (2%)
Frame = -3
Query: 663 PHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYV-DDEAKLKXHGLQQHYVXXXXXXXXXX 487
P +Q M+ SAT +K ++ + + +Q+P + V +++ L Q Y+
Sbjct: 214 PVHRQTMLFSATQTKSVKDLARLSLQNPDFISVHENDTSSTPSNLNQFYLTVPLTEKLDI 273
Query: 486 XXXXLDV-LEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGI---HRNMTQDERLSRYQQF 319
+ L+F + ++F+ S ++ + + P I + H Q R +F
Sbjct: 274 LFGFIRTHLKF-KTIVFLSSCKQVRFVYETFRRMR-PGISLLHLHGKQKQTTRTEVTAKF 331
Query: 318 KDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISD 139
+ +L T++ RG+D V+ V D PED DTY+HRV R R+ G A+ ++
Sbjct: 332 TSSRHVVLFCTDIVARGLDFPAVDWVIQLDAPEDVDTYIHRVGRTARYNRSGNALLLLLP 391
Query: 138 ENDA 127
+A
Sbjct: 392 SEEA 395
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 63.3 bits (147), Expect = 3e-11
Identities = 31/114 (27%), Positives = 59/114 (51%)
Frame = -3
Query: 456 NQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLF 277
+ ++FV + +++LL + I+ ++ Q+ RL+ F+ + +LV T++
Sbjct: 347 DSTLVFVPTKHHVEYVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVA 406
Query: 276 GRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILN 115
RG+DI + V NYD P ++HRV R R G G A +++ E+ +L+
Sbjct: 407 SRGIDIPLLANVINYDFPPQPKVFVHRVGRTARAGRTGWAYSLVRAEDAGYLLD 460
Score = 30.7 bits (66), Expect = 0.20
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -3
Query: 663 PHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKL 547
P +Q ++ SATL + + K +QDP+ V +D E+K+
Sbjct: 242 PTSRQTLLFSATLPRTLVDFAKAGLQDPVLVRLDVESKV 280
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 62.9 bits (146), Expect = 4e-11
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Frame = -3
Query: 369 IHRNMTQDERLSRYQQF---KDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLH 199
+H +++Q R S F +D IL+ T++ RG+D+ V++V YD P +D YLH
Sbjct: 473 LHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDDYLH 532
Query: 198 RVARAGRFGTKGLAITMISDENDAKILNQVQDRFDVNITELP 73
R+ R R G G AI + + +++ +N ++ NI E P
Sbjct: 533 RIGRTARAGHNGAAIMFLLPK-ESEYINLLKSSVSANILEQP 573
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 62.1 bits (144), Expect = 7e-11
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = -3
Query: 456 NQVVIFVKSVQRCIALAQLLTDQ-NFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNL 280
+++++F+ ++ + +L + P +H +T +R S + F+ Q IL AT++
Sbjct: 293 SRIIVFLPTISMVDFVGGVLENHLKIPCFILHSGLTTAQRRSITESFRKCQSGILFATDV 352
Query: 279 FGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILNQVQ 106
RGMD + V P ++D Y+HR+ R GR G G A +I E + LN ++
Sbjct: 353 VARGMDFPNITQVVQITGPSNTDDYIHRIGRTGRAGKTGEAY-LILLEQEKPFLNSIK 409
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 57.6 bits (133), Expect = 2e-09
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Frame = -3
Query: 450 VVIFVKSVQRCIALAQLLT------DQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVA 289
++ FVKS + L +LL +Q+F ++++DER +F +LV
Sbjct: 434 ILCFVKSNEAAARLHRLLELIHESLNQSFSCGLFTSSLSRDERKKIISRFATGDLNLLVC 493
Query: 288 TNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMI 145
++L RG+D+ V NYD P +Y+HR+ R R G +G A T++
Sbjct: 494 SDLMARGIDVANTQNVINYDPPLSVRSYVHRIGRTARAGREGFAWTLV 541
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 48.8 bits (111), Expect = 7e-07
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = -3
Query: 348 DERLSRYQQFKDFQKRILVATNLFG--RGMDIERVNIVFNYDMPEDSDTYLHRVARAGRF 175
DE + + K +K+ + +G RG+D E V V N+DMP ++ +Y+HR+ R R
Sbjct: 361 DESILAAAKDKSKKKKRVKQDKEYGVARGLDFENVACVLNFDMPSNTKSYIHRIGRTARA 420
Query: 174 GTKGLAITMISDEND 130
G G A++ + +++
Sbjct: 421 GKPGTAMSFVVPKSE 435
Score = 41.9 bits (94), Expect = 8e-05
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 2/140 (1%)
Frame = -3
Query: 663 PHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDD-EAKLKXHGLQQHYVXXXXXXXXXX 487
P G Q + SATLSK I + K ++P + V D EA K L Q+ V
Sbjct: 193 PRGTQSFLMSATLSKNIASLQKLVCRNPFILAVKDKEASGK---LTQYVVKCSEQDKFLL 249
Query: 486 XXXXLDV-LEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDF 310
L + L +++IFV + RC L L ++ ++ + + RL +Q+
Sbjct: 250 AYILLKLRLIKGKILIFVNEINRCYRLKLFLEQFGLKSLVLNSELPVNSRLHILEQYNKG 309
Query: 309 QKRILVATNLFGRGMDIERV 250
+I++AT+ G +IE +
Sbjct: 310 LYQIIIATDESGMMGEIEEL 329
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 46.0 bits (104), Expect = 5e-06
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = -3
Query: 360 NMTQDERLSRYQQFKDF--QKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVAR 187
+++ +ER + F++ + RI++AT FG G++ V +V +Y +P S Y+ R
Sbjct: 1452 DVSDEERQMNFDAFRNANGKTRIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGR 1511
Query: 186 AGRFGTKGLAITMISDENDAKILNQVQD 103
AGR G +A + ++ D+ + V+D
Sbjct: 1512 AGRDGKYAIA-ALFYEKYDSTWSSYVED 1538
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 46.0 bits (104), Expect = 5e-06
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = -3
Query: 360 NMTQDERLSRYQQFKDF--QKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVAR 187
+++ +ER + F++ + RI++AT FG G++ V +V +Y +P S Y+ R
Sbjct: 1452 DVSDEERQMNFDAFRNANGKTRIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGR 1511
Query: 186 AGRFGTKGLAITMISDENDAKILNQVQD 103
AGR G +A + ++ D+ + V+D
Sbjct: 1512 AGRDGKYAIA-ALFYEKYDSTWSSYVED 1538
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 44.0 bits (99), Expect = 2e-05
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = -3
Query: 447 VIFVKSVQRCIALA-QLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGR 271
+I+ S C +A +L D A H + + ER +++ +I+VAT FG
Sbjct: 746 IIYCLSRTSCEQVAAKLRNDYGLKAWHYHAGLEKVERQRIQNEWQSGSYKIIVATIAFGM 805
Query: 270 GMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMIS 142
G+D V V ++ P+ + Y RAGR G I S
Sbjct: 806 GVDKGDVRFVIHHSFPKSLEGYYQETGRAGRDGKPAHCIMFYS 848
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 35.1 bits (77), Expect = 0.009
Identities = 28/129 (21%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Frame = -3
Query: 456 NQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRI---LVAT 286
++ ++F + Q + L +N+ + + + D+R S QF D + + +++T
Sbjct: 1204 HKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLST 1263
Query: 285 NLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFG-TKGLAITMISDEN--DAKILN 115
G G++++ + V +D + L RA R G TK + I + E + IL+
Sbjct: 1264 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSIEENILS 1323
Query: 114 QVQDRFDVN 88
+ Q + D++
Sbjct: 1324 RAQYKLDLD 1332
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 35.1 bits (77), Expect = 0.009
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = -3
Query: 357 MTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 178
M+Q + +QF+ + L+AT++ G+DI V+++ YD L R+ R GR
Sbjct: 476 MSQKLQNETVKQFQKGEVNTLIATSIGEEGLDIGEVDMIICYDASASPIRMLQRMGRTGR 535
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 34.3 bits (75), Expect = 0.016
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = -3
Query: 357 MTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 178
M Q ++ QF+ LVAT++ G+DI +++ YD + R+ R GR
Sbjct: 515 MNQMQQKETIDQFRAGVINTLVATSIGEEGLDIGDTDMIICYDASSSPIRTIQRMGRTGR 574
Query: 177 FGTKGLAITMISDENDAK 124
+ + + + D D+K
Sbjct: 575 KKSGKVFVLLTEDCEDSK 592
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 30.3 bits (65), Expect = 0.26
Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Frame = -3
Query: 453 QVVIFVKSVQRCIALAQLLTDQNFPAIGIHR------------NMTQDERLSRYQQFKDF 310
+ VIFV+ L+ + N P I H +MT + +FK
Sbjct: 363 RTVIFVERKATAFTLSLFMKTLNLPNIRAHSFIGHGPSDQGEFSMTFRRQKDTLHKFKTG 422
Query: 309 QKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGL 160
+ +L+AT + G+D+ N+V +++ Y+ RA +K L
Sbjct: 423 KYNVLIATAVAEEGIDVPSCNLVIRFNICRTVTQYVQSRGRARAMASKFL 472
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 30.3 bits (65), Expect = 0.26
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = -2
Query: 391 PELPCHWYPQKY-DPG*ASLPLS---TIQGLPKKDLGCNKLIWPRNGH 260
P++P HWYP P P+S I LPK + N+L P + H
Sbjct: 159 PQVPSHWYPVSLPSPNLPHQPISKPPVIPNLPKLQVHPNRLPHPIHNH 206
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 28.7 bits (61), Expect = 0.80
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -3
Query: 297 LVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMI 145
++ATN G+DI ++ V P + RAGR LA+ ++
Sbjct: 614 IIATNALELGIDIGSLDAVITIGFPYSLSNLRQQFGRAGRRNKSSLAVYIV 664
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 26.6 bits (56), Expect = 3.2
Identities = 24/125 (19%), Positives = 51/125 (40%), Gaps = 6/125 (4%)
Frame = -3
Query: 456 NQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRI---LVAT 286
+++++F + +Q+ L +N ++ ER S F + L++T
Sbjct: 888 HRILLFSQFIQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCFLLST 947
Query: 285 NLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMI---SDENDAKILN 115
G G+++ + V D + + +ARA R+G K + + D + KI+
Sbjct: 948 RAGGVGINLASADTVIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSVEEKIIQ 1007
Query: 114 QVQDR 100
Q +
Sbjct: 1008 NAQKK 1012
>SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1098
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 134 FSSDIIVMARPLVPNLPAR 190
+S+DI + A PLVP+LP +
Sbjct: 706 YSTDIPLKAEPLVPDLPVK 724
>SPBC2G2.08 |ade9||C-1-
tetrahydrofolatesynthase/methylenetetrahydrofolatedehydr
ogenase/methylenetetrahydrofolatecyclohydrolase/formylte
trahydrofolatesynthetase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 969
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 124 LGIIFIRYHSNGQTFGTKPSCAG 192
LGI +R S G TFG K AG
Sbjct: 425 LGIACVRQPSQGPTFGVKGGAAG 447
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 25.4 bits (53), Expect = 7.5
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 256 FNVHSSAK*VCCNQDPFLEVLELLIAGETLILGHISVDTNGREVLVS--EQLCQSYAALY 429
F++ S + + F + L +L+ ++ + V E+L + EQ + Y AL
Sbjct: 580 FSLSPSTRGIILCISGFTDKLHVLLEKVVAMMRDLKVHPQRFEILKNRLEQELKDYDALE 639
Query: 430 *FHKNNHLI 456
+H++NH++
Sbjct: 640 AYHRSNHVL 648
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -3
Query: 144 SDENDAKILNQVQDRFDVNITELP 73
S E+D + L ++ D DV++++LP
Sbjct: 160 SQESDTESLPEINDSSDVSLSDLP 183
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,681,284
Number of Sequences: 5004
Number of extensions: 54038
Number of successful extensions: 168
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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