Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_D09
(668 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 279 2e-75
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 162 2e-40
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 136 2e-32
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 136 2e-32
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 2e-31
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 102 2e-22
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 97 1e-20
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 97 1e-20
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 3e-20
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 93 1e-19
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 4e-17
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017) 77 1e-14
SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017) 77 1e-14
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 69 3e-12
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 65 6e-11
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 62 5e-10
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 60 1e-09
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 59 4e-09
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 59 4e-09
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 54 8e-08
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 50 1e-06
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 48 7e-06
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 44 1e-04
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 41 8e-04
SB_59278| Best HMM Match : Helicase_C (HMM E-Value=0.00034) 41 0.001
SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18) 41 0.001
SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20) 40 0.002
SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27) 39 0.004
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 36 0.030
SB_9751| Best HMM Match : Helicase_C (HMM E-Value=3.4e-05) 36 0.039
SB_58648| Best HMM Match : Helicase_C (HMM E-Value=2.2e-14) 33 0.16
SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 33 0.21
SB_1038| Best HMM Match : Helicase_C (HMM E-Value=1.1e-10) 32 0.37
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_7386| Best HMM Match : Helicase_C (HMM E-Value=0.086) 30 1.5
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 30 2.0
SB_16592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_26006| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_1639| Best HMM Match : VWA (HMM E-Value=0) 29 3.4
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_50728| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_17157| Best HMM Match : Kinesin (HMM E-Value=0.59) 28 7.9
SB_19957| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_5674| Best HMM Match : FlaC_arch (HMM E-Value=0.97) 28 7.9
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 279 bits (683), Expect = 2e-75
Identities = 136/187 (72%), Positives = 153/187 (81%)
Frame = -3
Query: 603 CKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXXXXXLDVLEFNQVVIFVKSVQ 424
C K PMEVYVDDE KL HGLQQ+YV LD+LEFNQV+IFVKSVQ
Sbjct: 287 CCKGPLKPMEVYVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDLLEFNQVIIFVKSVQ 346
Query: 423 RCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNI 244
RC AL+ LL QNFPAI IHR M Q+ERL+RYQQFK+F+KR+LVATNLFGRGMDIERVNI
Sbjct: 347 RCTALSHLLLKQNFPAICIHRGMKQEERLARYQQFKNFEKRMLVATNLFGRGMDIERVNI 406
Query: 243 VFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILNQVQDRFDVNITELPEEI 64
VFNYDMPEDSDTYLHRVARAGRFGTKGLAIT +SDE DAK LN+VQDRF+VN+ ELP+EI
Sbjct: 407 VFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQDRFEVNVGELPDEI 466
Query: 63 ELSTYIE 43
++S Y+E
Sbjct: 467 DMS-YVE 472
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 162 bits (394), Expect = 2e-40
Identities = 74/85 (87%), Positives = 82/85 (96%)
Frame = -3
Query: 339 LSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGL 160
L+RYQQFK+F+KR+LVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGL
Sbjct: 2 LARYQQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGL 61
Query: 159 AITMISDENDAKILNQVQDRFDVNI 85
AIT +SDE DAK LN+VQDRF+VN+
Sbjct: 62 AITFVSDEADAKTLNEVQDRFEVNV 86
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 136 bits (329), Expect = 2e-32
Identities = 71/206 (34%), Positives = 113/206 (54%)
Frame = -3
Query: 663 PHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXX 484
P +Q+++ SAT +R +K ++ P E+ + DE L HG+ Q+Y
Sbjct: 225 PENRQILLFSATFPISVRDFKEKHLRKPYEINLMDELTL--HGVTQYYAFVEEKQKVHCL 282
Query: 483 XXXLDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQK 304
L+ NQ +IF SVQR LA+ + + F IH M+Q R + F+
Sbjct: 283 NTLFQKLQINQSIIFCNSVQRVELLARKILELGFSCFYIHARMSQSHRNRVFHDFRQGHC 342
Query: 303 RILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAK 124
R LV ++LF RG+DI+ VN+V N+D P++S+TYLHR+ R+GRFG G+AI +I+ +D
Sbjct: 343 RNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLIT-YDDRF 401
Query: 123 ILNQVQDRFDVNITELPEEIELSTYI 46
L ++++ D I +P I+ Y+
Sbjct: 402 DLYKIENELDTEIKPIPSVIDKKVYV 427
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 136 bits (329), Expect = 2e-32
Identities = 71/206 (34%), Positives = 113/206 (54%)
Frame = -3
Query: 663 PHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXX 484
P +Q+++ SAT +R +K ++ P E+ + DE L HG+ Q+Y
Sbjct: 225 PENRQILLFSATFPISVRDFKEKHLRKPYEINLMDELTL--HGVTQYYAFVEEKQKVHCL 282
Query: 483 XXXLDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQK 304
L+ NQ +IF SVQR LA+ + + F IH M+Q R + F+
Sbjct: 283 NTLFQKLQINQSIIFCNSVQRVELLARKILELGFSCFYIHARMSQSHRNRVFHDFRQGHC 342
Query: 303 RILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAK 124
R LV ++LF RG+DI+ VN+V N+D P++S+TYLHR+ R+GRFG G+AI +I+ +D
Sbjct: 343 RNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLIT-YDDRF 401
Query: 123 ILNQVQDRFDVNITELPEEIELSTYI 46
L ++++ D I +P I+ Y+
Sbjct: 402 DLYKIENELDTEIKPIPSVIDKKVYV 427
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 132 bits (319), Expect = 2e-31
Identities = 65/201 (32%), Positives = 113/201 (56%), Gaps = 1/201 (0%)
Frame = -3
Query: 663 PHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXX 484
P QV++ SATL EI + KFM DP+ + V + +L G++Q +V
Sbjct: 168 PPATQVVLLSATLPHEILEMTSKFMTDPIRILVKRD-ELTLEGIKQFFVAVEREEWKFDT 226
Query: 483 X-XXLDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQ 307
D L Q VIF + ++ L + + + NF +H +M Q ER + + F+ Q
Sbjct: 227 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQ 286
Query: 306 KRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDA 127
R+L++T+++ RG+D+++V++V NYD+P + + Y+HR+ R+GRFG KG+AI + + D
Sbjct: 287 SRVLISTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSD-DI 345
Query: 126 KILNQVQDRFDVNITELPEEI 64
+IL ++ + I E+P +
Sbjct: 346 RILRDIEQYYSTQIDEMPMNV 366
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 102 bits (245), Expect = 2e-22
Identities = 57/203 (28%), Positives = 102/203 (50%)
Frame = -3
Query: 666 TPHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXX 487
T +Q ++ SATL + + + + + +P+ + V L +QQ+ V
Sbjct: 264 TSRARQTLLWSATLPESLERLARSAVLNPITIQVGPGG-LIAPSVQQNVVFLYHYQKPQK 322
Query: 486 XXXXLDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQ 307
L + V++F S+Q + +LL + F A G+H QD R + F+D +
Sbjct: 323 LLETLRTTPYPPVIVFTSSIQNVDYVTELLKQEQFHASGLHSEKPQDYRFKLVKAFRDGK 382
Query: 306 KRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDA 127
ILVAT++ RG+D V V NYD+P+ + Y+HR R GR G G+A + ++ D
Sbjct: 383 VDILVATDVASRGLDFPEVTHVINYDLPDTIECYIHRCGRTGRIGHHGIATSFLT--LDC 440
Query: 126 KILNQVQDRFDVNITELPEEIEL 58
KI ++++ +V +P+E+++
Sbjct: 441 KIAEELKEMLEVMEQPIPKELKM 463
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 97.1 bits (231), Expect = 1e-20
Identities = 51/198 (25%), Positives = 100/198 (50%), Gaps = 6/198 (3%)
Frame = -3
Query: 651 QVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXXXXXL 472
QV++ SAT +++ + + +P+ + + E + + Q + V
Sbjct: 280 QVLLFSATYDEDVMKFAETVVPNPIIIRLRREEESLDNIKQYYVVCKNSEDKFEALCNMY 339
Query: 471 DVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILV 292
VL Q V+F + + LA+ + + + +T ++R++ ++F+ ++++L+
Sbjct: 340 GVLSIGQCVVFCHTRRNAAWLAEKMVKEGHAVALLSGEITIEQRIAVLERFRLGKEKLLI 399
Query: 291 ATNLFGRGMDIERVNIVFNYDMP------EDSDTYLHRVARAGRFGTKGLAITMISDEND 130
TN+ RG+D+E+V +V NYDMP D +TYLHR+ R GRFG G+A+ I +
Sbjct: 400 TTNVSARGIDVEQVTLVINYDMPMDMQGKADFETYLHRIGRTGRFGKSGIAVNFIDGQRS 459
Query: 129 AKILNQVQDRFDVNITEL 76
I+ ++++ F I L
Sbjct: 460 MNIMKKIEEHFGKKIQHL 477
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 97.1 bits (231), Expect = 1e-20
Identities = 42/99 (42%), Positives = 66/99 (66%)
Frame = -3
Query: 360 NMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAG 181
+ TQ +RL ++ K F RIL++T+L RG+D E VN+V N D+P + +TYLHR+ RAG
Sbjct: 247 SQTQAKRLEAMEKLKSFHCRILISTDLTARGIDAENVNLVVNMDVPHNGETYLHRIGRAG 306
Query: 180 RFGTKGLAITMISDENDAKILNQVQDRFDVNITELPEEI 64
RFGT+G+A+T +++ + + L ++ DV + LP I
Sbjct: 307 RFGTEGMAVTYVANGKEERELRDIERSIDVKMELLPAHI 345
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 95.5 bits (227), Expect = 3e-20
Identities = 58/198 (29%), Positives = 93/198 (46%)
Frame = -3
Query: 654 KQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXXXXX 475
+Q +M SAT +EI+ + F+ D + + V ++Q +
Sbjct: 898 RQTLMFSATFPEEIQRLAGDFLNDYLFLTVGRVGGTTSD-IEQTVIEVTDNEKRDRLTQI 956
Query: 474 LDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRIL 295
L ++ ++FV+S + LA L+ + FP IH + Q ER F+ + +L
Sbjct: 957 LGDAGTDRTLVFVESKRSADFLAIFLSGEGFPTTSIHGDRLQQEREEALDDFRKGRCPVL 1016
Query: 294 VATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILN 115
+ATN+ RG+DI+ V V N+D+P D D Y+HR+ R GR G KG A T D K+
Sbjct: 1017 IATNVAARGLDIDDVKHVINFDLPSDIDEYVHRIGRTGRIGNKGKATTFFLRGRDDKVAR 1076
Query: 114 QVQDRFDVNITELPEEIE 61
+ E+PE +E
Sbjct: 1077 GLVKVLSEANQEVPEWLE 1094
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 93.5 bits (222), Expect = 1e-19
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 1/196 (0%)
Frame = -3
Query: 663 PHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXX 484
P +Q ++ SATL+ + + K P V + L Q Y+
Sbjct: 179 PEKRQTLLFSATLTDTMGELQKMSGSQPFSYEVQSDIATVAE-LDQRYLLTPAHVRDCYL 237
Query: 483 XXXLDVLEFNQ-VVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQ 307
L + NQ V++F + + C L + +G+H ++Q ERL+ +FK
Sbjct: 238 VHLLRENDDNQSVIVFTHTCKNCQVLVSMFHKLGLTCVGLHSLLSQGERLAALARFKSGT 297
Query: 306 KRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDA 127
+ILVAT++ RG+DI +V +V N ++P D Y+HRV R R G G+AI+M++ + D
Sbjct: 298 IKILVATDVASRGLDIPQVELVVNSNIPADPKDYIHRVGRTARAGRGGMAISMVT-QYDI 356
Query: 126 KILNQVQDRFDVNITE 79
+ +++++ + +TE
Sbjct: 357 DRVKKIEEKINTKLTE 372
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 89.0 bits (211), Expect = 3e-18
Identities = 46/157 (29%), Positives = 85/157 (54%), Gaps = 1/157 (0%)
Frame = -3
Query: 663 PHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXX 484
P QV++ SAT+ ++ V KFM+D + + V E ++ G++Q +V
Sbjct: 262 PTSVQVVLLSATMPTDVLEVTNKFMRDVVRILVKRE-EVTLEGIKQFFVLVEKEDWKLDT 320
Query: 483 X-XXLDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQ 307
+ L Q VIF + ++ LA +T+++ +H +M+Q ER ++F+
Sbjct: 321 LCDLYETLTITQAVIFANTRRKVDWLAAKMTEKDHTVSSMHGDMSQKERDIIMKEFRSGS 380
Query: 306 KRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHR 196
R+L+ T+L RG+D+ +V++V NYD+P + + Y+HR
Sbjct: 381 SRVLITTDLLARGIDVHQVSLVINYDLPSNRENYIHR 417
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 85.4 bits (202), Expect = 4e-17
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 1/203 (0%)
Frame = -3
Query: 654 KQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXXXXX 475
+Q +M SAT KEI+ + + F+++ + + V + + Q V
Sbjct: 1035 RQTLMFSATFPKEIQMLARDFLENYIFLAVGKVGSTSEN-ITQKVVWVDEFDKRSFLLDL 1093
Query: 474 LDVLEFNQV-VIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRI 298
L+ Q+ ++FV++ + AL L + IH + +Q ER + F+ I
Sbjct: 1094 LNASGPQQLTLVFVETKKGADALEMFLAKDGYYCTSIHGDRSQREREEALRTFRCGDTPI 1153
Query: 297 LVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKIL 118
LVAT + RG+DI V V N+D+P D + Y+HR+ R GR G GLA + + +N +
Sbjct: 1154 LVATAVAARGLDIPNVKHVINFDLPTDIEEYVHRIGRTGRVGHTGLATSFFNHKN-KNVA 1212
Query: 117 NQVQDRFDVNITELPEEIELSTY 49
++ D + + E+P +E Y
Sbjct: 1213 KELMDILEESKQEIPSWLESMAY 1235
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 77.4 bits (182), Expect = 1e-14
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Frame = -3
Query: 663 PHGKQVMMXSATLSKEIRPVCK-KFMQDPMEVYVDDEAKLKX-HGLQQHYVXXXXXXXXX 490
P +Q ++ SAT +K + + K + P+ V VDD + GL+Q Y+
Sbjct: 748 PSKRQTVLFSATQTKNVEDLAKLSLKRSPLYVGVDDHKETSTVEGLEQGYIVVPSEKRFL 807
Query: 489 XXXXXLDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDF 310
L +V++F S ++LL + P + IH Q +R + + +F +
Sbjct: 808 VLFTFLKKNRSKKVMVFFSSCNSVKYHSELLNYIDLPVLEIHGKQKQQKRTTTFFEFCNA 867
Query: 309 QKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKG 163
+ IL+ T++ RG+DI V+ + YD +D Y+HRV R R GT+G
Sbjct: 868 KSGILLCTDVAARGLDIPEVDWIVQYDPADDPKEYIHRVGRTAR-GTEG 915
>SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 77.4 bits (182), Expect = 1e-14
Identities = 34/79 (43%), Positives = 54/79 (68%)
Frame = -3
Query: 282 LFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILNQVQD 103
LF RG+DI+ VN+V N+D P++S+TYLHR+ R+GRFG G+AI +I+ +D L ++++
Sbjct: 2 LFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLIT-YDDRFDLYKIEN 60
Query: 102 RFDVNITELPEEIELSTYI 46
D I +P I+ Y+
Sbjct: 61 ELDTEIKPIPSVIDKKVYV 79
>SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/79 (43%), Positives = 54/79 (68%)
Frame = -3
Query: 282 LFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILNQVQD 103
LF RG+DI+ VN+V N+D P++S+TYLHR+ R+GRFG G+AI +I+ +D L ++++
Sbjct: 2 LFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLIT-YDDRFDLYKIEN 60
Query: 102 RFDVNITELPEEIELSTYI 46
D I +P I+ Y+
Sbjct: 61 ELDTEIKPIPSVIDKKIYV 79
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/89 (35%), Positives = 51/89 (57%)
Frame = -3
Query: 399 LTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPE 220
+ + F A +H Q++R K K ILVAT++ GRG+DI+ V+ V NYDM +
Sbjct: 304 VNQKKFRATTLHGGRNQEQREFALSSLKGGSKDILVATDVAGRGIDIKDVSHVINYDMAK 363
Query: 219 DSDTYLHRVARAGRFGTKGLAITMISDEN 133
+ Y HR+ R GR G G+A++ ++ +
Sbjct: 364 TIEDYTHRIGRTGRAGKTGIAVSFLTQSD 392
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = -3
Query: 357 MTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 178
+ Q +R FK RIL+AT++ RG+DI+ + V NYD P + Y+HRV R GR
Sbjct: 76 LEQYDREQALDDFKTGLARILIATDVASRGLDIKDITYVINYDFPRHIEDYVHRVGRTGR 135
Query: 177 FGTKGLAITMISDEN 133
G G ++T IS E+
Sbjct: 136 AGRSGTSLTFISRED 150
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/107 (27%), Positives = 57/107 (53%)
Frame = -3
Query: 453 QVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFG 274
+ ++F ++ L +L + +H +M Q +RL +FK +L+AT++
Sbjct: 458 RTLVFANTIDCVRRLTSILRLVQLNPLPLHASMQQRQRLKNLDRFKASNTGLLLATDVAA 517
Query: 273 RGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDEN 133
RG+DI + V +Y +P+D + Y+HR R R +GL++ ++ E+
Sbjct: 518 RGLDIANIEHVIHYQVPKDPEVYVHRSGRTARASHEGLSVVLVGPED 564
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 64.9 bits (151), Expect = 6e-11
Identities = 31/95 (32%), Positives = 55/95 (57%)
Frame = -3
Query: 369 IHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVA 190
+H ++ Q +R + F++ + R LVAT++ RG+DI +++V + P+D D Y+HR
Sbjct: 334 LHGDIPQKQREVTLKSFREGKFRCLVATDVAARGLDIPEIDLVVQCEPPKDVDAYIHRSG 393
Query: 189 RAGRFGTKGLAITMISDENDAKILNQVQDRFDVNI 85
R GR G +G+ I + + +L V+ + VNI
Sbjct: 394 RTGRAGREGICIVFYKPQQEG-LLQPVERKAAVNI 427
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 61.7 bits (143), Expect = 5e-10
Identities = 32/86 (37%), Positives = 48/86 (55%)
Frame = -3
Query: 450 VVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGR 271
V+IFV+S R L L IH + TQ +R + + F+ + +L+AT L GR
Sbjct: 386 VLIFVQSKDRAKELFHELIYDGINVDVIHSDRTQAQRDNIVKSFRTGKIWVLIATELMGR 445
Query: 270 GMDIERVNIVFNYDMPEDSDTYLHRV 193
G+D + VN+V NYD P + Y+HR+
Sbjct: 446 GIDFKGVNLVINYDFPTSAVAYIHRI 471
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 60.5 bits (140), Expect = 1e-09
Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 8/189 (4%)
Frame = -3
Query: 663 PHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDE-AKLKX-----HGLQQHYVXXXXX 502
P ++ + SAT + E+ + + +++P+ V V ++ K K LQ Y+
Sbjct: 15 PKQRRTGLFSATQTDEVEALVRAGLRNPVRVTVREKLTKTKNVQRTPSTLQNFYLICRSH 74
Query: 501 XXXXXXXXXLDVLEFNQVVIFVKSVQRCIALAQLLTD--QNFPAIGIHRNMTQDERLSRY 328
L + + ++F + ++ LT N + +H M + R +
Sbjct: 75 EKFSQLVAFLKARKDKKNMVFFSTCACVNYFSKALTKFLPNVHIMALHGKM-KSNRHKIF 133
Query: 327 QQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITM 148
F+ + ILV T++ RG+DI VN V YD P ++ ++HR R R G +G A+
Sbjct: 134 DSFRKLESGILVCTDVMARGVDIPEVNWVIQYDPPSSANAFVHRCGRTARIGNEGNAVVF 193
Query: 147 ISDENDAKI 121
+ D+ +
Sbjct: 194 LLPTEDSYV 202
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/88 (31%), Positives = 50/88 (56%)
Frame = -3
Query: 465 LEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVAT 286
L+ QV+IF + + + L + A+ IH + +Q+ER+ ++F K +LVAT
Sbjct: 85 LDVIQVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVAT 144
Query: 285 NLFGRGMDIERVNIVFNYDMPEDSDTYL 202
++ +G+D + V N+DMPED + Y+
Sbjct: 145 DVASKGLDFPDIQHVINFDMPEDIENYV 172
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/88 (31%), Positives = 50/88 (56%)
Frame = -3
Query: 465 LEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVAT 286
L+ QV+IF + + + L + A+ IH + +Q+ER+ ++F K +LVAT
Sbjct: 85 LDVIQVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVAT 144
Query: 285 NLFGRGMDIERVNIVFNYDMPEDSDTYL 202
++ +G+D + V N+DMPED + Y+
Sbjct: 145 DVASKGLDFPDIQHVINFDMPEDIENYV 172
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 54.4 bits (125), Expect = 8e-08
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Frame = -3
Query: 342 RLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFG--- 172
R R+++F++ ILV T++ RG+D V+ V N+D P Y+HRV R GR
Sbjct: 735 RCERFEKFQNKTADILVCTDIASRGLDTSDVSHVINFDFPNSMVDYIHRVGRTGRVSHVT 794
Query: 171 --TKGLAITMISDENDAKILNQVQDRF 97
A + IS DA++ +Q F
Sbjct: 795 PQVTSRATSFISHNRDARMSRAIQTSF 821
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/85 (29%), Positives = 47/85 (55%)
Frame = -3
Query: 300 ILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKI 121
++ + G M E V+ V N+DMP + Y+H++ RAGR G G +I+ I++ +
Sbjct: 381 VVFVESKLGADMLAEAVSKVINFDMPPTYEEYVHQIGRAGRLGATGWSISFINNASKGLF 440
Query: 120 LNQVQDRFDVNITELPEEIELSTYI 46
L Q+ ++ +LP+E+ S ++
Sbjct: 441 L-QLINKLQPMGVKLPDELTRSAHV 464
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/78 (25%), Positives = 44/78 (56%)
Frame = -3
Query: 369 IHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVA 190
++ ++ Q R +F+ + ++V T++ RG+DI ++ V N+ P + ++HRV
Sbjct: 505 VYSSLDQTARTINVGKFQHKKTMVMVVTDVAARGIDIPMLDNVINFHFPPKAKLFVHRVG 564
Query: 189 RAGRFGTKGLAITMISDE 136
R R G G A ++++++
Sbjct: 565 RVARAGRSGTAYSLVAND 582
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/72 (30%), Positives = 39/72 (54%)
Frame = -3
Query: 387 NFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDT 208
++ A H M+ +R ++F + R + AT FG G+D V + +Y+MP+ ++
Sbjct: 812 SWEAESYHAGMSAAQRRKVQKRFMSGELRAVAATVAFGMGLDKSDVRAIIHYNMPKSFES 871
Query: 207 YLHRVARAGRFG 172
Y+ + RAGR G
Sbjct: 872 YVQEIGRAGRDG 883
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/92 (26%), Positives = 45/92 (48%)
Frame = -3
Query: 447 VIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRG 268
+I+ ++ C +A L+ + A H + D+R Q++ + + ++ AT FG G
Sbjct: 252 IIYCRTRDACQEVASRLSRKGLSAKPYHAGLKSDKRDKVQQEWMEGKVAVICATISFGMG 311
Query: 267 MDIERVNIVFNYDMPEDSDTYLHRVARAGRFG 172
+D V V ++ +P+ + Y RAGR G
Sbjct: 312 VDKGDVRFVAHWSLPQSMEGYYQESGRAGRDG 343
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = -3
Query: 327 QQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITM 148
+ F+ Q ++LV T RG+D + ++ V+ ++P++ + YLH R GR G G A T+
Sbjct: 472 RDFRTGQIQLLVGTEETVRGLDFKELDHVYLMEVPKNVEEYLHLCGRVGRQGRPGTATTV 531
Query: 147 I 145
+
Sbjct: 532 V 532
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = -3
Query: 369 IHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERV 250
+H N+TQ +RL Q+FK+ + ILVAT+L RG+DI V
Sbjct: 38 LHGNLTQLQRLEALQKFKNGEVDILVATDLAARGLDITGV 77
>SB_59278| Best HMM Match : Helicase_C (HMM E-Value=0.00034)
Length = 144
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = -3
Query: 300 ILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKI 121
++ AT FG G+D + V V + MPE + Y RAGR G + E+ KI
Sbjct: 80 VMCATKAFGLGIDQKNVRFVVPHIMPECVEHYYEEAGRAGRDGDPAVCTLYNRFEDRTKI 139
Query: 120 LNQV 109
+N +
Sbjct: 140 MNSI 143
>SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)
Length = 282
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/89 (24%), Positives = 44/89 (49%)
Frame = -3
Query: 327 QQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITM 148
+ F+ Q +LVAT++ G+D+ + N V +D P++ +Y V GR K A +
Sbjct: 138 KMFRKHQINLLVATSVVEEGLDVPKCNFVVRFDFPQNFRSY---VQSKGRARAKNSAFIV 194
Query: 147 ISDENDAKILNQVQDRFDVNITELPEEIE 61
+ ++ D++ +R+ L E+ +
Sbjct: 195 LVEDKDSEWAGLEVERYQETENYLQEKCQ 223
>SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = -3
Query: 318 KDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLA 157
+D R+L+AT FG G+D + V V +Y + + Y+ RAGR G+ +A
Sbjct: 343 QDGTVRLLIATIAFGMGVDCKGVKRVIHYGPSKSVEAYIQETGRAGRDGSNSVA 396
>SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20)
Length = 556
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Frame = -3
Query: 462 EFNQVVIFVKSVQRCIALAQLLTD--QNFPAIGIHRNMTQDERLSRY--QQFKDFQK-RI 298
+ + +I+ KS+ C + ++L++ ++ + + T D + K K R+
Sbjct: 255 QVEKTIIYCKSINACGDIYEVLSENVESKETYAMFHSKTPDSIQKEVLGEFIKSNSKIRV 314
Query: 297 LVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFG 172
+VAT G G+DI V+ + ++ +P + + Y+ + R GR G
Sbjct: 315 VVATCALGMGVDIPDVDHIIHFGIPSEVEHYVQEIGRGGRDG 356
>SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = -3
Query: 273 RGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILNQVQ 106
RG+DI V V D D+ LHRV R R G+ G + I+ ++D +++N ++
Sbjct: 110 RGLDIPNVTHVIQLDFATDAAQMLHRVGRTARAGSHGKVVNFIT-KDDEELVNALR 164
>SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27)
Length = 2056
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/78 (23%), Positives = 38/78 (48%)
Frame = -3
Query: 363 RNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARA 184
+ +T++E++ ++F+ + L+AT + G + VN+V + P +++ R
Sbjct: 1075 KGLTENEKIEVIKKFQSKDAQFLIATEAYQVGTHDDHVNLVCHVGCPRTLTSWVQEFGRG 1134
Query: 183 GRFGTKGLAITMISDEND 130
GR G AI ++ D
Sbjct: 1135 GRAGNNAKAIIYYNEFRD 1152
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 36.3 bits (80), Expect = 0.023
Identities = 32/124 (25%), Positives = 53/124 (42%)
Frame = -3
Query: 645 MMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXXXXXLDV 466
++ SAT K++ +C+ + DP+ V + + ++ L + V
Sbjct: 683 LLFSATFKKKVEHLCRDILVDPVRVVIGELGEMIFLPLHMPLM----------------V 726
Query: 465 LEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVAT 286
+ V+IFV LA L +F +H +M Q ER QFK + ILVAT
Sbjct: 727 ISAGSVLIFVTKKLNSEELATNLRKNDFEVALLHGDMDQFERSKVLGQFKKREIPILVAT 786
Query: 285 NLFG 274
++ G
Sbjct: 787 DVAG 790
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 35.9 bits (79), Expect = 0.030
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -3
Query: 264 DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDEN 133
DI + V N+D P ++ Y+HR+ R R G + T + N
Sbjct: 351 DISDIKFVINFDFPNCTEDYVHRIGRTARSDRTGTSYTFFTVNN 394
>SB_9751| Best HMM Match : Helicase_C (HMM E-Value=3.4e-05)
Length = 798
Score = 35.5 bits (78), Expect = 0.039
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = -3
Query: 279 FGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILNQVQ-D 103
FG G+D V V +Y MP+ + Y RAGR G K I S + +I ++ D
Sbjct: 44 FGMGIDKGDVRYVIHYSMPKSLEGYYQECGRAGRDGKKAECILYYSYGDMHRIRRMIEGD 103
Query: 102 RF--DVNITELPEEIELS 55
+ DV++ L ++ S
Sbjct: 104 KATKDVHMDNLYRVVQFS 121
>SB_58648| Best HMM Match : Helicase_C (HMM E-Value=2.2e-14)
Length = 679
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = -3
Query: 369 IHRNMTQDERLSRYQQFK--DFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHR 196
+H ++ + + + FK D ++LVAT FG G D + V+ ++ ++ + ++
Sbjct: 350 LHSCTPKENKDAILESFKRLDGHVQVLVATIAFGMGRDCKGVHRTIHFGPSKNCEAFIQE 409
Query: 195 VARAGRFG 172
RAGR G
Sbjct: 410 TGRAGRDG 417
>SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -3
Query: 369 IHRNMTQDERLSRYQQFK--DFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHR 196
+H ++ + + + FK D ++LVAT FG G+D + V+ ++ ++ + ++
Sbjct: 206 LHSCTPKENKDAILESFKRLDGHVQVLVATIAFGMGIDCKGVHRTIHFGPSKNCEAFIQE 265
Query: 195 VARAGR 178
RAGR
Sbjct: 266 TGRAGR 271
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 309 QKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 178
+ +++VAT FG G+D V V ++ + + Y RAGR
Sbjct: 352 RSQVVVATVAFGMGIDKSNVRFVIHHSFSKSMENYYQESGRAGR 395
>SB_1038| Best HMM Match : Helicase_C (HMM E-Value=1.1e-10)
Length = 435
Score = 32.3 bits (70), Expect = 0.37
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = -3
Query: 369 IHRNMTQDERLSRYQQFK--DFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHR 196
+H ++ + + + FK D ++LVAT FG G+D + V+ ++ ++ + ++
Sbjct: 237 LHSCTPKENKDAILESFKRLDGHVQVLVATIAFGMGIDCKGVHRTMHFGPSKNCEAFIQE 296
Query: 195 VARAGRFG 172
AGR G
Sbjct: 297 TGHAGRDG 304
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -3
Query: 357 MTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD 229
M+Q E+ ++FK IL+AT++ G+DI+ + V YD
Sbjct: 982 MSQQEQELIIEEFKKGVVNILIATSVAEEGLDIKDCSFVIRYD 1024
>SB_7386| Best HMM Match : Helicase_C (HMM E-Value=0.086)
Length = 100
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = -3
Query: 447 VIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRG 268
+I+ ++ C +A L+ + A H + D+R Q++ + + ++ AT FG G
Sbjct: 34 IIYCRTRDACQEVASRLSRKGLSAKPYHAGLKSDKRDKVQQEWMEGKVAVICATISFGMG 93
Query: 267 MD 262
+D
Sbjct: 94 VD 95
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -3
Query: 663 PHGKQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQ 526
P +Q ++ SAT S +I+ + +K + +P+E+ V LQQ
Sbjct: 32 PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVLQQ 77
>SB_16592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -3
Query: 213 DTYLHRVARAGRFGTKGLAITMI 145
+ Y+ RV RAGR+ G+AITM+
Sbjct: 63 EPYVSRVVRAGRYTVAGVAITMM 85
>SB_26006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 357 MTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHR 196
MT+ RL + +D + + L NL G D+E +++ D P S Y R
Sbjct: 197 MTKVRRLEETMREQDEEIKYLSRPNLNEIGQDVETCDVMIQTDRPSSSPYYEER 250
>SB_1639| Best HMM Match : VWA (HMM E-Value=0)
Length = 812
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 222 EDSDTYLHRVARAGRFGTKGLAITMISDENDAKILNQVQDRFDV-NITELPEEIELSTYI 46
ED++T R +FGT I + +ND + D D+ N++ P ++ + YI
Sbjct: 202 EDTNTIKEASERLRQFGTNLFVIAVGESQNDPSVQAAAGDDTDILNLSSFPVLVQRARYI 261
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -3
Query: 357 MTQDERLSRYQQFKDFQK-RILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAG 181
MTQ E+ +F+ + I++AT + G+DI+ + V YDM + + V G
Sbjct: 599 MTQREQEEVIAKFRAGSECNIIIATTVAEEGLDIDDCSYVIRYDMMGNE---ISSVQSRG 655
Query: 180 RFGTK 166
R TK
Sbjct: 656 RVRTK 660
>SB_50728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 312 SP*IVDSGRDAHPGSYFCGYQWQGSSGQ 395
+P I D G+ + PG FC Y Q SG+
Sbjct: 46 APQIEDHGKTSQPGVRFCFYDVQDDSGK 73
>SB_17157| Best HMM Match : Kinesin (HMM E-Value=0.59)
Length = 2053
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +2
Query: 101 RSCTWFKIL----ASFSSDIIVMARPLVPNLPARATRCRYVSESSG 226
R +W ++ AS+SSDI+++ P N+P C VS SG
Sbjct: 1816 RDASWSTVIVLRDASWSSDIVLLDLPRPRNVPNFRACCALVSALSG 1861
>SB_19957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +1
Query: 154 NGQTFGTKPSCAGDTM*ICI*IFRHVIVEDNVYPFNVHSSAK*VCCNQDPFLEVLELLIA 333
+G T PSC DT+ I + + R ++V+ ++ NV +++ ++D V E+
Sbjct: 148 SGFTLVPNPSCPADTVNILLDVLREIVVDYMLHVRNVKATSSHRSGDEDIRASVAEVSEG 207
Query: 334 GETLILGHIS 363
+L L I+
Sbjct: 208 RLSLALATIA 217
>SB_5674| Best HMM Match : FlaC_arch (HMM E-Value=0.97)
Length = 273
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 312 SP*IVDSGRDAHPGSYFCGYQWQGSSGQ 395
+P I D G+ + PG FC Y Q SG+
Sbjct: 136 APQIEDHGKTSQPGVRFCFYDVQDDSGK 163
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,907,928
Number of Sequences: 59808
Number of extensions: 400961
Number of successful extensions: 864
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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