Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D09
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    89   1e-19
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   5.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.6  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 89.0 bits (211), Expect = 1e-19
 Identities = 54/175 (30%), Positives = 86/175 (49%)
 Frame = -3

Query: 654 KQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHYVXXXXXXXXXXXXXX 475
           +Q +M SAT   EI+ +  KF+ + + V+V          ++Q                 
Sbjct: 359 RQTLMFSATFPAEIQELAGKFLHNYICVFVGIVGGA-CADVEQTIHLVEKFKKRKKLEEI 417

Query: 474 LDVLEFNQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRIL 295
           L+       ++FV++ +    LA L+++  FP   IH +  Q ER      FK  +  +L
Sbjct: 418 LNGGNPKGTLVFVETKRNADYLASLMSETQFPTTSIHGDRLQREREMALYDFKSGRMDVL 477

Query: 294 VATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDEND 130
           +AT++  RG+DI+ VN V NYD+P+  D Y+HR+ R GR G KG A +    E D
Sbjct: 478 IATSVAARGLDIKNVNHVVNYDLPKSIDDYVHRIGRTGRVGNKGRATSFYDPEAD 532


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = -3

Query: 654  KQVMMXSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKXHGLQQHY 520
            +Q ++  A     I    K+      + + D+ A L  HG +QH+
Sbjct: 983  QQHLLRDAESWSRICEAAKRITASLQQAWDDERAALAAHGNEQHF 1027


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 344 SSWVIFLWIPMAGKFWSV 397
           SS +IF+WI   G+ WSV
Sbjct: 84  SSGIIFVWIKYEGR-WSV 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,824
Number of Sequences: 2352
Number of extensions: 13880
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)