Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D07
         (409 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g51540.1 68418.m06391 peptidase M3 family protein / thimet ol...    28   2.8  
At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ...    28   2.8  
At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ...    27   4.8  
At1g11730.1 68414.m01346 galactosyltransferase family protein co...    27   6.4  
At1g21100.1 68414.m02639 O-methyltransferase, putative similar t...    26   8.5  

>At5g51540.1 68418.m06391 peptidase M3 family protein / thimet
           oligopeptidase family protein low similarity to
           SP|Q99797 Mitochondrial intermediate peptidase,
           mitochondrial precursor (EC 3.4.24.59) {Homo sapiens};
           contains Pfam profile PF01432: Peptidase family M3
          Length = 860

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 177 NFKCAYASYCFGKFWSNIVWESCC*E 100
           N+   Y SY + K +++ +W+S C E
Sbjct: 624 NYGAGYYSYLYAKCFASTIWQSICEE 649


>At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ
           domain-containing protein contains Pfam domain, PF00023:
           Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
          Length = 491

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 361 HLHRQDPVQQVHHHH 317
           H H QDP    HHHH
Sbjct: 473 HHHHQDPSTMYHHHH 487


>At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ
           domain-containing protein contains Pfam domain, PF00023:
           Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
          Length = 467

 Score = 27.1 bits (57), Expect = 4.8
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 373 GRCVHLHRQDPVQQVHHHH 317
           G  +H H  DP    HHHH
Sbjct: 446 GMNLHHHHHDPSTMYHHHH 464


>At1g11730.1 68414.m01346 galactosyltransferase family protein
           contains Pfam profile: PF01762 galactosyltransferase
          Length = 384

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 183 NQNFKCAYASYCFGKFWSNIVWESCC*ERGI 91
           N  F    AS+C G F++N +W      RGI
Sbjct: 20  NSVFFMCLASFCLGMFFTNRMWNIVPEARGI 50


>At1g21100.1 68414.m02639 O-methyltransferase, putative similar to
           GI:2781394
          Length = 373

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = -3

Query: 269 VWTKKYKNKSEVPPFVSA-EIIERSKSEARIKISNVLM--LLTALASFGAILSGKAAAKR 99
           V+   Y   S    F+S  EI  +  +  R   + VL+  +L  LAS+  +  GKA + +
Sbjct: 50  VFDTLYAAASRTDSFLSPYEIASKLPTTPRNPEAPVLLDRMLRLLASYSMVKCGKALSGK 109

Query: 98  GESVHQ 81
           GE V++
Sbjct: 110 GERVYR 115


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,361,735
Number of Sequences: 28952
Number of extensions: 128110
Number of successful extensions: 351
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 351
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 605614832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)