Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D05
         (793 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    26   0.30 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   0.92 
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    23   3.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.9  

>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 9/115 (7%)
 Frame = -3

Query: 458 LLLAENVDEKIYKSAQDICLEIGTMFQIQ--DDFIDCFGDEIKTGKVGTDIQERKCTWLA 285
           +LLA + + ++    Q I  ++  +FQ Q  D+ +   GD +       ++QE K    A
Sbjct: 10  MLLANHKNVQVGDLVQKIAQKLQVLFQDQIVDEMVTVLGD-LHRKPTYNNLQEMKYLERA 68

Query: 284 VQALQRCTEAQRTV-------FKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEK 141
           ++   R   +   +       F  C G   P        +Y+  H P IY   EK
Sbjct: 69  IKESLRLYPSVHFISRKLGEDFVTCNGLKLPKSTITHLHIYDLHHNPDIYPDPEK 123


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 14/70 (20%), Positives = 28/70 (40%)
 Frame = +3

Query: 132 VHRFFLMLVYLREVKVFVKSFYAFHMCWFTATITGFEYCTLCFSTALQRLNCQPSTFALL 311
           V  F  + ++L    ++V S  +    W+    T  E CT   ST  +  +  P+     
Sbjct: 3   VGSFTFLAIWLYLTAIYVSSRKSDSGIWYWQCNTDEETCTRISSTVSRNTDTYPTLETCR 62

Query: 312 YICTNFTSFY 341
            +C  + + +
Sbjct: 63  LVCGKYGALW 72


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/38 (23%), Positives = 20/38 (52%)
 Frame = -3

Query: 449 AENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIK 336
           A+ V + +YK+ QD   ++   +  +  ++    DE+K
Sbjct: 85  AKTVIQHLYKNKQDWWKQLEAKYDPEHTYVKAHEDELK 122


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = +3

Query: 3   TGIVSHLLXYC-LMLPIVRNIQQLFKENAGGLYCYIFNLSYNIVVHRFFLMLVYL 164
           T ++ H+     L L   R+I +  K      +  I+  +YNIV       +VY+
Sbjct: 7   TDVLKHVWFLSKLFLLCPRSIDEKIKRQERHSFYKIYKYTYNIVAVSLTAYMVYI 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,796
Number of Sequences: 336
Number of extensions: 4082
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)