Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_D05
(793 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0411 + 29151647-29151790,29152974-29153039,29153398-291535... 117 9e-27
05_06_0265 - 26759960-26760088,26760315-26760386,26760457-267605... 116 2e-26
04_04_1432 - 33558895-33559023,33559215-33559286,33559405-335594... 108 4e-24
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515... 87 1e-17
01_06_0363 - 28745581-28745709,28746043-28746114,28746373-287464... 59 5e-09
07_03_1039 - 23454130-23454552,23454859-23455536 34 0.11
03_02_0236 + 6666104-6666202,6666530-6666832,6667476-6667550,666... 29 4.2
08_02_0370 - 16333471-16333526,16333821-16333912,16334553-163346... 29 5.6
01_02_0098 - 11087875-11089110,11091744-11092022 28 7.4
07_03_1258 + 25244863-25245282,25246419-25246568,25246665-252468... 28 9.8
>01_06_0411 +
29151647-29151790,29152974-29153039,29153398-29153538,
29153638-29153724,29153968-29154084,29154177-29154265,
29154510-29154561,29154667-29154762,29154835-29154879,
29155002-29155091,29155164-29155235,29155490-29155618
Length = 375
Score = 117 bits (282), Expect = 9e-27
Identities = 55/139 (39%), Positives = 86/139 (61%)
Frame = -3
Query: 458 LLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQ 279
LL EN+D + ++I +E+GT FQ+QDD++DC+GD GK+GTDI++ KC+WL VQ
Sbjct: 238 LLSGENLDN--FGDVKNILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQ 295
Query: 278 ALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIT 99
AL+R E Q+ + YG +P V ++K LY++L+L ++ E+ Y+ +I IE
Sbjct: 296 ALERADENQKHILFENYGKPDPECVAKVKDLYKELNLEAVFHEYERESYNKLIADIEAHP 355
Query: 98 IEAARVLFKKLLDITYNRQ 42
+A + + K L Y RQ
Sbjct: 356 NKAVQNVLKSFLHKIYKRQ 374
Score = 55.6 bits (128), Expect = 4e-08
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = -2
Query: 762 RGMPCWYRRPEVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQ 583
RG PCW+R P+VG+ A D +++ + + +F+ Y+ + +LFNE ++T+ GQ
Sbjct: 136 RGQPCWFRVPQVGL-IAVNDGIILRNHISRILQRHFKGKLYYVDLIDLFNEVEFKTASGQ 194
Query: 582 HLDHVTGNR-KTDYSSFTL 529
LD +T + + D + + L
Sbjct: 195 LLDLITTHEGEKDLTKYNL 213
>05_06_0265 -
26759960-26760088,26760315-26760386,26760457-26760546,
26760649-26760693,26760785-26760880,26760980-26761031,
26761209-26761297,26761388-26761504,26761680-26761737,
26761834-26761936,26762027-26762051,26762677-26762826
Length = 341
Score = 116 bits (280), Expect = 2e-26
Identities = 55/138 (39%), Positives = 82/138 (59%)
Frame = -3
Query: 455 LLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQA 276
LL D Y + +DI +++G FQ+QDD++DC+GD GK+GTDI++ KC+WL VQA
Sbjct: 203 LLLSGEDLTKYGAVEDILVKMGIYFQVQDDYLDCYGDPKFIGKIGTDIEDYKCSWLVVQA 262
Query: 275 LQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENITI 96
L+R E+Q++V YG +PA V ++K LY +L+L ++ E Y +I IE
Sbjct: 263 LERADESQKSVLFENYGKKDPACVAKVKSLYRELNLEAVFLDYENESYKKLIADIEAQPS 322
Query: 95 EAARVLFKKLLDITYNRQ 42
A + + K L Y RQ
Sbjct: 323 IAVQNVLKSFLHKIYKRQ 340
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -2
Query: 714 AFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQHLDHVT 565
A D +++ + + +FR Y + +LFNE ++T+ GQ LD +T
Sbjct: 117 AINDGIILRNHITRMLRLHFRGKLYYADLLDLFNEVEFKTASGQLLDLIT 166
>04_04_1432 -
33558895-33559023,33559215-33559286,33559405-33559494,
33559574-33559618,33559693-33559788,33559905-33559956,
33560044-33560132,33560226-33560342,33560448-33560534,
33560646-33560761,33560854-33560878,33561816-33562121
Length = 407
Score = 108 bits (260), Expect = 4e-24
Identities = 49/128 (38%), Positives = 75/128 (58%)
Frame = -3
Query: 425 YKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRT 246
Y +++ +E+G FQIQDD++DCFGD GKVGTDI++ KC+WL VQA++ E +
Sbjct: 279 YVELKNVLIEMGVYFQIQDDYLDCFGDPEVIGKVGTDIEDYKCSWLIVQAMELANENEMK 338
Query: 245 VFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENITIEAARVLFKKL 66
+ YG S+P V +K +Y +L L I+ E +Y +++ I+ T A R + K
Sbjct: 339 ILYENYGKSDPKCVAEVKSVYRELDLQDIFLEYESRVYKHLVSTIDAETDRAIRDILKSF 398
Query: 65 LDITYNRQ 42
L Y R+
Sbjct: 399 LKKIYRRK 406
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = -2
Query: 750 CWYRRPEVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQHLDH 571
CWY+ P VG++ A D +L+ + F+ ++ + EL+NE +T+MGQ LD
Sbjct: 172 CWYKLPTVGMS-AINDGVLLKCHVQAIIKRYFKEKFYFLDLMELWNEIGLQTAMGQMLDL 230
Query: 570 VT 565
+T
Sbjct: 231 IT 232
>04_04_1431 -
33551127-33551300,33551362-33551433,33551508-33551597,
33551671-33551715,33551785-33551880,33552245-33552296,
33552412-33552500,33552590-33552887,33553007-33553109,
33553328-33553352,33553503-33553763
Length = 434
Score = 87.4 bits (207), Expect = 1e-17
Identities = 52/153 (33%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Frame = -3
Query: 455 LLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQA 276
LL + + +DI +E+G FQIQDD++DCF D GK+GTDI++ KC+WL VQA
Sbjct: 281 LLLSGAKLEDFSGLKDILIEMGIYFQIQDDYLDCFADPNTIGKIGTDIEDHKCSWLIVQA 340
Query: 275 LQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHL--------------PQ-IYKHQEK 141
L Q V YG + + V +KR Y L L PQ I+ E+
Sbjct: 341 LGHADNNQIEVLHRNYGKKDSSSVSEVKRTYAALDLKIWAIDLADCEFCPPQDIFSEFER 400
Query: 140 AMYDNIIRQIENITIEAARVLFKKLLDITYNRQ 42
Y++++ IE AAR + L + R+
Sbjct: 401 RCYNHLVTSIEAQKDHAAREILISFLKKIHQRK 433
>01_06_0363 -
28745581-28745709,28746043-28746114,28746373-28746417,
28746523-28746618,28747029-28747080,28747232-28747305,
28747386-28747502,28747844-28747930,28748186-28748281,
28748508-28748654
Length = 304
Score = 58.8 bits (136), Expect = 5e-09
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = -2
Query: 762 RGMPCWYRRPEVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQ 583
RG PCW+R P+VG+ A D L++ S + FR Y+ + +LFNE +T+ GQ
Sbjct: 100 RGKPCWFRLPKVGL-IAINDGLVLRSQISRIFRRYFRGKSYYVDLLDLFNEVEIQTTSGQ 158
Query: 582 HLDHVTGN 559
LD +T N
Sbjct: 159 LLDQITTN 166
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/74 (35%), Positives = 38/74 (51%)
Frame = -3
Query: 266 CTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENITIEAA 87
C + K YG S+PA V ++K LY +LHL +++ E+ Y+ +I IE EA
Sbjct: 229 CFGEPEIIGKENYGKSDPACVAKVKDLYNELHLQRVFSEYERESYEKLISAIEAQPNEAV 288
Query: 86 RVLFKKLLDITYNR 45
R + K L Y R
Sbjct: 289 RAVLKSFLHKIYKR 302
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = -3
Query: 458 LLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK 327
LL E++D Y + I +E+G FQ QDD++DCFG+ GK
Sbjct: 197 LLFDESLDN--YAQVKHILVEMGVYFQSQDDYLDCFGEPEIIGK 238
>07_03_1039 - 23454130-23454552,23454859-23455536
Length = 366
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 464 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWL 288
+G +L DE+I +S + IG +FQ+ DD +D + GK G D+ K T+
Sbjct: 262 IGAILGGGSDEQI-ESLRMYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYP 320
Query: 287 AVQALQRCTE 258
+ L++ E
Sbjct: 321 KLLGLEKSRE 330
>03_02_0236 +
6666104-6666202,6666530-6666832,6667476-6667550,
6668329-6668367,6668905-6668923,6669796-6669852,
6670432-6670559,6670644-6670712,6671116-6671201,
6671285-6671394,6672060-6672110,6672602-6672660,
6672953-6672997,6673132-6673206,6673314-6673430
Length = 443
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -1
Query: 559 SKNRLFFIYSGSLLH--YYKIQGRILHLQFTRXPWVYY-WLKMWMK 431
SK+R+ + S+++ YYKI G+ + F VYY WL + +K
Sbjct: 89 SKSRIMLVDGTSVMYRSYYKILGKCFLILFVTSVLVYYVWLLLLIK 134
>08_02_0370 -
16333471-16333526,16333821-16333912,16334553-16334671,
16335152-16335226,16335328-16335393,16335507-16335563,
16335640-16335689,16335774-16335944,16337057-16337183,
16337658-16338017
Length = 390
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = -3
Query: 464 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLA 285
L +++ E + + +++ + T++Q+ + ID G E+K ++ IQE C L
Sbjct: 215 LPIIVLEMPSVLLMAAIRNVHIARPTIYQVVKEMIDKMGYEVKLVRINKRIQEAYCAELF 274
Query: 284 VQALQRCTEA 255
+ + TE+
Sbjct: 275 LTKVGDHTES 284
>01_02_0098 - 11087875-11089110,11091744-11092022
Length = 504
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/62 (27%), Positives = 35/62 (56%)
Frame = -3
Query: 275 LQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENITI 96
++R E+ ++ FK C S ++ +K+L + L QI++ E + +++ +I NI I
Sbjct: 298 VKRIWESLKSAFKKCTNRSYLVMLKALKKLDDFDTLQQIFQEWESS-HEHYDMKIPNIII 356
Query: 95 EA 90
+A
Sbjct: 357 QA 358
>07_03_1258 +
25244863-25245282,25246419-25246568,25246665-25246877,
25246979-25247068,25247311-25247424,25247881-25248150,
25248251-25248407,25248691-25248741,25248742-25248819,
25249357-25249457,25249832-25250002,25250136-25250210,
25251527-25251793
Length = 718
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 294 STFALLYICTNFTSFYFIT 350
STF L+Y+ +F SF+FIT
Sbjct: 467 STFGLVYLIYSFCSFHFIT 485
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,263,839
Number of Sequences: 37544
Number of extensions: 381472
Number of successful extensions: 795
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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