Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_D05
(793 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81106-1|CAB03221.2| 352|Caenorhabditis elegans Hypothetical pr... 100 1e-21
AF068713-9|AAC17800.1| 284|Caenorhabditis elegans Serpentine re... 30 2.2
Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 29 3.8
Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 29 3.8
Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical p... 29 3.8
U80443-7|AAB37678.2| 393|Caenorhabditis elegans Coenzyme q (ubi... 29 3.8
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ... 29 3.8
AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 29 3.8
Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical p... 28 6.7
Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical p... 28 6.7
Z81039-8|CAB02779.2| 225|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z73973-5|CAA98267.2| 882|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 8.8
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 8.8
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 28 8.8
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 28 8.8
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 28 8.8
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 8.8
>Z81106-1|CAB03221.2| 352|Caenorhabditis elegans Hypothetical
protein R06C1.2 protein.
Length = 352
Score = 100 bits (240), Expect = 1e-21
Identities = 54/142 (38%), Positives = 82/142 (57%), Gaps = 7/142 (4%)
Frame = -3
Query: 506 NTRPHITPTIYPFXLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK 327
N H T +P + L++++ + + S + + +IG +FQ QDDF+D +GD TGK
Sbjct: 191 NKTSHYT-VFHPIQMALIISDVL--AYHGSVKKVAYQIGFLFQSQDDFLDVYGDPKITGK 247
Query: 326 VGTDIQERKCTWLAVQALQRCTEAQR-------TVFKACYGSSEPAHVERIKRLYEDLHL 168
+GTDIQ+ KCTWLAV+ALQ+ + FK +GS +P VE+IKR+Y++L L
Sbjct: 248 IGTDIQDGKCTWLAVRALQKMHKTPEKWGAKLIEEFKTSFGSVDPEKVEKIKRIYDELQL 307
Query: 167 PQIYKHQEKAMYDNIIRQIENI 102
Q ++ EK I + I I
Sbjct: 308 KQEFRRFEKHFSGEIKKSISEI 329
Score = 44.4 bits (100), Expect = 9e-05
Identities = 26/80 (32%), Positives = 44/80 (55%)
Frame = -2
Query: 762 RGMPCWYRRPEVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQ 583
RG PCW+RR VG++ A D+ ++ S + + + N ++ E + ++ +T +GQ
Sbjct: 109 RGKPCWFRREGVGMS-AINDAFIMDSFVEDILRLALPGHVNLDRLCEAYRKSKQKTLIGQ 167
Query: 582 HLDHVTGNRKTDYSSFTLDR 523
LD + N+ SSFT DR
Sbjct: 168 FLDTSSVNQ---ISSFTWDR 184
>AF068713-9|AAC17800.1| 284|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 68 protein.
Length = 284
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 24 LXYCLMLPIVRNIQQLFKENAGGLYC-YIFNLSYNIVVHRFFLMLVYLREVKVFVKSFYA 200
L L+L I + + FK Y + ++ Y+I + F L ++ + ++F +
Sbjct: 22 LNLILLLAIFCSKRVTFKSELSLFYTRFAADIGYSISISNFKLYILAVMISEIFAVKNFI 81
Query: 201 FHMCWFTATITGFEYCTLCFSTALQRLNCQPSTFALLYICTN 326
F W T I G +L F T L R+ S F + C N
Sbjct: 82 FITLWLT-IIFGIIRTSLLFLTTLDRV---ISLFFPFFYCAN 119
>Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -1
Query: 373 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 227
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 481 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 528
>Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -1
Query: 373 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 227
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 481 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 528
>Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical
protein ZK632.1b protein.
Length = 516
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -1
Query: 373 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 227
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 187 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 234
>U80443-7|AAB37678.2| 393|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 455 LLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQ 309
+LA+ D K+++ A + +G FQ+ DD +D + GK V D++
Sbjct: 256 ILADGSDLKLHEIAFEYGRNLGIAFQLADDLLDFIATADEMGKPVAADLK 305
>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
protein Y42A5A.1 protein.
Length = 1045
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 45 PIVRNIQQLFKENAGGLYCYIFNLSYNIVVHRFFLMLVYLREVKVFV 185
PI N +L LY +I N ++ + + + + L+Y E+K+FV
Sbjct: 124 PIFTNSTELITTTEDPLYVHINNTNHRLQIPQIHIPLLYEVELKLFV 170
>AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication
licensing factor MCM2/3/5-type protein protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -1
Query: 373 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 227
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 481 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 528
>Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical
protein C50B6.14b protein.
Length = 420
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 206 VERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENI 102
+ER +R+ +DLHL I K DNI++ IE++
Sbjct: 383 LERQQRMQKDLHLLYIAPLVAKTPKDNIVQIIEDV 417
>Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical
protein C50B6.14a protein.
Length = 399
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 206 VERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENI 102
+ER +R+ +DLHL I K DNI++ IE++
Sbjct: 362 LERQQRMQKDLHLLYIAPLVAKTPKDNIVQIIEDV 396
>Z81039-8|CAB02779.2| 225|Caenorhabditis elegans Hypothetical
protein C25D7.10 protein.
Length = 225
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +3
Query: 207 MCWFTATITGFEYCTLCFSTALQRLNCQPSTFALLYICTNFTSFYFITEAVYEIVLNLEH 386
+ +F+ I L F T L P +L I T+ + F+ +I+L++
Sbjct: 125 LVYFSCFIIFMNTGQLVFYTLQNYLVLTPLKMLILLIATSSLNSIFL-----QILLSIFV 179
Query: 387 RSYFQANVLSRFINFFIH 440
YF+ LS I+F+IH
Sbjct: 180 FPYFEVVTLSTIISFYIH 197
>Z73973-5|CAA98267.2| 882|Caenorhabditis elegans Hypothetical
protein F25D1.4 protein.
Length = 882
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 39 MLPIVRNIQQLFKENAGGL--YCYIFNLSYNIVVHRFFLMLVYLREVKVFVKSFYAFHMC 212
M+P+VRN+QQL E + IF +S N H + + R + F+ FY++
Sbjct: 435 MIPVVRNVQQLADELQLFVKEASEIFGVSDNF--HDVKCLSLDGRTYESFINQFYSYEPT 492
Query: 213 W 215
W
Sbjct: 493 W 493
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 648 NPNYIKMFELFNETLWRTSMGQHLDHVTGNRKTDY 544
+P+Y+++ ELF + + RT G L N K DY
Sbjct: 2318 SPSYVEIVELFEKNMARTFGGTSLAPRYVNTKVDY 2352
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 648 NPNYIKMFELFNETLWRTSMGQHLDHVTGNRKTDY 544
+P+Y+++ ELF + + RT G L N K DY
Sbjct: 2902 SPSYVEIVELFEKNMARTFGGTSLAPRYVNTKVDY 2936
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 648 NPNYIKMFELFNETLWRTSMGQHLDHVTGNRKTDY 544
+P+Y+++ ELF + + RT G L N K DY
Sbjct: 2318 SPSYVEIVELFEKNMARTFGGTSLAPRYVNTKVDY 2352
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 648 NPNYIKMFELFNETLWRTSMGQHLDHVTGNRKTDY 544
+P+Y+++ ELF + + RT G L N K DY
Sbjct: 2902 SPSYVEIVELFEKNMARTFGGTSLAPRYVNTKVDY 2936
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical protein
T23F2.2b protein.
Length = 1538
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 215 PAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENITIEAARVLFKK 69
P + +I+ L ++L + + QE AMY+ I +IE E V+FKK
Sbjct: 1444 PNYDRQIELLQDELDI----RRQESAMYEKKITEIEEERKEMYLVMFKK 1488
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical protein
T23F2.2a protein.
Length = 1534
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 215 PAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENITIEAARVLFKK 69
P + +I+ L ++L + + QE AMY+ I +IE E V+FKK
Sbjct: 1440 PNYDRQIELLQDELDI----RRQESAMYEKKITEIEEERKEMYLVMFKK 1484
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/58 (25%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Frame = -3
Query: 206 VERIKRLYEDLH-----LPQIYKHQEKAMYD-NIIRQIENITIEAARVLFKKLLDITY 51
VE+I+ + ++L L Q+ + K + D N ++++ T+ + + + ++LLD+TY
Sbjct: 444 VEQIENIEDELRQKPEQLNQLSVYASKQVNDLNEMKEVLKTTVNSRKAILQRLLDVTY 501
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 648 NPNYIKMFELFNETLWRTSMGQHLDHVTGNRKTDY 544
+P+Y+++ ELF + + RT G L N K DY
Sbjct: 2902 SPSYVEIVELFEKNMARTFGGTSLAPRYVNTKVDY 2936
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,945,140
Number of Sequences: 27780
Number of extensions: 366298
Number of successful extensions: 1030
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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