Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_D05
(793 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g17190.2 68417.m02585 farnesyl pyrophosphate synthetase 2 (FP... 116 2e-26
At4g17190.1 68417.m02586 farnesyl pyrophosphate synthetase 2 (FP... 116 2e-26
At5g47770.1 68418.m05901 farnesyl pyrophosphate synthetase 1, mi... 114 5e-26
At3g32040.1 68416.m04072 geranylgeranyl pyrophosphate synthase, ... 36 0.031
At3g14550.1 68416.m01843 geranylgeranyl pyrophosphate synthase, ... 33 0.16
At2g40990.1 68415.m05063 zinc finger (DHHC type) family protein ... 33 0.16
At3g29430.1 68416.m03697 geranylgeranyl pyrophosphate synthase, ... 33 0.29
At3g14510.1 68416.m01837 geranylgeranyl pyrophosphate synthase, ... 32 0.50
At4g36810.1 68417.m05221 geranylgeranyl pyrophosphate synthase (... 31 1.2
At4g02570.1 68417.m00351 cullin family protein similar to cullin... 31 1.2
At2g23800.1 68415.m02842 geranylgeranyl pyrophosphate synthase (... 30 1.5
At2g18620.1 68415.m02168 geranylgeranyl pyrophosphate synthase, ... 30 1.5
At3g21210.1 68416.m02680 universal stress protein (USP) family p... 29 2.7
At3g14530.1 68416.m01841 geranylgeranyl pyrophosphate synthase, ... 29 2.7
At5g56360.1 68418.m07034 calmodulin-binding protein similar to a... 29 3.5
At1g49530.1 68414.m05551 geranylgeranyl pyrophosphate synthase (... 29 3.5
At1g78510.1 68414.m09151 solanesyl diphosphate synthase (SPS) id... 28 6.2
At3g56920.1 68416.m06331 zinc finger (DHHC type) family protein ... 28 8.2
At2g26330.1 68415.m03159 leucine-rich repeat protein kinase, put... 28 8.2
At1g02020.2 68414.m00122 nitroreductase family protein contains ... 28 8.2
At1g02020.1 68414.m00121 nitroreductase family protein contains ... 28 8.2
>At4g17190.2 68417.m02585 farnesyl pyrophosphate synthetase 2 (FPS2)
/ FPP synthetase 2 / farnesyl diphosphate synthase 2
identical to SP|Q43315 Farnesyl pyrophosphate synthetase
2 (FPP synthetase 2) (FPS 2) (Farnesyl diphosphate
synthetase 2) [Includes: Dimethylallyltransferase (EC
2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)]
{Arabidopsis thaliana}
Length = 247
Score = 116 bits (279), Expect = 2e-26
Identities = 54/145 (37%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
Frame = -3
Query: 473 PFXLGLLLA-ENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKC 297
P LL+A EN++ + + + +++G FQ+QDD++DCF D GK+GTDI++ KC
Sbjct: 104 PVACALLMAGENLEN--HTDVKTVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKC 161
Query: 296 TWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIR 117
+WL V+AL+RC+E Q + YG +EP++V ++K LY++L L + EK Y+ + +
Sbjct: 162 SWLVVKALERCSEEQTKILYENYGKAEPSNVAKVKALYKELDLEGAFMEYEKESYEKLTK 221
Query: 116 QIENITIEAARVLFKKLLDITYNRQ 42
IE +A + + K L Y RQ
Sbjct: 222 LIEAHQSKAIQAVLKSFLAKIYKRQ 246
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -2
Query: 762 RGMPCWYRRPEVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQ 583
RG PCW+R+P+VG+ A D +L+ + + +FR P Y+ + +LFNE ++T+ GQ
Sbjct: 8 RGQPCWFRKPKVGMI-AINDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEFQTACGQ 66
Query: 582 HLDHVTG-NRKTDYSSFTL 529
+D +T + + D S ++L
Sbjct: 67 MIDLITTFDGEKDLSKYSL 85
>At4g17190.1 68417.m02586 farnesyl pyrophosphate synthetase 2 (FPS2)
/ FPP synthetase 2 / farnesyl diphosphate synthase 2
identical to SP|Q43315 Farnesyl pyrophosphate synthetase
2 (FPP synthetase 2) (FPS 2) (Farnesyl diphosphate
synthetase 2) [Includes: Dimethylallyltransferase (EC
2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)]
{Arabidopsis thaliana}
Length = 342
Score = 116 bits (279), Expect = 2e-26
Identities = 54/145 (37%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
Frame = -3
Query: 473 PFXLGLLLA-ENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKC 297
P LL+A EN++ + + + +++G FQ+QDD++DCF D GK+GTDI++ KC
Sbjct: 199 PVACALLMAGENLEN--HTDVKTVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKC 256
Query: 296 TWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIR 117
+WL V+AL+RC+E Q + YG +EP++V ++K LY++L L + EK Y+ + +
Sbjct: 257 SWLVVKALERCSEEQTKILYENYGKAEPSNVAKVKALYKELDLEGAFMEYEKESYEKLTK 316
Query: 116 QIENITIEAARVLFKKLLDITYNRQ 42
IE +A + + K L Y RQ
Sbjct: 317 LIEAHQSKAIQAVLKSFLAKIYKRQ 341
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -2
Query: 762 RGMPCWYRRPEVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQ 583
RG PCW+R+P+VG+ A D +L+ + + +FR P Y+ + +LFNE ++T+ GQ
Sbjct: 103 RGQPCWFRKPKVGMI-AINDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEFQTACGQ 161
Query: 582 HLDHVTG-NRKTDYSSFTL 529
+D +T + + D S ++L
Sbjct: 162 MIDLITTFDGEKDLSKYSL 180
>At5g47770.1 68418.m05901 farnesyl pyrophosphate synthetase 1,
mitochondrial (FPS1) / FPP synthetase 1 / farnesyl
diphosphate synthase 1 identical to SP|Q09152 Farnesyl
pyrophosphate synthetase 1, mitochondrial precursor (FPP
synthetase 1) (FPS 1) (Farnesyl diphosphate synthetase
1) [Includes: Dimethylallyltransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] {Arabidopsis
thaliana}
Length = 384
Score = 114 bits (275), Expect = 5e-26
Identities = 53/145 (36%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Frame = -3
Query: 473 PFXLGLLLA-ENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKC 297
P LL+A EN++ I +++ +++G FQ+QDD++DCF D GK+GTDI++ KC
Sbjct: 241 PVACALLMAGENLENHI--DVKNVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKC 298
Query: 296 TWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIR 117
+WL V+AL+RC+E Q + YG +P++V ++K LY++L L ++ E Y+ +
Sbjct: 299 SWLVVKALERCSEEQTKILYENYGKPDPSNVAKVKDLYKELDLEGVFMEYESKSYEKLTG 358
Query: 116 QIENITIEAARVLFKKLLDITYNRQ 42
IE +A + + K L Y RQ
Sbjct: 359 AIEGHQSKAIQAVLKSFLAKIYKRQ 383
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = -2
Query: 762 RGMPCWYRRPEVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQ 583
RG PCW+R P+VG+ A D +L+ + + +FR P Y+ + +LFNE +T+ GQ
Sbjct: 145 RGQPCWFRVPQVGMV-AINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQ 203
Query: 582 HLDHVT 565
+D +T
Sbjct: 204 MIDLIT 209
>At3g32040.1 68416.m04072 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative identical to
gi:413730; similar to GB:P34802 from [Arabidopsis
thaliana] (Plant Physiol. 104 (4), 1469-1470 (1994))
Length = 360
Score = 35.9 bits (79), Expect = 0.031
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = -3
Query: 464 LGLLLAENVDEKIYKSAQ-DICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTW 291
LG ++ +E+I K + C IG +FQ+ DD ID + GK G D+ RK T+
Sbjct: 256 LGAIIGGGTEEEIQKLRKYGRC--IGLLFQVVDDIIDVTESTEELGKTAGKDVMARKLTY 313
Query: 290 LAVQALQRCTE 258
+ L+R E
Sbjct: 314 PRLIGLERSRE 324
>At3g14550.1 68416.m01843 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to SP|Q43133
Geranylgeranyl pyrophosphate synthetase, chloroplast
precursor (GGPP synthetase) (GGPS) [Includes:
Dimethylallyltransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10);
Farnesyltranstransferase (EC 2.5.1.29)] {Sinapis alba};
contains Pfam profile PF00348: Polyprenyl synthetase
Length = 360
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 464 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWL 288
LG+++ +E+I K + IG +FQ+ DD +D + GK G D+ K T+
Sbjct: 256 LGVIMGGGTEEEIEK-LRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYP 314
Query: 287 AVQALQRCTE 258
+ L+R E
Sbjct: 315 RLIGLERSKE 324
>At2g40990.1 68415.m05063 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 386
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 93 LYCYIFNLSYNIVVHRFFLMLVYLREVKVFVKSFYAFHMCWFTATITGFEYCTLC 257
LY ++F+ + VH L++V ++ V Y F + WF +T F +C
Sbjct: 192 LYVFVFSWVSMLEVHGKMLLMVITNDLVFVVLILYCFVVVWFVGGLTVFHLYLIC 246
>At3g29430.1 68416.m03697 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to gi:413730;
similar to geranylgeranyl pyrophosphate synthase,
chloroplast precursor GB:P34802 from [Arabidopsis
thaliana]
Length = 357
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -3
Query: 464 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWL 288
LG ++ +E+I K + IG +FQ+ DD +D + GK G D+ K T+
Sbjct: 253 LGAIMGGGTEEEIEK-LRKYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMAGKLTYP 311
Query: 287 AVQALQRCTE 258
+ L+R E
Sbjct: 312 RLIGLERSRE 321
>At3g14510.1 68416.m01837 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to
gi:9294375; similar to geranylgeranyl pyrophosphate
synthetase GB:P34802 [Arabidopsis thaliana]
Length = 284
Score = 31.9 bits (69), Expect = 0.50
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -3
Query: 464 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWL 288
+G ++ +E+I K + IG +FQ+ DD +D + GK G D+ K T+
Sbjct: 180 IGAIMGGGTEEEIEK-LRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYP 238
Query: 287 AVQALQRCTE 258
+ L+R E
Sbjct: 239 RLIGLERSRE 248
>At4g36810.1 68417.m05221 geranylgeranyl pyrophosphate synthase
(GGPS1) / GGPP synthetase / farnesyltranstransferase
identical to GI:413730 to geranylgeranyl pyrophosphate
synthase, chloroplast precursor GB:P34802 from
[Arabidopsis thaliana] synonymous with
farnesyltranstransferase
Length = 371
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -3
Query: 464 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWL 288
LG ++ D++I + + IG +FQ+ DD +D + GK G D+ K T+
Sbjct: 267 LGAIVGGGSDDEIER-LRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYP 325
Query: 287 AVQALQRCTE 258
+ L++ E
Sbjct: 326 KIMGLEKSRE 335
>At4g02570.1 68417.m00351 cullin family protein similar to cullin 3
[Homo sapiens] GI:3639052; contains Pfam profile
PF00888: Cullin family
Length = 738
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = -3
Query: 446 ENVDEKIYKSAQDICLEIGT--MFQIQDDFIDCFGDEIKT---GKVGTDIQERKCTWLAV 282
E +D + K+ DI +EIG M + ++DF + + K + IQE C +
Sbjct: 163 EQIDRALLKNVLDIYVEIGMGQMERYEEDFESFMLQDTSSYYSRKASSWIQEDSCPDYML 222
Query: 281 QALQRCTEAQRTVFKACYGSSEPAHVERIK 192
++ + + + V + SSEP VE+++
Sbjct: 223 KSEECLKKERERVAHYLHSSSEPKLVEKVQ 252
>At2g23800.1 68415.m02842 geranylgeranyl pyrophosphate synthase
(GGPS2) (GGPS5) / GGPP synthetase /
farnesyltranstransferase identical to GB:U44876;
sequence disagrees at N-Terminus, sequence submitted has
been confirmed from three electropherograms.
Length = 376
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = -3
Query: 464 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWL 288
LG ++ DE+I +S + IG +FQ+ DD +D + GK G D K T+
Sbjct: 272 LGAIIGGGSDEEI-ESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYP 330
Query: 287 AVQALQRCTEAQRTVFK 237
+ L++ E + + K
Sbjct: 331 KLIGLEKSKEFVKRLTK 347
>At2g18620.1 68415.m02168 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to gi:413730
to geranylgeranyl pyrophosphate synthase, chloroplast
precursor GB:P34802 from [Arabidopsis thaliana]
synonymous with farnesyltranstransferase
Length = 347
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 464 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWL 288
LG ++ DE++ K + IG +FQ+ DD +D + GK G D+ K T+
Sbjct: 243 LGAIVGGGSDEEVEKLRR-FARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYP 301
Query: 287 AVQALQR 267
+ L++
Sbjct: 302 KLMGLEK 308
>At3g21210.1 68416.m02680 universal stress protein (USP) family
protein / DC1 domain-containing protein contains Pfam
profiles PF03107: DC1 domain, PF00582: universal stress
protein family
Length = 686
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 204 HMCWFTATITGFEYCTLCFSTALQRLNCQPSTFALLYIC 320
H + T E+C++C RLNC FAL + C
Sbjct: 539 HPIYLIHESTAQEFCSICGQLIGHRLNCGECRFALCFGC 577
>At3g14530.1 68416.m01841 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to SP|P34802
Geranylgeranyl pyrophosphate synthetase, chloroplast
precursor (GGPP synthetase) (GGPS) [Includes:
Dimethylallyltransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10);
Farnesyltranstransferase (EC 2.5.1.29)] {Arabidopsis
thaliana}; contains Pfam profile PF00348: Polyprenyl
synthetase
Length = 360
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -3
Query: 464 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWL 288
LG+++ +++I K + IG +FQ+ DD +D + GK G D+ K T+
Sbjct: 256 LGVIMGGGTEQEIEK-LRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYP 314
Query: 287 AVQALQRCTE 258
+ L+ E
Sbjct: 315 RLIGLEGSRE 324
>At5g56360.1 68418.m07034 calmodulin-binding protein similar to
alpha glucosidase II beta subunit from GI:2104691 [Mus
musculus]
Length = 647
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = -3
Query: 437 DEKIYKSAQDICLEIG----TMFQIQDDFIDC 354
DEK YKS+ +I + G T Q+ DDF DC
Sbjct: 44 DEKYYKSSSEIKCKDGSKKFTKAQLNDDFCDC 75
>At1g49530.1 68414.m05551 geranylgeranyl pyrophosphate synthase
(GGPS6) / GGPP synthetase / farnesyltranstransferase
identical to gi:2578821; similar to geranyl geranyl
pyrophosphate synthase GI:2578822 from [Arabidopsis
thaliana]
Length = 336
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -3
Query: 464 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWL 288
+G ++ DE+I + + +G MFQ+ DD +D + GK G D+ K T+
Sbjct: 232 VGAIMGGGSDEEIER-LKSYARCVGLMFQVMDDVLDETKSSEELGKTAGKDLITGKLTYP 290
Query: 287 AVQALQRCTE 258
V + E
Sbjct: 291 KVMGVDNARE 300
>At1g78510.1 68414.m09151 solanesyl diphosphate synthase (SPS)
identical to solanesyl diphosphate synthase [Arabidopsis
thaliana] GI:19911233; contains Pfam profile PF00348:
Polyprenyl synthetase
Length = 406
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -3
Query: 461 GLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWLA 285
G + V+ + + + +G FQI DD +D + GK G+D+ + T
Sbjct: 268 GAAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTAPV 327
Query: 284 VQALQR 267
+ AL+R
Sbjct: 328 IFALER 333
>At3g56920.1 68416.m06331 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 338
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +3
Query: 93 LYCYIFNLSYNIVVHRFFLMLVYLREVKVFVKSFYAFHMCWFTATITGFEYCTLC 257
+Y ++F+ + VH F + V ++ + V Y F WF +T F + +C
Sbjct: 199 IYVFVFSWVSMLKVHGEFYV-VLADDLILGVLGLYCFVSVWFVGGLTVFHFYLIC 252
>At2g26330.1 68415.m03159 leucine-rich repeat protein kinase,
putative (ERECTA) identical to uncharacterized receptor
protein kinase ERECTA [Arabidopsis thaliana]
gi|1389566|dbj|BAA11869; contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 976
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 614 LKSSNIFI*LGLVLKLVXXNSNKELCIKRESXKAHVMPTSG 736
+KSSNI + L +L K LC+ + +VM T G
Sbjct: 774 VKSSNILLDKDLEARLTDFGIAKSLCVSKSHTSTYVMGTIG 814
>At1g02020.2 68414.m00122 nitroreductase family protein contains
Pfam PF00881: nitroreductase family protein profile;
contains Prosite PS00343: Gram-positive cocci surface
proteins 'anchoring' hexapeptide
Length = 543
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = -2
Query: 705 DSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQH---LDHVTGNRKTDYSSF 535
D L I S+L +F + NPN + L + ++RT+ L + T + D +SF
Sbjct: 333 DYLAISSALRDFPSLEWTGNPNTLSKEHLCWDIIYRTAKAVEKPPLIYSTSSSSIDVASF 392
Query: 534 TLDR 523
T R
Sbjct: 393 TSSR 396
>At1g02020.1 68414.m00121 nitroreductase family protein contains
Pfam PF00881: nitroreductase family protein profile;
contains Prosite PS00343: Gram-positive cocci surface
proteins 'anchoring' hexapeptide
Length = 642
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = -2
Query: 705 DSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQH---LDHVTGNRKTDYSSF 535
D L I S+L +F + NPN + L + ++RT+ L + T + D +SF
Sbjct: 333 DYLAISSALRDFPSLEWTGNPNTLSKEHLCWDIIYRTAKAVEKPPLIYSTSSSSIDVASF 392
Query: 534 TLDR 523
T R
Sbjct: 393 TSSR 396
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,538,118
Number of Sequences: 28952
Number of extensions: 324031
Number of successful extensions: 808
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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