Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_D04
(606 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 349 2e-97
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 347 1e-96
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 146 2e-36
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 79 5e-16
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.13
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.13
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.40
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 29 0.70
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 0.92
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.2
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 26 3.7
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 3.7
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 4.9
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 26 4.9
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 6.5
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 25 6.5
SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces... 25 8.6
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 25 8.6
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 349 bits (857), Expect = 2e-97
Identities = 153/193 (79%), Positives = 173/193 (89%)
Frame = -3
Query: 604 NVDLTEFQXNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR 425
NVDL EFQ NLVPYPRIHFPLVTY+P++SA KA+HE SV EITN CFEP NQMVKCDPR
Sbjct: 253 NVDLNEFQTNLVPYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPR 312
Query: 424 HGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDL 245
G+YMA C+LYRGDV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI Y+PP VPG +
Sbjct: 313 TGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGI 372
Query: 244 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL 65
AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAAL
Sbjct: 373 AKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAAL 432
Query: 64 EKDYEEVGMDSAE 26
E+DYEEVG DS +
Sbjct: 433 ERDYEEVGQDSMD 445
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 347 bits (852), Expect = 1e-96
Identities = 154/193 (79%), Positives = 171/193 (88%)
Frame = -3
Query: 604 NVDLTEFQXNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR 425
NVDL EFQ NLVPYPRIHFPLVTYAP++SA KA+HE SV EITN CFEP NQMVKCDPR
Sbjct: 249 NVDLAEFQTNLVPYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPR 308
Query: 424 HGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDL 245
G+YMA C+LYRGDV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI +PP + G ++
Sbjct: 309 AGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEI 368
Query: 244 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL 65
AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAAL
Sbjct: 369 AKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAAL 428
Query: 64 EKDYEEVGMDSAE 26
E+DYEEVG DS E
Sbjct: 429 ERDYEEVGQDSME 441
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 146 bits (354), Expect = 2e-36
Identities = 72/196 (36%), Positives = 114/196 (58%), Gaps = 3/196 (1%)
Frame = -3
Query: 604 NVDLTEFQXNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR 425
N DL + N+VP+PR+HF +V +AP+ + + + +SV E+T F+ N MV DPR
Sbjct: 247 NSDLRKLAVNMVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAADPR 306
Query: 424 HGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDL 245
HG+Y+ L+RG V K+V+ I +++TK + FV+W P + PP DL
Sbjct: 307 HGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK-----DL 361
Query: 244 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDL 74
+ + + N+T+I E + RL +F M+ ++AF+HWY GEGM+E EF+EA DL
Sbjct: 362 ---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 418
Query: 73 AALEKDYEEVGMDSAE 26
+ + Y+E G+D +
Sbjct: 419 VSEYQQYQEAGIDEGD 434
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 79.0 bits (186), Expect = 5e-16
Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 7/192 (3%)
Frame = -3
Query: 604 NVDLTEFQXNLVPYPRIHFPLVTYAPVISA---EKAYHEQLSVAEITNACFEPANQMVKC 434
N DL +L+P PR HF L +Y P + E + +V ++ P NQMV
Sbjct: 250 NNDLVSIIASLIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSV 309
Query: 433 DP-RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 257
+P + +++ + +G+ P DV+ ++ I+ +R F+ W P +V ++ + P +
Sbjct: 310 NPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKT 369
Query: 256 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEFSEA 86
++ + ML+N T+IA + R ++D + + AF+ Y E + E EF +
Sbjct: 370 NHRVSGL-----MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEFDSS 424
Query: 85 REDLAALEKDYE 50
R+ +A L +YE
Sbjct: 425 RDVVADLINEYE 436
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.1 bits (67), Expect = 0.13
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = -1
Query: 522 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPS 343
S+P+ P P S + P P + S VV P + RP++P
Sbjct: 513 SVPQPPAAPVVPEAPSVHQPPAAPV-----APEVPSAPQRPAAPVVPEAPSVPQRPAVPV 567
Query: 342 KPSVLSNSSTGVQPVSRSVSTTSHPPWCP 256
P LS V PV+ V + PP P
Sbjct: 568 VPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
Score = 25.4 bits (53), Expect = 6.5
Identities = 23/90 (25%), Positives = 31/90 (34%)
Frame = -1
Query: 522 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPS 343
S+P+RP + P S P P + +A S P+ P P
Sbjct: 558 SVPQRPAVPVVPEALSVPQPPVAPVA--PEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPE 615
Query: 342 KPSVLSNSSTGVQPVSRSVSTTSHPPWCPE 253
PSV + V P + SV P PE
Sbjct: 616 VPSVPQRPAVPVVPEAPSVPQPPAAPVVPE 645
Score = 25.0 bits (52), Expect = 8.6
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = -1
Query: 390 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 256
VV P + RP++P P S PV V + PP P
Sbjct: 642 VVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVP 686
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.1 bits (67), Expect = 0.13
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
Frame = -1
Query: 585 SRXTWCLTPVSTSHWSRTRQSSLPRRPTM--NSFPSPRSQTHASSPPTRW*NATPVMAST 412
S T C T S T S+ P PT+ S +P + T+ ++ + +TPV ++
Sbjct: 388 STSTSCTTSTSIPP---TGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTP 444
Query: 411 WLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHP 268
CT TS P T + S P +N +T S TS P
Sbjct: 445 LATTNCTTSTSVPY--TSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTP 490
Score = 29.5 bits (63), Expect = 0.40
Identities = 29/105 (27%), Positives = 49/105 (46%)
Frame = -1
Query: 588 SSRXTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTW 409
S+ + TPV++S++ T SS P T P + T+ ++ + +TPV ++
Sbjct: 499 STSVPYTSTPVTSSNY--TISSSTPVTST------PVTTTNCTTSTSVLYTSTPVTSTPL 550
Query: 408 LAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 274
CT TS P T P S ++ S++ PV+ + TTS
Sbjct: 551 ATTNCTTSTSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTS 594
Score = 29.1 bits (62), Expect = 0.53
Identities = 27/107 (25%), Positives = 48/107 (44%)
Frame = -1
Query: 594 SPSSRXTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMAS 415
+P+ T TP++T++ T +S+P T + +P + T+ ++ + +TPV ++
Sbjct: 410 TPTVPPTSSSTPLTTTNC--TTSTSVPYTSTPVT-STPLATTNCTTSTSVPYTSTPVTST 466
Query: 414 TWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 274
CT TS P T + S P +N +T S TS
Sbjct: 467 PLTTTNCTTSTSIPY--TSTPVTSTPLTTTNCTTSTSVPYTSTPVTS 511
Score = 25.8 bits (54), Expect = 4.9
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Frame = -1
Query: 564 TPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVV 385
TP++T++ T +S+P T + +P + T+ ++ + +TPV +S + T V
Sbjct: 466 TPLTTTNC--TTSTSIPYTSTPVT-STPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPV 522
Query: 384 TSYPRM*TRPSLPSKPSVLSNSSTGVQ-PVSRSVSTTS 274
TS P T + + SVL S+ P++ + TTS
Sbjct: 523 TSTPV--TTTNCTTSTSVLYTSTPVTSTPLATTNCTTS 558
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.5 bits (63), Expect = 0.40
Identities = 26/94 (27%), Positives = 46/94 (48%)
Frame = -1
Query: 594 SPSSRXTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMAS 415
S SS + + STS + T SS RP +S S +H SS ++ ++ PV ++
Sbjct: 364 SSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKS-SSAPVSSA 422
Query: 414 TWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSST 313
+ + +S+ + SL SKP + ++SS+
Sbjct: 423 FYHNSTSSRSSSHSSSHSLSSLSSKPILTASSSS 456
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.7 bits (61), Expect = 0.70
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 350 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGKLFMVGLLGRDDW 529
S G +LGY ++ A++V+A + V HL+ G D + K G D
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK-------GLDML 459
Query: 530 RVRDQWEVDTGVR 568
R Q+E++ G++
Sbjct: 460 VDRVQYELEAGLQ 472
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 0.92
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -3
Query: 478 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 353
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -1
Query: 591 PSSRXTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTR 445
P+++ P S + T +SS+P P N+ PSP S + AS+ P R
Sbjct: 1232 PTAKAPPVPAPSSEAPSVSTPRSSVPS-PHSNASPSPTSSSMASAAPAR 1279
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 528 QSSLPRRPTMNSFPSPRSQTHASSPPTR 445
+ SLPRRP+ +P S T ++ PP +
Sbjct: 738 RGSLPRRPSSALLTNPISITKSNPPPVK 765
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -1
Query: 354 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 268
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 4.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 373 WVRRHHGTAYSKPCTCHDGG 432
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 4.9
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 567 LTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMAS 415
LTP + S +S + +S +R ++N+ PS + +H+SS T + PV+++
Sbjct: 130 LTPKNPSLFSSSNAAS--QRGSLNTAPSNFAYSHSSSLQTSASSRPPVLSN 178
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -1
Query: 357 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 262
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 25.4 bits (53), Expect = 6.5
Identities = 22/84 (26%), Positives = 36/84 (42%)
Frame = -1
Query: 561 PVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVT 382
P+ SH S + S+ R + + H S PT+ +AT + S AV T
Sbjct: 253 PLDASHLSSQQLLSMYRDQVSHGVTPSTFRNHESFMPTQLVSATELSKSVDNAVLPIPPT 312
Query: 381 SYPRM*TRPSLPSKPSVLSNSSTG 310
+ P + P S P + S +++G
Sbjct: 313 TAPAV-VSPPASSFPLMSSAATSG 335
>SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 476
Score = 25.0 bits (52), Expect = 8.6
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -1
Query: 375 PRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPP 265
PR LP K VL T + VSR TTS P
Sbjct: 293 PRPLLNSKLPRKTLVLDLDETLIHSVSRGSRTTSGQP 329
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.0 bits (52), Expect = 8.6
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = -1
Query: 435 ATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 256
+TP ++S A VV+S T + S S ++SS P S SVS W P
Sbjct: 245 STPAVSSA-AASSSAVVSSVVSSATSVAASSTISSATSSSASASPTSSSVSGKRGLAWIP 303
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,625,664
Number of Sequences: 5004
Number of extensions: 56082
Number of successful extensions: 228
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 266270664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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