Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D03
         (500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    30   0.010
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    30   0.010
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   0.67 
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   2.0  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   2.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   4.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   4.7  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   8.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.2  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 0.010
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +3

Query: 378 YFNVVLSKTWCTISDHHSLTISEMPFXI 461
           Y  +VL +TW ++S +H + ISE+ F +
Sbjct: 189 YLTIVLGETWTSLSVYHLVEISEIHFDL 216


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 30.3 bits (65), Expect = 0.010
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +3

Query: 378 YFNVVLSKTWCTISDHHSLTISEMPFXI 461
           Y  +VL +TW ++S +H + ISE+ F +
Sbjct: 185 YLTIVLGETWTSLSVYHLVEISEIHFDL 212


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 24.2 bits (50), Expect = 0.67
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +1

Query: 241 VFEMVKMLFKCVDYGSQ*NKILILSWHLK 327
           +F+++ + F+C     + NK   L +H+K
Sbjct: 147 IFDLIFLSFRCTKLCKEANKTAFLWYHIK 175


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 464 YNXKRHFRDGQ 432
           YN K +FRDGQ
Sbjct: 25  YNSKAYFRDGQ 35


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 464 YNXKRHFRDGQA 429
           Y+ K HFR GQA
Sbjct: 30  YDSKSHFRQGQA 41


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 493 RNYNLMGKLCIIXKGISEMVKL 428
           +  N + K+C +   +S++VKL
Sbjct: 497 KQLNTLNKICALHHHLSKLVKL 518


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 493 RNYNLMGKLCIIXKGISEMVKL 428
           +  N + K+C +   +S++VKL
Sbjct: 222 KQLNTLNKICALHHHLSKLVKL 243


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 428 VMIRDGAPC 402
           V++RDG PC
Sbjct: 123 VLVRDGKPC 131


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +3

Query: 369 KQIYFNVVLSKTWCTI 416
           ++ YF +  +KT+CT+
Sbjct: 394 RETYFRLSKTKTFCTL 409


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,705
Number of Sequences: 336
Number of extensions: 2060
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)