Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D03
         (500 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0467 - 14366969-14367742,14368335-14368754,14370339-143704...    30   0.91 
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199...    27   8.5  

>05_03_0467 -
           14366969-14367742,14368335-14368754,14370339-14370496,
           14370571-14370664,14371536-14371649,14371794-14371985,
           14372095-14372176,14372280-14372471,14372773-14373371
          Length = 874

 Score = 30.3 bits (65), Expect = 0.91
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -2

Query: 367 AYHSVMITVMKRSILNAMIKLIFYFTE 287
           AYHS+ +T+ +  +LN +IK+I Y  +
Sbjct: 302 AYHSIAVTLGRAGLLNELIKIIEYMRQ 328


>03_06_0353 - 33317015-33318235,33318567-33318824,33319587-33319904,
            33319949-33320011,33320103-33320496,33320684-33320796,
            33320932-33321639,33321667-33323199,33323395-33323607,
            33323718-33324700,33324890-33325423,33325694-33325820,
            33326083-33326162,33327347-33327377,33327949-33328053,
            33328119-33328124,33328349-33328985,33329144-33329478,
            33330394-33331113
          Length = 2792

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = +1

Query: 256  KMLFK-CVDYGSQ*N--KILILSWHLKYFSSSLLSLHYDTLSKF 378
            K++++  + YG+  N  K+ ++SW L Y    +  +H DT   F
Sbjct: 2300 KVIYREAIFYGTVDNREKVTVISWLLPYMQRYIYKMHRDTYVNF 2343


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,569,293
Number of Sequences: 37544
Number of extensions: 164181
Number of successful extensions: 205
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)